; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10008912 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008912
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationChr06:684569..687042
RNA-Seq ExpressionHG10008912
SyntenyHG10008912
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145982.2 pentatricopeptide repeat-containing protein At2g13600 isoform X1 [Cucumis sativus]1.9e-15687.91Show/hide
Query:  MLRVSSSFGTWKHNRWKACLELFPTLCKGLHTENSNVISTNICISRHVRNGHLDLARTLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCNNIK
        + R SSS GTWKHNRWKACLELF TLC+GLHTENSN+ISTNI ISRHVR+GHLDLA+TLFNEMPVRSVVSWNIMISGYSK GKYSEALNLAS MHCNN+K
Subjt:  MLRVSSSFGTWKHNRWKACLELFPTLCKGLHTENSNVISTNICISRHVRNGHLDLARTLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCNNIK

Query:  LNETTFSTLLSICAHSGCTSEGKQFHCLVLKSGLQIFELVGSALLYMYANINDISGAKQVFDELHDKNDLLWSLMLVGYVKCNLMDDAFDLFMKIPKRDV
        LNETTFS+LLSICAHSGC+SEGKQFHCLVLKSGLQIFE VGSAL+Y YANINDISGAKQVFDELHDKNDLLW L+LVGYVKCNLMDDA DLFMKIP RDV
Subjt:  LNETTFSTLLSICAHSGCTSEGKQFHCLVLKSGLQIFELVGSALLYMYANINDISGAKQVFDELHDKNDLLWSLMLVGYVKCNLMDDAFDLFMKIPKRDV

Query:  VAWTTLISGYARSEHNCKKALELFCSMWMNGEVEPNEFTFDCVLRACGRMRDLSQGKVVHGILTKYGFHFDHSICSALILFYCQCEAIDNAKAVYDS---
        VAWTT+IS YARSEHNCK+ LELFCSM MNGEVEPNEFTFD V+RACGRMR LS GKVVHGILTKYGFHFDHS+CSALILFYCQCEAIDNAKAVYDS   
Subjt:  VAWTTLISGYARSEHNCKKALELFCSMWMNGEVEPNEFTFDCVLRACGRMRDLSQGKVVHGILTKYGFHFDHSICSALILFYCQCEAIDNAKAVYDS---

Query:  PNKKAS
        P  KAS
Subjt:  PNKKAS

XP_016898853.1 PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like [Cucumis melo]9.1e-15989.22Show/hide
Query:  MLRVSSSFGTWKHNRWKACLELFPTLCKGLHTENSNVISTNICISRHVRNGHLDLARTLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCNNIK
        MLR SSS GTWKHNRWKACLELF TLC+GLHTENSN+ISTN  ISRHVRNGHLDLARTLFNEMPVRSVVSWNIMISGYSK GKYSEALNLASGMHCNN+K
Subjt:  MLRVSSSFGTWKHNRWKACLELFPTLCKGLHTENSNVISTNICISRHVRNGHLDLARTLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCNNIK

Query:  LNETTFSTLLSICAHSGCTSEGKQFHCLVLKSGLQIFELVGSALLYMYANINDISGAKQVFDELHDKNDLLWSLMLVGYVKCNLMDDAFDLFMKIPKRDV
        LNETTFS+LLSICAHSGC+SEGKQFHCLVLKSGLQIFE VGSALLY+YANINDISGAKQVFDELHDKNDLLW LMLVGYVKCNLMDDAFDLF KIP  DV
Subjt:  LNETTFSTLLSICAHSGCTSEGKQFHCLVLKSGLQIFELVGSALLYMYANINDISGAKQVFDELHDKNDLLWSLMLVGYVKCNLMDDAFDLFMKIPKRDV

Query:  VAWTTLISGYARSEHNCKKALELFCSMWMNGEVEPNEFTFDCVLRACGRMRDLSQGKVVHGILTKYGFHFDHSICSALILFYCQCEAIDNAKAVYDS---
        V+WTT+ISGYARSEHNCK+ LELFCSM MNG VEPNEFTFD V+RACGRMRDLS GKVVHGILTKYGFHFDHS+CSALILFYCQCEAID+AKAVYDS   
Subjt:  VAWTTLISGYARSEHNCKKALELFCSMWMNGEVEPNEFTFDCVLRACGRMRDLSQGKVVHGILTKYGFHFDHSICSALILFYCQCEAIDNAKAVYDS---

Query:  PNKKAS
        P  KAS
Subjt:  PNKKAS

XP_023534728.1 putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic [Cucurbita pepo subsp. pepo]3.6e-15587.21Show/hide
Query:  MLRVSSSFGTWKHNRWKACLELFPTLCKGLHTENSNVISTNICISRHVRNGHLDLARTLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCNNIK
        M+RVSS FGTWKHNRWKACL+LFP+ CK LHTENS ++STNICISRHVRNGHLDLA+TLF+EMPVRSVVSWNIMISGYSK+G+YSEAL LASGMHC+N+K
Subjt:  MLRVSSSFGTWKHNRWKACLELFPTLCKGLHTENSNVISTNICISRHVRNGHLDLARTLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCNNIK

Query:  LNETTFSTLLSICAHSGCTSEGKQFHCLVLKSGLQIFELVGSALLYMYANINDISGAKQVFDELHDKNDLLWSLMLVGYVKCNLMDDAFDLFMKIPKRDV
        LNE TFSTLLSICAHSGCT EGKQ+HCLVL+SGLQIFELVGSALLY YAN +DI+GAK VFDELHDKNDLLWSLMLVGYVKCNLMDDAFDLF KIP RDV
Subjt:  LNETTFSTLLSICAHSGCTSEGKQFHCLVLKSGLQIFELVGSALLYMYANINDISGAKQVFDELHDKNDLLWSLMLVGYVKCNLMDDAFDLFMKIPKRDV

Query:  VAWTTLISGYARSEHNCKKALELFCSMWMNGEVEPNEFTFDCVLRACGRMRDLSQGKVVHGILTKYGFHFDHSICSALILFYCQCEAIDNAKAVYDS
        VAWTTLISGYARSEHNC++ALELFCSM+ NGEVEPNEFTFDCV+RACGR+R LSQGKVVHGILTKYGFHFDHSIC ALILFYCQCEA+D AK VYDS
Subjt:  VAWTTLISGYARSEHNCKKALELFCSMWMNGEVEPNEFTFDCVLRACGRMRDLSQGKVVHGILTKYGFHFDHSICSALILFYCQCEAIDNAKAVYDS

XP_031741075.1 pentatricopeptide repeat-containing protein At2g13600 isoform X2 [Cucumis sativus]2.2e-15788.56Show/hide
Query:  MLRVSSSFGTWKHNRWKACLELFPTLCKGLHTENSNVISTNICISRHVRNGHLDLARTLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCNNIK
        MLR SSS GTWKHNRWKACLELF TLC+GLHTENSN+ISTNI ISRHVR+GHLDLA+TLFNEMPVRSVVSWNIMISGYSK GKYSEALNLAS MHCNN+K
Subjt:  MLRVSSSFGTWKHNRWKACLELFPTLCKGLHTENSNVISTNICISRHVRNGHLDLARTLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCNNIK

Query:  LNETTFSTLLSICAHSGCTSEGKQFHCLVLKSGLQIFELVGSALLYMYANINDISGAKQVFDELHDKNDLLWSLMLVGYVKCNLMDDAFDLFMKIPKRDV
        LNETTFS+LLSICAHSGC+SEGKQFHCLVLKSGLQIFE VGSAL+Y YANINDISGAKQVFDELHDKNDLLW L+LVGYVKCNLMDDA DLFMKIP RDV
Subjt:  LNETTFSTLLSICAHSGCTSEGKQFHCLVLKSGLQIFELVGSALLYMYANINDISGAKQVFDELHDKNDLLWSLMLVGYVKCNLMDDAFDLFMKIPKRDV

Query:  VAWTTLISGYARSEHNCKKALELFCSMWMNGEVEPNEFTFDCVLRACGRMRDLSQGKVVHGILTKYGFHFDHSICSALILFYCQCEAIDNAKAVYDS---
        VAWTT+IS YARSEHNCK+ LELFCSM MNGEVEPNEFTFD V+RACGRMR LS GKVVHGILTKYGFHFDHS+CSALILFYCQCEAIDNAKAVYDS   
Subjt:  VAWTTLISGYARSEHNCKKALELFCSMWMNGEVEPNEFTFDCVLRACGRMRDLSQGKVVHGILTKYGFHFDHSICSALILFYCQCEAIDNAKAVYDS---

Query:  PNKKAS
        P  KAS
Subjt:  PNKKAS

XP_038874558.1 pentatricopeptide repeat-containing protein At2g13600-like [Benincasa hispida]1.9e-16493.94Show/hide
Query:  MLRVSSSFGTWKHNRWKACLELFPTLCKGLHTENSNVISTNICISRHVRNGHLDLARTLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCNNIK
        MLRVSSSFGTWKHNRWKACL+L PTLCKGLHTENSN+ISTNICISRHV NGHLDLA TLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCNN+K
Subjt:  MLRVSSSFGTWKHNRWKACLELFPTLCKGLHTENSNVISTNICISRHVRNGHLDLARTLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCNNIK

Query:  LNETTFSTLLSICAHSGCTSEGKQFHCLVLKSGLQIFELVGSALLYMYANINDISGAKQVFDELHDKNDLLWSLMLVGYVKCNLMDDAFDLFMKIPKRDV
        LNETTFSTLLSICA SGCTSEGKQFHCL+LKSGLQIFELVGSALLY+YANINDISGAKQVFDELHDKNDLLWSLMLVGYVKCNLMDDAF LF K P RDV
Subjt:  LNETTFSTLLSICAHSGCTSEGKQFHCLVLKSGLQIFELVGSALLYMYANINDISGAKQVFDELHDKNDLLWSLMLVGYVKCNLMDDAFDLFMKIPKRDV

Query:  VAWTTLISGYARSEHNCKKALELFCSMWMNGEVEPNEFTFDCVLRACGRMRDLSQGKVVHGILTKYGFHFDHSICSALILFYCQCEAIDNAKAVYDS
        VAWTTLISGYARSEHNCK+ALELFCSM MNGEVEPNEFTFDCV+RACGRMRDLS+GKVVHGILTKYGFHFDHSICSALILFYCQCEAID AKAVYDS
Subjt:  VAWTTLISGYARSEHNCKKALELFCSMWMNGEVEPNEFTFDCVLRACGRMRDLSQGKVVHGILTKYGFHFDHSICSALILFYCQCEAIDNAKAVYDS

TrEMBL top hitse value%identityAlignment
A0A0A0KQ79 Uncharacterized protein1.1e-15788.56Show/hide
Query:  MLRVSSSFGTWKHNRWKACLELFPTLCKGLHTENSNVISTNICISRHVRNGHLDLARTLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCNNIK
        MLR SSS GTWKHNRWKACLELF TLC+GLHTENSN+ISTNI ISRHVR+GHLDLA+TLFNEMPVRSVVSWNIMISGYSK GKYSEALNLAS MHCNN+K
Subjt:  MLRVSSSFGTWKHNRWKACLELFPTLCKGLHTENSNVISTNICISRHVRNGHLDLARTLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCNNIK

Query:  LNETTFSTLLSICAHSGCTSEGKQFHCLVLKSGLQIFELVGSALLYMYANINDISGAKQVFDELHDKNDLLWSLMLVGYVKCNLMDDAFDLFMKIPKRDV
        LNETTFS+LLSICAHSGC+SEGKQFHCLVLKSGLQIFE VGSAL+Y YANINDISGAKQVFDELHDKNDLLW L+LVGYVKCNLMDDA DLFMKIP RDV
Subjt:  LNETTFSTLLSICAHSGCTSEGKQFHCLVLKSGLQIFELVGSALLYMYANINDISGAKQVFDELHDKNDLLWSLMLVGYVKCNLMDDAFDLFMKIPKRDV

Query:  VAWTTLISGYARSEHNCKKALELFCSMWMNGEVEPNEFTFDCVLRACGRMRDLSQGKVVHGILTKYGFHFDHSICSALILFYCQCEAIDNAKAVYDS---
        VAWTT+IS YARSEHNCK+ LELFCSM MNGEVEPNEFTFD V+RACGRMR LS GKVVHGILTKYGFHFDHS+CSALILFYCQCEAIDNAKAVYDS   
Subjt:  VAWTTLISGYARSEHNCKKALELFCSMWMNGEVEPNEFTFDCVLRACGRMRDLSQGKVVHGILTKYGFHFDHSICSALILFYCQCEAIDNAKAVYDS---

Query:  PNKKAS
        P  KAS
Subjt:  PNKKAS

A0A1S4DSA9 pentatricopeptide repeat-containing protein At4g02750-like4.4e-15989.22Show/hide
Query:  MLRVSSSFGTWKHNRWKACLELFPTLCKGLHTENSNVISTNICISRHVRNGHLDLARTLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCNNIK
        MLR SSS GTWKHNRWKACLELF TLC+GLHTENSN+ISTN  ISRHVRNGHLDLARTLFNEMPVRSVVSWNIMISGYSK GKYSEALNLASGMHCNN+K
Subjt:  MLRVSSSFGTWKHNRWKACLELFPTLCKGLHTENSNVISTNICISRHVRNGHLDLARTLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCNNIK

Query:  LNETTFSTLLSICAHSGCTSEGKQFHCLVLKSGLQIFELVGSALLYMYANINDISGAKQVFDELHDKNDLLWSLMLVGYVKCNLMDDAFDLFMKIPKRDV
        LNETTFS+LLSICAHSGC+SEGKQFHCLVLKSGLQIFE VGSALLY+YANINDISGAKQVFDELHDKNDLLW LMLVGYVKCNLMDDAFDLF KIP  DV
Subjt:  LNETTFSTLLSICAHSGCTSEGKQFHCLVLKSGLQIFELVGSALLYMYANINDISGAKQVFDELHDKNDLLWSLMLVGYVKCNLMDDAFDLFMKIPKRDV

Query:  VAWTTLISGYARSEHNCKKALELFCSMWMNGEVEPNEFTFDCVLRACGRMRDLSQGKVVHGILTKYGFHFDHSICSALILFYCQCEAIDNAKAVYDS---
        V+WTT+ISGYARSEHNCK+ LELFCSM MNG VEPNEFTFD V+RACGRMRDLS GKVVHGILTKYGFHFDHS+CSALILFYCQCEAID+AKAVYDS   
Subjt:  VAWTTLISGYARSEHNCKKALELFCSMWMNGEVEPNEFTFDCVLRACGRMRDLSQGKVVHGILTKYGFHFDHSICSALILFYCQCEAIDNAKAVYDS---

Query:  PNKKAS
        P  KAS
Subjt:  PNKKAS

A0A6J1DY59 pentatricopeptide repeat-containing protein At2g13600-like1.2e-15387.88Show/hide
Query:  MLRVSSSFGTWKHNRWKACLELFPTLCKGLHTENSNVISTNICISRHVRNGHLDLARTLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCNNIK
        MLRVSSSFGTWKHNRWKA L LFPT+ K LHTENS++ISTNICISRHVRNG LDLA+TLFNEMPVRS+VSWN+MISGYSKLG+Y EALNLAS MHCNN+K
Subjt:  MLRVSSSFGTWKHNRWKACLELFPTLCKGLHTENSNVISTNICISRHVRNGHLDLARTLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCNNIK

Query:  LNETTFSTLLSICAHSGCTSEGKQFHCLVLKSGLQIFELVGSALLYMYANINDISGAKQVFDELHDKNDLLWSLMLVGYVKCNLMDDAFDLFMKIPKRDV
         NE TFSTLLS CAHS CT EGKQ HCLVLKSGLQIFELVGSALLY+YANI DI+GAKQVFDELH+KN LLWSLMLVGYVKCN MDDAFDLF KIPKRDV
Subjt:  LNETTFSTLLSICAHSGCTSEGKQFHCLVLKSGLQIFELVGSALLYMYANINDISGAKQVFDELHDKNDLLWSLMLVGYVKCNLMDDAFDLFMKIPKRDV

Query:  VAWTTLISGYARSEHNCKKALELFCSMWMNGEVEPNEFTFDCVLRACGRMRDLSQGKVVHGILTKYGFHFDHSICSALILFYCQCEAIDNAKAVYDS
        VAWTTLISGYARSE+NCK+ALELFC M MNGEVEPNEFTFDCV+RACGR+RDLSQGKVVHGILTKYG HFDHSIC ALILFYCQCEAIDNAKAVYDS
Subjt:  VAWTTLISGYARSEHNCKKALELFCSMWMNGEVEPNEFTFDCVLRACGRMRDLSQGKVVHGILTKYGFHFDHSICSALILFYCQCEAIDNAKAVYDS

A0A6J1H393 putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic2.9e-15587.21Show/hide
Query:  MLRVSSSFGTWKHNRWKACLELFPTLCKGLHTENSNVISTNICISRHVRNGHLDLARTLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCNNIK
        M+RVSS FGTWKHNRWKACL+LFP+ CK LHTENS ++STNICISRHVRNGHLDLA+TLF+EMPVRSVVSWNIMISGYSK+G+Y+EAL LASGMHC+N+K
Subjt:  MLRVSSSFGTWKHNRWKACLELFPTLCKGLHTENSNVISTNICISRHVRNGHLDLARTLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCNNIK

Query:  LNETTFSTLLSICAHSGCTSEGKQFHCLVLKSGLQIFELVGSALLYMYANINDISGAKQVFDELHDKNDLLWSLMLVGYVKCNLMDDAFDLFMKIPKRDV
        LNE TFSTLLSICAHSGCT EGKQ+HCLVLKSGLQIFELVGSALLY YAN +DI+GAK VFDELHDKNDLLWSLMLVGYVKCNLMDDAFDLF KIP RDV
Subjt:  LNETTFSTLLSICAHSGCTSEGKQFHCLVLKSGLQIFELVGSALLYMYANINDISGAKQVFDELHDKNDLLWSLMLVGYVKCNLMDDAFDLFMKIPKRDV

Query:  VAWTTLISGYARSEHNCKKALELFCSMWMNGEVEPNEFTFDCVLRACGRMRDLSQGKVVHGILTKYGFHFDHSICSALILFYCQCEAIDNAKAVYDS
        VAWTTLISGYARSEHNC++ALELFCSM  NGEVEPNEFTFDCV+RACGR+R LSQGKVVHGILTKYGFHFDHSIC ALILFYCQCEA+D AK VYDS
Subjt:  VAWTTLISGYARSEHNCKKALELFCSMWMNGEVEPNEFTFDCVLRACGRMRDLSQGKVVHGILTKYGFHFDHSICSALILFYCQCEAIDNAKAVYDS

A0A6J1K5J2 pentatricopeptide repeat-containing protein At2g13600-like4.2e-15486.82Show/hide
Query:  MLRVSSSFGTWKHNRWKACLELFPTLCKGLHTENSNVISTNICISRHVRNGHLDLARTLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCNNIK
        MLRV S FGTWKHNRWKACL+LFP+ CK LHTENS ++STNICISRHVRNGHLDLA+TLF+EMP+RSVVSWNIMISGYSK+G+YSEAL LASGMHC+N+K
Subjt:  MLRVSSSFGTWKHNRWKACLELFPTLCKGLHTENSNVISTNICISRHVRNGHLDLARTLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCNNIK

Query:  LNETTFSTLLSICAHSGCTSEGKQFHCLVLKSGLQIFELVGSALLYMYANINDISGAKQVFDELHDKNDLLWSLMLVGYVKCNLMDDAFDLFMKIPKRDV
        LNE TFSTLLSICAHSGCT EGKQ+HCLVLKSGLQIFELVGSALLY YAN NDI+GAK VFDELHDKNDLLWSLMLVGYVKCNLMDDAFDLF KIP RDV
Subjt:  LNETTFSTLLSICAHSGCTSEGKQFHCLVLKSGLQIFELVGSALLYMYANINDISGAKQVFDELHDKNDLLWSLMLVGYVKCNLMDDAFDLFMKIPKRDV

Query:  VAWTTLISGYARSEHNCKKALELFCSMWMNGEVEPNEFTFDCVLRACGRMRDLSQGKVVHGILTKYGFHFDHSICSALILFYCQCEAIDNAKAVYD
        V WTTLISGYARSEHNC++ALELFCSM  NGEVEPNEFTFDCV+RACGR+R L QGKVVHGILTKYGFHFDHSIC ALILFYCQCEA+D AK VYD
Subjt:  VAWTTLISGYARSEHNCKKALELFCSMWMNGEVEPNEFTFDCVLRACGRMRDLSQGKVVHGILTKYGFHFDHSICSALILFYCQCEAIDNAKAVYD

SwissProt top hitse value%identityAlignment
Q9CAA8 Putative pentatricopeptide repeat-containing protein At1g689307.5e-3934.08Show/hide
Query:  NVISTNICISRHVRNGHLDLARTLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCN-NIKLNETTFSTLLSICAHSGCTSEGKQFHCLVLKSGL
        N+ S N  +  + + G +    + F ++P R  V+WN++I GYS  G    A+   + M  + +  L   T  T+L + + +G  S GKQ H  V+K G 
Subjt:  NVISTNICISRHVRNGHLDLARTLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCN-NIKLNETTFSTLLSICAHSGCTSEGKQFHCLVLKSGL

Query:  QIFELVGSALLYMYANINDISGAKQVFDELHDKNDLLWSLMLVGYVKCNLMDDAFDLFMKIPKRDVVAWTTLISGYARSEHNCKKALELFCSMWMNGEVE
        + + LVGS LLYMYAN+  IS AK+VF  L D+N ++++ ++ G + C +++DA  LF  + K D V+W  +I G A++    K+A+E F  M + G ++
Subjt:  QIFELVGSALLYMYANINDISGAKQVFDELHDKNDLLWSLMLVGYVKCNLMDDAFDLFMKIPKRDVVAWTTLISGYARSEHNCKKALELFCSMWMNGEVE

Query:  PNEFTFDCVLRACGRMRDLSQGKVVHGILTKYGFHFDHSICSALILFYCQCEAIDNAKAVYDSPNKK
         +++ F  VL ACG +  +++GK +H  + +  F     + SALI  YC+C+ +  AK V+D   +K
Subjt:  PNEFTFDCVLRACGRMRDLSQGKVVHGILTKYGFHFDHSICSALILFYCQCEAIDNAKAVYDSPNKK

Q9M9R6 Pentatricopeptide repeat-containing protein At1g144702.0e-3632.68Show/hide
Query:  GTWKHNRWKACLELFPTLCKGLHTENSNVISTNICISRHVRNGHLDLARTLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCNNIKLNETTFST
        G WK    +   +LF  +        ++V+S  + I+   +   L+ AR  F+ MP +SVVSWN M+SGY++ G   +AL L + M    ++ NETT+  
Subjt:  GTWKHNRWKACLELFPTLCKGLHTENSNVISTNICISRHVRNGHLDLARTLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCNNIKLNETTFST

Query:  LLSICAHSGCTSEGKQFHCLVLKSGLQIFELVGSALLYMYANINDISGAKQVFDELHDKNDLL-WSLMLVGYVKCNLMDDAFDLFMKIPKRDVVAWTTLI
        ++S C+     S  +    L+ +  +++   V +ALL M+A   DI  A+++F+EL  + +L+ W+ M+ GY +   M  A  LF  +PKR+VV+W +LI
Subjt:  LLSICAHSGCTSEGKQFHCLVLKSGLQIFELVGSALLYMYANINDISGAKQVFDELHDKNDLL-WSLMLVGYVKCNLMDDAFDLFMKIPKRDVVAWTTLI

Query:  SGYARSEHNCKKAL--ELFCSMWMNGEVEPNEFTFDCVLRACGRMRDLSQGKVVHGILTKYGFHFDHSICSALILFYCQCEAIDNAKAVYDSPNKKASIL
        +GYA   HN + AL  E F  M   G+ +P+E T   VL ACG M DL  G  +   + K     + S   +LI  Y +   +  AK V+D   ++  + 
Subjt:  SGYARSEHNCKKAL--ELFCSMWMNGEVEPNEFTFDCVLRACGRMRDLSQGKVVHGILTKYGFHFDHSICSALILFYCQCEAIDNAKAVYDSPNKKASIL

Query:  EMTVAT
          T+ T
Subjt:  EMTVAT

Q9SHZ8 Pentatricopeptide repeat-containing protein At2g220705.0e-3530.04Show/hide
Query:  STNICISRHVRNGHLDLARTLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCNNIKLNETTFSTLLSICAHSGCTSEGKQFHCLVLKSGLQIFE
        S N  +S + + G +D     F+++P R  VSW  MI GY  +G+Y +A+ +   M    I+  + T + +L+  A + C   GK+ H  ++K GL+   
Subjt:  STNICISRHVRNGHLDLARTLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCNNIKLNETTFSTLLSICAHSGCTSEGKQFHCLVLKSGLQIFE

Query:  LVGSALLYMYANINDISGAKQVFDELHDKNDLLWSLMLVGYVKCNLMDDAFDLFMKIPKRDVVAWTTLISGYARSEHNCKKALELFCSMWMNGEVEPNEF
         V ++LL MYA   D   AK VFD +  ++   W+ M+  +++   MD A   F ++ +RD+V W ++ISG+ +  ++  +AL++F  M  +  + P+ F
Subjt:  LVGSALLYMYANINDISGAKQVFDELHDKNDLLWSLMLVGYVKCNLMDDAFDLFMKIPKRDVVAWTTLISGYARSEHNCKKALELFCSMWMNGEVEPNEF

Query:  TFDCVLRACGRMRDLSQGKVVHGILTKYGFHFDHSICSALILFYCQCEAIDNAKAVYDSPNKK
        T   VL AC  +  L  GK +H  +   GF     + +ALI  Y +C  ++ A+ + +    K
Subjt:  TFDCVLRACGRMRDLSQGKVVHGILTKYGFHFDHSICSALILFYCQCEAIDNAKAVYDSPNKK

Q9SJZ3 Pentatricopeptide repeat-containing protein At2g22410, mitochondrial2.9e-3529.19Show/hide
Query:  WKACLELFPTLCKGLHTENSNVISTNICISRHVRN---------GHLDLARTLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCNNIKLNETTF
        +K C +L   L    H    +V+   + +  HV N         G ++ AR +F+E PVR +VSWN +I+GY K+G+  +A+ +   M    +K ++ T 
Subjt:  WKACLELFPTLCKGLHTENSNVISTNICISRHVRN---------GHLDLARTLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCNNIKLNETTF

Query:  STLLSICAHSGCTSEGKQFHCLVLKSGLQIFELVGSALLYMYANINDISGAKQVFDELHDKNDLLWSLMLVGYVKCNLMDDAFDLFMKIPKRDVVAWTTL
          L+S C+  G  + GK+F+  V ++GL++   + +AL+ M++   DI  A+++FD L  +  + W+ M+ GY +C L+D +  LF  + ++DVV W  +
Subjt:  STLLSICAHSGCTSEGKQFHCLVLKSGLQIFELVGSALLYMYANINDISGAKQVFDELHDKNDLLWSLMLVGYVKCNLMDDAFDLFMKIPKRDVVAWTTL

Query:  ISGYARSEHNCKKALELFCSMWMNGEVEPNEFTFDCVLRACGRMRDLSQGKVVHGILTKYGFHFDHSICSALILFYCQCEAIDNAKAVYDSPNKKASI
        I G  +++   + AL LF  M      +P+E T    L AC ++  L  G  +H  + KY    + ++ ++L+  Y +C  I  A +V+     + S+
Subjt:  ISGYARSEHNCKKALELFCSMWMNGEVEPNEFTFDCVLRACGRMRDLSQGKVVHGILTKYGFHFDHSICSALILFYCQCEAIDNAKAVYDSPNKKASI

Q9SKQ4 Pentatricopeptide repeat-containing protein At2g210901.3e-3533.46Show/hide
Query:  NVISTNICISRHVRNGHLDLARTLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCNNIKLNETTFSTLLSICAHSGCTSEGKQFHCLVLKSGLQ
        N+ S N  +S +V++G L  AR +F+ MP R VVSWN M+ GY++ G   EAL        + IK NE +F+ LL+ C  S      +Q H  VL +G  
Subjt:  NVISTNICISRHVRNGHLDLARTLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCNNIKLNETTFSTLLSICAHSGCTSEGKQFHCLVLKSGLQ

Query:  IFELVGSALLYMYANINDISGAKQVFDELHDKNDLLWSLMLVGYVKCNLMDDAFDLFMKIPKRDVVAWTTLISGYARSEHNCKKALELFCSMWMNGEVEP
           ++  +++  YA    +  AK+ FDE+  K+  +W+ ++ GY K   M+ A  LF ++P+++ V+WT LI+GY R + +  +AL+LF  M   G V+P
Subjt:  IFELVGSALLYMYANINDISGAKQVFDELHDKNDLLWSLMLVGYVKCNLMDDAFDLFMKIPKRDVVAWTTLISGYARSEHNCKKALELFCSMWMNGEVEP

Query:  NEFTFDCVLRACGRMRDLSQGKVVHGILTKYGFHFDHSICSALILFYCQCEAIDNAKAVY
         +FTF   L A   +  L  GK +HG + +     +  + S+LI  Y +  +++ ++ V+
Subjt:  NEFTFDCVLRACGRMRDLSQGKVVHGILTKYGFHFDHSICSALILFYCQCEAIDNAKAVY

Arabidopsis top hitse value%identityAlignment
AT1G14470.1 Pentatricopeptide repeat (PPR) superfamily protein1.4e-3732.68Show/hide
Query:  GTWKHNRWKACLELFPTLCKGLHTENSNVISTNICISRHVRNGHLDLARTLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCNNIKLNETTFST
        G WK    +   +LF  +        ++V+S  + I+   +   L+ AR  F+ MP +SVVSWN M+SGY++ G   +AL L + M    ++ NETT+  
Subjt:  GTWKHNRWKACLELFPTLCKGLHTENSNVISTNICISRHVRNGHLDLARTLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCNNIKLNETTFST

Query:  LLSICAHSGCTSEGKQFHCLVLKSGLQIFELVGSALLYMYANINDISGAKQVFDELHDKNDLL-WSLMLVGYVKCNLMDDAFDLFMKIPKRDVVAWTTLI
        ++S C+     S  +    L+ +  +++   V +ALL M+A   DI  A+++F+EL  + +L+ W+ M+ GY +   M  A  LF  +PKR+VV+W +LI
Subjt:  LLSICAHSGCTSEGKQFHCLVLKSGLQIFELVGSALLYMYANINDISGAKQVFDELHDKNDLL-WSLMLVGYVKCNLMDDAFDLFMKIPKRDVVAWTTLI

Query:  SGYARSEHNCKKAL--ELFCSMWMNGEVEPNEFTFDCVLRACGRMRDLSQGKVVHGILTKYGFHFDHSICSALILFYCQCEAIDNAKAVYDSPNKKASIL
        +GYA   HN + AL  E F  M   G+ +P+E T   VL ACG M DL  G  +   + K     + S   +LI  Y +   +  AK V+D   ++  + 
Subjt:  SGYARSEHNCKKAL--ELFCSMWMNGEVEPNEFTFDCVLRACGRMRDLSQGKVVHGILTKYGFHFDHSICSALILFYCQCEAIDNAKAVYDSPNKKASIL

Query:  EMTVAT
          T+ T
Subjt:  EMTVAT

AT1G68930.1 pentatricopeptide (PPR) repeat-containing protein5.3e-4034.08Show/hide
Query:  NVISTNICISRHVRNGHLDLARTLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCN-NIKLNETTFSTLLSICAHSGCTSEGKQFHCLVLKSGL
        N+ S N  +  + + G +    + F ++P R  V+WN++I GYS  G    A+   + M  + +  L   T  T+L + + +G  S GKQ H  V+K G 
Subjt:  NVISTNICISRHVRNGHLDLARTLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCN-NIKLNETTFSTLLSICAHSGCTSEGKQFHCLVLKSGL

Query:  QIFELVGSALLYMYANINDISGAKQVFDELHDKNDLLWSLMLVGYVKCNLMDDAFDLFMKIPKRDVVAWTTLISGYARSEHNCKKALELFCSMWMNGEVE
        + + LVGS LLYMYAN+  IS AK+VF  L D+N ++++ ++ G + C +++DA  LF  + K D V+W  +I G A++    K+A+E F  M + G ++
Subjt:  QIFELVGSALLYMYANINDISGAKQVFDELHDKNDLLWSLMLVGYVKCNLMDDAFDLFMKIPKRDVVAWTTLISGYARSEHNCKKALELFCSMWMNGEVE

Query:  PNEFTFDCVLRACGRMRDLSQGKVVHGILTKYGFHFDHSICSALILFYCQCEAIDNAKAVYDSPNKK
         +++ F  VL ACG +  +++GK +H  + +  F     + SALI  YC+C+ +  AK V+D   +K
Subjt:  PNEFTFDCVLRACGRMRDLSQGKVVHGILTKYGFHFDHSICSALILFYCQCEAIDNAKAVYDSPNKK

AT2G21090.1 Pentatricopeptide repeat (PPR-like) superfamily protein9.4e-3733.46Show/hide
Query:  NVISTNICISRHVRNGHLDLARTLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCNNIKLNETTFSTLLSICAHSGCTSEGKQFHCLVLKSGLQ
        N+ S N  +S +V++G L  AR +F+ MP R VVSWN M+ GY++ G   EAL        + IK NE +F+ LL+ C  S      +Q H  VL +G  
Subjt:  NVISTNICISRHVRNGHLDLARTLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCNNIKLNETTFSTLLSICAHSGCTSEGKQFHCLVLKSGLQ

Query:  IFELVGSALLYMYANINDISGAKQVFDELHDKNDLLWSLMLVGYVKCNLMDDAFDLFMKIPKRDVVAWTTLISGYARSEHNCKKALELFCSMWMNGEVEP
           ++  +++  YA    +  AK+ FDE+  K+  +W+ ++ GY K   M+ A  LF ++P+++ V+WT LI+GY R + +  +AL+LF  M   G V+P
Subjt:  IFELVGSALLYMYANINDISGAKQVFDELHDKNDLLWSLMLVGYVKCNLMDDAFDLFMKIPKRDVVAWTTLISGYARSEHNCKKALELFCSMWMNGEVEP

Query:  NEFTFDCVLRACGRMRDLSQGKVVHGILTKYGFHFDHSICSALILFYCQCEAIDNAKAVY
         +FTF   L A   +  L  GK +HG + +     +  + S+LI  Y +  +++ ++ V+
Subjt:  NEFTFDCVLRACGRMRDLSQGKVVHGILTKYGFHFDHSICSALILFYCQCEAIDNAKAVY

AT2G22070.1 pentatricopeptide (PPR) repeat-containing protein3.6e-3630.04Show/hide
Query:  STNICISRHVRNGHLDLARTLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCNNIKLNETTFSTLLSICAHSGCTSEGKQFHCLVLKSGLQIFE
        S N  +S + + G +D     F+++P R  VSW  MI GY  +G+Y +A+ +   M    I+  + T + +L+  A + C   GK+ H  ++K GL+   
Subjt:  STNICISRHVRNGHLDLARTLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCNNIKLNETTFSTLLSICAHSGCTSEGKQFHCLVLKSGLQIFE

Query:  LVGSALLYMYANINDISGAKQVFDELHDKNDLLWSLMLVGYVKCNLMDDAFDLFMKIPKRDVVAWTTLISGYARSEHNCKKALELFCSMWMNGEVEPNEF
         V ++LL MYA   D   AK VFD +  ++   W+ M+  +++   MD A   F ++ +RD+V W ++ISG+ +  ++  +AL++F  M  +  + P+ F
Subjt:  LVGSALLYMYANINDISGAKQVFDELHDKNDLLWSLMLVGYVKCNLMDDAFDLFMKIPKRDVVAWTTLISGYARSEHNCKKALELFCSMWMNGEVEPNEF

Query:  TFDCVLRACGRMRDLSQGKVVHGILTKYGFHFDHSICSALILFYCQCEAIDNAKAVYDSPNKK
        T   VL AC  +  L  GK +H  +   GF     + +ALI  Y +C  ++ A+ + +    K
Subjt:  TFDCVLRACGRMRDLSQGKVVHGILTKYGFHFDHSICSALILFYCQCEAIDNAKAVYDSPNKK

AT2G22410.1 SLOW GROWTH 12.1e-3629.19Show/hide
Query:  WKACLELFPTLCKGLHTENSNVISTNICISRHVRN---------GHLDLARTLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCNNIKLNETTF
        +K C +L   L    H    +V+   + +  HV N         G ++ AR +F+E PVR +VSWN +I+GY K+G+  +A+ +   M    +K ++ T 
Subjt:  WKACLELFPTLCKGLHTENSNVISTNICISRHVRN---------GHLDLARTLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCNNIKLNETTF

Query:  STLLSICAHSGCTSEGKQFHCLVLKSGLQIFELVGSALLYMYANINDISGAKQVFDELHDKNDLLWSLMLVGYVKCNLMDDAFDLFMKIPKRDVVAWTTL
          L+S C+  G  + GK+F+  V ++GL++   + +AL+ M++   DI  A+++FD L  +  + W+ M+ GY +C L+D +  LF  + ++DVV W  +
Subjt:  STLLSICAHSGCTSEGKQFHCLVLKSGLQIFELVGSALLYMYANINDISGAKQVFDELHDKNDLLWSLMLVGYVKCNLMDDAFDLFMKIPKRDVVAWTTL

Query:  ISGYARSEHNCKKALELFCSMWMNGEVEPNEFTFDCVLRACGRMRDLSQGKVVHGILTKYGFHFDHSICSALILFYCQCEAIDNAKAVYDSPNKKASI
        I G  +++   + AL LF  M      +P+E T    L AC ++  L  G  +H  + KY    + ++ ++L+  Y +C  I  A +V+     + S+
Subjt:  ISGYARSEHNCKKALELFCSMWMNGEVEPNEFTFDCVLRACGRMRDLSQGKVVHGILTKYGFHFDHSICSALILFYCQCEAIDNAKAVYDSPNKKASI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGAGGGTGTCATCATCTTTTGGAACATGGAAGCACAATCGTTGGAAAGCTTGCCTGGAACTATTCCCGACTCTATGTAAAGGTTTACATACTGAAAACTCCAATGT
TATTTCTACCAATATTTGTATAAGTCGTCATGTAAGAAATGGTCATCTTGATCTTGCTCGAACTCTGTTCAATGAAATGCCAGTAAGAAGTGTTGTCTCGTGGAATATCA
TGATTTCTGGATACTCCAAATTAGGAAAGTATAGTGAAGCTCTCAATCTGGCTTCAGGGATGCATTGCAATAATATAAAATTAAATGAGACGACCTTTTCTACTTTGTTG
AGTATTTGTGCACATTCAGGGTGTACATCTGAGGGAAAACAATTTCATTGTTTGGTTTTGAAATCTGGGTTGCAGATATTTGAGCTTGTGGGCAGTGCATTGTTGTATAT
GTATGCAAACATCAATGACATTAGTGGAGCTAAGCAAGTCTTTGATGAGTTGCATGATAAGAATGATTTATTATGGAGCTTGATGCTTGTGGGGTATGTGAAATGCAATT
TGATGGATGATGCTTTTGATCTATTTATGAAAATTCCAAAACGGGATGTGGTGGCGTGGACTACTTTGATATCAGGGTATGCAAGAAGTGAGCATAACTGCAAGAAGGCA
TTGGAATTATTCTGCTCGATGTGGATGAATGGTGAGGTTGAGCCTAATGAGTTCACTTTTGATTGTGTTTTGAGAGCTTGTGGGAGAATGAGAGATTTGAGTCAGGGGAA
GGTTGTTCATGGGATTTTGACTAAATATGGATTCCACTTCGATCATTCAATTTGTAGTGCGCTGATTTTATTTTACTGTCAGTGTGAAGCTATTGACAATGCGAAGGCAG
TTTATGATAGTCCCAACAAGAAAGCTTCCATACTGGAAATGACAGTTGCAACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGAGGGTGTCATCATCTTTTGGAACATGGAAGCACAATCGTTGGAAAGCTTGCCTGGAACTATTCCCGACTCTATGTAAAGGTTTACATACTGAAAACTCCAATGT
TATTTCTACCAATATTTGTATAAGTCGTCATGTAAGAAATGGTCATCTTGATCTTGCTCGAACTCTGTTCAATGAAATGCCAGTAAGAAGTGTTGTCTCGTGGAATATCA
TGATTTCTGGATACTCCAAATTAGGAAAGTATAGTGAAGCTCTCAATCTGGCTTCAGGGATGCATTGCAATAATATAAAATTAAATGAGACGACCTTTTCTACTTTGTTG
AGTATTTGTGCACATTCAGGGTGTACATCTGAGGGAAAACAATTTCATTGTTTGGTTTTGAAATCTGGGTTGCAGATATTTGAGCTTGTGGGCAGTGCATTGTTGTATAT
GTATGCAAACATCAATGACATTAGTGGAGCTAAGCAAGTCTTTGATGAGTTGCATGATAAGAATGATTTATTATGGAGCTTGATGCTTGTGGGGTATGTGAAATGCAATT
TGATGGATGATGCTTTTGATCTATTTATGAAAATTCCAAAACGGGATGTGGTGGCGTGGACTACTTTGATATCAGGGTATGCAAGAAGTGAGCATAACTGCAAGAAGGCA
TTGGAATTATTCTGCTCGATGTGGATGAATGGTGAGGTTGAGCCTAATGAGTTCACTTTTGATTGTGTTTTGAGAGCTTGTGGGAGAATGAGAGATTTGAGTCAGGGGAA
GGTTGTTCATGGGATTTTGACTAAATATGGATTCCACTTCGATCATTCAATTTGTAGTGCGCTGATTTTATTTTACTGTCAGTGTGAAGCTATTGACAATGCGAAGGCAG
TTTATGATAGTCCCAACAAGAAAGCTTCCATACTGGAAATGACAGTTGCAACTTGA
Protein sequenceShow/hide protein sequence
MLRVSSSFGTWKHNRWKACLELFPTLCKGLHTENSNVISTNICISRHVRNGHLDLARTLFNEMPVRSVVSWNIMISGYSKLGKYSEALNLASGMHCNNIKLNETTFSTLL
SICAHSGCTSEGKQFHCLVLKSGLQIFELVGSALLYMYANINDISGAKQVFDELHDKNDLLWSLMLVGYVKCNLMDDAFDLFMKIPKRDVVAWTTLISGYARSEHNCKKA
LELFCSMWMNGEVEPNEFTFDCVLRACGRMRDLSQGKVVHGILTKYGFHFDHSICSALILFYCQCEAIDNAKAVYDSPNKKASILEMTVAT