CuGenDBv2

Gene ID	HG10008922
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	UBA domain-containing protein
Genome location	Chr06:753930..756217
RNA-Seq Expression	HG10008922
Synteny	HG10008922
Gene Ontology terms	GO:0043162 - ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway (biological process) GO:0000813 - ESCRT I complex (cellular component) GO:0043130 - ubiquitin binding (molecular function)
InterPro domains	IPR009060 - UBA-like superfamily IPR038870 - Ubiquitin-associated protein 1 IPR042575 - Ubiquitin-associated protein 1, C-terminal

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004145917.1 uncharacterized protein LOC101219735 [Cucumis sativus]

1.6e-112

93.3

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Query:  MAYDYRNKPGHYDAHPPMYGSTASSSPSPSPHPMYSQSMYPRIGQQAPSPTPPVARLSSHHHSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGD
        MAYD+RN  GHYD+H PMY STASSSPSPSPHPMYS SMYPRIGQQAPS TPPVARLSSHH+SSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGD
Subjt:  MAYDYRNKPGHYDAHPPMYGSTASSSPSPSPHPMYSQSMYPRIGQQAPSPTPPVARLSSHHHSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGD

Query:  IPRSNFQFDFEFEKKVLAEAEKETPNWNRFGLEHLPSKPVESTSSMGSMGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSSMK
        IPRSNFQFDFEFEKKVLAEAEKE PNWNRFGLEH P KPVESTSSMGS+GDPVVSKYVASGL+REAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS+K
Subjt:  IPRSNFQFDFEFEKKVLAEAEKETPNWNRFGLEHLPSKPVESTSSMGSMGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSSMK

Query:  VVEALLMYDNDTDKAVAHFLGGTS
        VVEALLMYDNDTDKAVAHFLGGTS
Subjt:  VVEALLMYDNDTDKAVAHFLGGTS

XP_008437562.1 PREDICTED: uncharacterized protein LOC103482940 isoform X1 [Cucumis melo]

1.9e-110

92.41

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Query:  MAYDYRNKPGHYDAHPPMYGSTASSSPSPSPHPMYSQSMYPRIGQQAPSPTPPVARLSSHHHSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGD
        MAYD+RN  GHYD+H PMY STASS+PSPSPHPMYSQSMYPRIGQQAPS TPPVARLSSHHHSSSPS SPSSSSGLGIRVTIKPEYRITPPPQLSPQVGD
Subjt:  MAYDYRNKPGHYDAHPPMYGSTASSSPSPSPHPMYSQSMYPRIGQQAPSPTPPVARLSSHHHSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGD

Query:  IPRSNFQFDFEFEKKVLAEAEKETPNWNRFGLEHLPSKPVESTSSMGSMGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSSMK
        IPRSNF FDFEFEKKVLAEAEKE PNWNRFGLE LP KPVESTSSMGS+GDP VSKYVASGL+REAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS+K
Subjt:  IPRSNFQFDFEFEKKVLAEAEKETPNWNRFGLEHLPSKPVESTSSMGSMGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSSMK

Query:  VVEALLMYDNDTDKAVAHFLGGTS
        VVEALLMYDNDTDKAVAHFLGGTS
Subjt:  VVEALLMYDNDTDKAVAHFLGGTS

XP_008437563.1 PREDICTED: uncharacterized protein LOC103482940 isoform X2 [Cucumis melo]

1.1e-108

92.31

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Query:  MAYDYRNKPGHYDAHPPMYGSTASSSPSPSPHPMYSQSMYPRIGQQAPSPTPPVARLSSHHHSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGD
        MAYD+RN  GHYD+H PMY STASS+PSPSPHPMYSQSMYPRIGQQAPS TPPVARLSSHHHSSSPS SPSSSSGLGIRVTIKPEYRITPPPQLSPQVGD
Subjt:  MAYDYRNKPGHYDAHPPMYGSTASSSPSPSPHPMYSQSMYPRIGQQAPSPTPPVARLSSHHHSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGD

Query:  IPRSNFQFDFEFEKKVLAEAEKETPNWNRFGLEHLPSKPVESTSSMGSMGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSSMK
        IPRSNF FDFEFEKKVLAEAEKE PNWNRFGLE LP KPVESTSSMGS+GDP VSKYVASGL+REAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS+K
Subjt:  IPRSNFQFDFEFEKKVLAEAEKETPNWNRFGLEHLPSKPVESTSSMGSMGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSSMK

Query:  VVEALLMYDNDTDKAVAHFLG
        VVEALLMYDNDTDKAVAHFLG
Subjt:  VVEALLMYDNDTDKAVAHFLG

XP_022958203.1 uncharacterized protein LOC111459499 [Cucurbita moschata]

1.8e-108

90.71

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Query:  MAYDYRNKPGHYDAHPPMYGSTASSSPSPSPHPMYSQSMYPRIGQQAPSPTPPVARLSSHHHSSSPSPSPS--SSSGLGIRVTIKPEYRITPPPQLSPQV
        MAYDYRNKPG+Y+AHPPMYG  ASSSPSPS HPMY+QSMYPRIGQQ  SP PPVAR+SSHHHSSS +PSPS  SSSGLGIRVTIKPEYRITPPPQLSPQV
Subjt:  MAYDYRNKPGHYDAHPPMYGSTASSSPSPSPHPMYSQSMYPRIGQQAPSPTPPVARLSSHHHSSSPSPSPS--SSSGLGIRVTIKPEYRITPPPQLSPQV

Query:  GDIPRSNFQFDFEFEKKVLAEAEKETPNWNRFGLEHLPSKPVESTSSMGSMGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS
        GDIPRSNFQFDFEFEKKVLAEAEKETPNWNRFGLEH PS+PVES+SSMGS GDPVVSKYVASGLSREAVS AVANYGDNPTKVQEFVKGYTLLREMGF S
Subjt:  GDIPRSNFQFDFEFEKKVLAEAEKETPNWNRFGLEHLPSKPVESTSSMGSMGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS

Query:  MKVVEALLMYDNDTDKAVAHFLGGTS
         KVVEALLMYDNDTDKAVAHFLGGTS
Subjt:  MKVVEALLMYDNDTDKAVAHFLGGTS

XP_038874870.1 uncharacterized protein LOC120067367 [Benincasa hispida]

4.4e-115

95.59

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Query:  MAYDYRNKPGHYDAHPPMYGSTASSSPSPSPHPMYSQSMYPRIGQQAPSPTPPVARLSSHHHSS--SPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQV
        MAYDYRNKPGHYDAHPPMYG TASSSPSPSPHPMYSQSMYPRIGQQAPS T PVARLSSHHHSS  SPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQ+
Subjt:  MAYDYRNKPGHYDAHPPMYGSTASSSPSPSPHPMYSQSMYPRIGQQAPSPTPPVARLSSHHHSS--SPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQV

Query:  GDIPRSNFQFDFEFEKKVLAEAEKETPNWNRFGLEHLPSKPVES-TSSMGSMGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFS
        GDIPRSNFQFDFEFEKKVLAEAEKETPNWNRFGLEHLPSKPVES TSSM S+GDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFS
Subjt:  GDIPRSNFQFDFEFEKKVLAEAEKETPNWNRFGLEHLPSKPVES-TSSMGSMGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFS

Query:  SMKVVEALLMYDNDTDKAVAHFLGGTS
        S+KVVEALLMYDNDTDKAVAHFLGGTS
Subjt:  SMKVVEALLMYDNDTDKAVAHFLGGTS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KNB8 Uncharacterized protein

7.6e-113

93.3

Show/hide

Query:  MAYDYRNKPGHYDAHPPMYGSTASSSPSPSPHPMYSQSMYPRIGQQAPSPTPPVARLSSHHHSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGD
        MAYD+RN  GHYD+H PMY STASSSPSPSPHPMYS SMYPRIGQQAPS TPPVARLSSHH+SSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGD
Subjt:  MAYDYRNKPGHYDAHPPMYGSTASSSPSPSPHPMYSQSMYPRIGQQAPSPTPPVARLSSHHHSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGD

Query:  IPRSNFQFDFEFEKKVLAEAEKETPNWNRFGLEHLPSKPVESTSSMGSMGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSSMK
        IPRSNFQFDFEFEKKVLAEAEKE PNWNRFGLEH P KPVESTSSMGS+GDPVVSKYVASGL+REAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS+K
Subjt:  IPRSNFQFDFEFEKKVLAEAEKETPNWNRFGLEHLPSKPVESTSSMGSMGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSSMK

Query:  VVEALLMYDNDTDKAVAHFLGGTS
        VVEALLMYDNDTDKAVAHFLGGTS
Subjt:  VVEALLMYDNDTDKAVAHFLGGTS

A0A1S3AUC1 uncharacterized protein LOC103482940 isoform X2

5.1e-109

92.31

Show/hide

Query:  MAYDYRNKPGHYDAHPPMYGSTASSSPSPSPHPMYSQSMYPRIGQQAPSPTPPVARLSSHHHSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGD
        MAYD+RN  GHYD+H PMY STASS+PSPSPHPMYSQSMYPRIGQQAPS TPPVARLSSHHHSSSPS SPSSSSGLGIRVTIKPEYRITPPPQLSPQVGD
Subjt:  MAYDYRNKPGHYDAHPPMYGSTASSSPSPSPHPMYSQSMYPRIGQQAPSPTPPVARLSSHHHSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGD

Query:  IPRSNFQFDFEFEKKVLAEAEKETPNWNRFGLEHLPSKPVESTSSMGSMGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSSMK
        IPRSNF FDFEFEKKVLAEAEKE PNWNRFGLE LP KPVESTSSMGS+GDP VSKYVASGL+REAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS+K
Subjt:  IPRSNFQFDFEFEKKVLAEAEKETPNWNRFGLEHLPSKPVESTSSMGSMGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSSMK

Query:  VVEALLMYDNDTDKAVAHFLG
        VVEALLMYDNDTDKAVAHFLG
Subjt:  VVEALLMYDNDTDKAVAHFLG

A0A1S3AUG0 uncharacterized protein LOC103482940 isoform X1

9.3e-111

92.41

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Query:  MAYDYRNKPGHYDAHPPMYGSTASSSPSPSPHPMYSQSMYPRIGQQAPSPTPPVARLSSHHHSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGD
        MAYD+RN  GHYD+H PMY STASS+PSPSPHPMYSQSMYPRIGQQAPS TPPVARLSSHHHSSSPS SPSSSSGLGIRVTIKPEYRITPPPQLSPQVGD
Subjt:  MAYDYRNKPGHYDAHPPMYGSTASSSPSPSPHPMYSQSMYPRIGQQAPSPTPPVARLSSHHHSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGD

Query:  IPRSNFQFDFEFEKKVLAEAEKETPNWNRFGLEHLPSKPVESTSSMGSMGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSSMK
        IPRSNF FDFEFEKKVLAEAEKE PNWNRFGLE LP KPVESTSSMGS+GDP VSKYVASGL+REAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS+K
Subjt:  IPRSNFQFDFEFEKKVLAEAEKETPNWNRFGLEHLPSKPVESTSSMGSMGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSSMK

Query:  VVEALLMYDNDTDKAVAHFLGGTS
        VVEALLMYDNDTDKAVAHFLGGTS
Subjt:  VVEALLMYDNDTDKAVAHFLGGTS

A0A1S3AUY5 uncharacterized protein LOC103482940 isoform X3

4.3e-108

91.52

Show/hide

Query:  MAYDYRNKPGHYDAHPPMYGSTASSSPSPSPHPMYSQSMYPRIGQQAPSPTPPVARLSSHHHSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGD
        MAYD+RN  GHYD+H PMY STASS+PSPSPHPMYSQSMYPRIGQQAPS TPPVARLSSHHHSSSPS SPSSS  LGIRVTIKPEYRITPPPQLSPQVGD
Subjt:  MAYDYRNKPGHYDAHPPMYGSTASSSPSPSPHPMYSQSMYPRIGQQAPSPTPPVARLSSHHHSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGD

Query:  IPRSNFQFDFEFEKKVLAEAEKETPNWNRFGLEHLPSKPVESTSSMGSMGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSSMK
        IPRSNF FDFEFEKKVLAEAEKE PNWNRFGLE LP KPVESTSSMGS+GDP VSKYVASGL+REAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS+K
Subjt:  IPRSNFQFDFEFEKKVLAEAEKETPNWNRFGLEHLPSKPVESTSSMGSMGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSSMK

Query:  VVEALLMYDNDTDKAVAHFLGGTS
        VVEALLMYDNDTDKAVAHFLGGTS
Subjt:  VVEALLMYDNDTDKAVAHFLGGTS

A0A6J1H2H7 uncharacterized protein LOC111459499

8.7e-109

90.71

Show/hide

Query:  MAYDYRNKPGHYDAHPPMYGSTASSSPSPSPHPMYSQSMYPRIGQQAPSPTPPVARLSSHHHSSSPSPSPS--SSSGLGIRVTIKPEYRITPPPQLSPQV
        MAYDYRNKPG+Y+AHPPMYG  ASSSPSPS HPMY+QSMYPRIGQQ  SP PPVAR+SSHHHSSS +PSPS  SSSGLGIRVTIKPEYRITPPPQLSPQV
Subjt:  MAYDYRNKPGHYDAHPPMYGSTASSSPSPSPHPMYSQSMYPRIGQQAPSPTPPVARLSSHHHSSSPSPSPS--SSSGLGIRVTIKPEYRITPPPQLSPQV

Query:  GDIPRSNFQFDFEFEKKVLAEAEKETPNWNRFGLEHLPSKPVESTSSMGSMGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS
        GDIPRSNFQFDFEFEKKVLAEAEKETPNWNRFGLEH PS+PVES+SSMGS GDPVVSKYVASGLSREAVS AVANYGDNPTKVQEFVKGYTLLREMGF S
Subjt:  GDIPRSNFQFDFEFEKKVLAEAEKETPNWNRFGLEHLPSKPVESTSSMGSMGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSS

Query:  MKVVEALLMYDNDTDKAVAHFLGGTS
         KVVEALLMYDNDTDKAVAHFLGGTS
Subjt:  MKVVEALLMYDNDTDKAVAHFLGGTS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G53330.1 Ubiquitin-associated/translation elongation factor EF1B protein

1.2e-62

60.61

Show/hide

Query:  MAYDYRNKPGHYDAHPPMYGSTASSSPSPSP-HPMYSQSMYPRIGQQ-APSPT--PPVARLSSHHHSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSP
        M YDYRNK G      PMYG   S+SPSPS  HPMY    YP+IGQQ  P P    P  R SS  H++SP      SSG+GIRV +KPEYRITPPPQL P
Subjt:  MAYDYRNKPGHYDAHPPMYGSTASSSPSPSP-HPMYSQSMYPRIGQQ-APSPT--PPVARLSSHHHSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSP

Query:  QVGDIPRSNFQFDFEFEKKVLAEAEKETPNWNRFGLEHLPSKPVE-STSSMGSMG--DPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLRE
        +VGDI RS+FQFDF  E+KVLAEAEK+ P+W++FG E+ P+K  E S SS+G M   D VV KY ASGL+REAV+ AVANYGDNPTKVQEF  G+T +RE
Subjt:  QVGDIPRSNFQFDFEFEKKVLAEAEKETPNWNRFGLEHLPSKPVE-STSSMGSMG--DPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLRE

Query:  MGFSSMKVVEALLMYDNDTDKAVAHFLGGTS
        MGF +  V +AL M++NDTDKA+AH L G+S
Subjt:  MGFSSMKVVEALLMYDNDTDKAVAHFLGGTS

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCGTACGATTACAGAAACAAGCCCGGCCACTACGATGCTCATCCGCCGATGTACGGCTCAACCGCTTCTTCTTCCCCATCTCCCTCTCCCCATCCCATGTATTCACA
GTCAATGTACCCCAGGATCGGTCAACAAGCTCCTTCACCGACCCCTCCGGTGGCCCGTCTCTCTTCCCACCATCATTCTTCTTCTCCATCTCCATCACCTTCTTCCTCTT
CAGGATTGGGCATCAGGGTTACCATTAAACCGGAATATCGAATTACTCCTCCGCCTCAATTATCTCCACAAGTTGGAGACATTCCTCGGAGCAATTTCCAATTTGATTTT
GAGTTTGAGAAAAAGGTTTTAGCTGAAGCAGAGAAAGAAACTCCGAATTGGAATCGGTTTGGGCTGGAACATCTTCCTTCTAAACCAGTGGAGTCCACATCTTCAATGGG
TTCAATGGGAGATCCAGTTGTGAGCAAGTATGTTGCATCTGGCTTGAGTCGGGAAGCTGTTTCATTTGCAGTTGCTAATTATGGAGACAATCCAACCAAGGTTCAAGAAT
TTGTAAAAGGCTACACACTCCTACGAGAAATGGGATTCTCTTCCATGAAGGTGGTCGAGGCATTGCTCATGTATGACAATGACACCGATAAGGCTGTAGCTCATTTTCTT
GGCGGTACGTCTTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MAYDYRNKPGHYDAHPPMYGSTASSSPSPSPHPMYSQSMYPRIGQQAPSPTPPVARLSSHHHSSSPSPSPSSSSGLGIRVTIKPEYRITPPPQLSPQVGDIPRSNFQFDF
EFEKKVLAEAEKETPNWNRFGLEHLPSKPVESTSSMGSMGDPVVSKYVASGLSREAVSFAVANYGDNPTKVQEFVKGYTLLREMGFSSMKVVEALLMYDNDTDKAVAHFL
GGTS

HG10008922 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome