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HG10008932 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008932
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionDimer_Tnp_hAT domain-containing protein
Genome locationChr06:832860..833132
RNA-Seq ExpressionHG10008932
SyntenyHG10008932
Gene Ontology termsGO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR008906 - HAT, C-terminal dimerisation domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
POO01083.1 HAT, C-terminal dimerization domain containing protein [Trema orientale]2.2e-0450.94Show/hide
Query:  MAKDVFAISLSTTSLEPPFSTKGLVLDKYHSTLTRRSEKMVEVVICLRNWLGS
        MAKDV A+ +ST + E  FST G +LD + S+L   S KMVE +IC +NWL +
Subjt:  MAKDVFAISLSTTSLEPPFSTKGLVLDKYHSTLTRRSEKMVEVVICLRNWLGS

TXG69465.1 hypothetical protein EZV62_004400 [Acer yangbiense]1.3e-0454.9Show/hide
Query:  MAKDVFAISLSTTSLEPPFSTKGLVLDKYHSTLTRRSEKMVEVVICLRNWL
        +AKD+F I +ST + E  FST G VLD + S+L   S KMVE++ICL+NWL
Subjt:  MAKDVFAISLSTTSLEPPFSTKGLVLDKYHSTLTRRSEKMVEVVICLRNWL

XP_022863034.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Olea europaea var. sylvestris]4.8e-0445.33Show/hide
Query:  MAKDVFAISLSTTSLEPPFSTKGLVLDKYHSTLTRRSEKMVEVVICLRNWLGSQDE-----TDEHELEEMEDEEE
        +AKDV AI +ST +LE  FST G +LD + S+L   + KMVE +IC +NWL S +E      D  E E + D E+
Subjt:  MAKDVFAISLSTTSLEPPFSTKGLVLDKYHSTLTRRSEKMVEVVICLRNWLGSQDE-----TDEHELEEMEDEEE

XP_022889222.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Olea europaea var. sylvestris]4.8e-0450Show/hide
Query:  MAKDVFAISLSTTSLEPPFSTKGLVLDKYHSTLTRRSEKMVEVVICLRNWLGSQDE
        +AKDV AI +ST + E  FST G +L+ + S+L   S KMVE +IC +NWL S +E
Subjt:  MAKDVFAISLSTTSLEPPFSTKGLVLDKYHSTLTRRSEKMVEVVICLRNWLGSQDE

XP_024923790.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Ziziphus jujuba]2.2e-0444.62Show/hide
Query:  MAKDVFAISLSTTSLEPPFSTKGLVLDKYHSTLTRRSEKMVEVVICLRNWLGSQDETDEHELEEM
        +AKD+FAI +ST + E  FST G +LD + S+LT    KMVEV++C +NWL +    D   +E++
Subjt:  MAKDVFAISLSTTSLEPPFSTKGLVLDKYHSTLTRRSEKMVEVVICLRNWLGSQDETDEHELEEM

TrEMBL top hitse value%identityAlignment
A0A2P6S7F7 Putative HAT dimerization domain, ribonuclease H-like domain, hAT-like transposase, RNase-H8.9e-0446.15Show/hide
Query:  MAKDVFAISLSTTSLEPPFSTKGLVLDKYHSTLTRRSEKMVEVVICLRNWLGSQDETDEH--ELEEMEDEEEMEEDKL
        +A+DV AI +ST +LE  FST G ++D Y S+L   S +MVE +IC +NWL S++    H   +EEME  EE E + L
Subjt:  MAKDVFAISLSTTSLEPPFSTKGLVLDKYHSTLTRRSEKMVEVVICLRNWLGSQDETDEH--ELEEMEDEEEMEEDKL

A0A498JYQ1 Dimer_Tnp_hAT domain-containing protein2.3e-0449.3Show/hide
Query:  MAKDVFAISLSTTSLEPPFSTKGLVLDKYHSTLTRRSEKMVEVVICLRNWLGSQDETDEHELEEMEDEEEM
        +A+DVFAI +ST + E  FST G +LD Y STLT    KMVE +IC +NWL S     E E   +E+ E M
Subjt:  MAKDVFAISLSTTSLEPPFSTKGLVLDKYHSTLTRRSEKMVEVVICLRNWLGSQDETDEHELEEMEDEEEM

A0A5C7IJZ6 Dimer_Tnp_hAT domain-containing protein6.2e-0554.9Show/hide
Query:  MAKDVFAISLSTTSLEPPFSTKGLVLDKYHSTLTRRSEKMVEVVICLRNWL
        +AKD+F I +ST + E  FST G VLD + S+L   S KMVE++ICL+NWL
Subjt:  MAKDVFAISLSTTSLEPPFSTKGLVLDKYHSTLTRRSEKMVEVVICLRNWL

A0A6P6FQL9 zinc finger BED domain-containing protein RICESLEEPER 2-like1.1e-0444.62Show/hide
Query:  MAKDVFAISLSTTSLEPPFSTKGLVLDKYHSTLTRRSEKMVEVVICLRNWLGSQDETDEHELEEM
        +AKD+FAI +ST + E  FST G +LD + S+LT    KMVEV++C +NWL +    D   +E++
Subjt:  MAKDVFAISLSTTSLEPPFSTKGLVLDKYHSTLTRRSEKMVEVVICLRNWLGSQDETDEHELEEM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGGACGTGTTTGCAATTTCCCTCTCAACTACTTCCCTAGAGCCACCTTTCAGCACTAAAGGTCTGGTACTCGATAAATATCACAGCACATTAACTCGGCGATC
TGAAAAAATGGTCGAGGTTGTCATTTGTTTGCGAAATTGGCTTGGCTCACAAGACGAAACAGATGAGCATGAGCTTGAAGAGATGGAAGATGAAGAAGAGATGGAAGAGG
ACAAGTTGGGAGGTGAAGAGTTGGAGGATGAAAAATGGGAGAATGAAGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAGGACGTGTTTGCAATTTCCCTCTCAACTACTTCCCTAGAGCCACCTTTCAGCACTAAAGGTCTGGTACTCGATAAATATCACAGCACATTAACTCGGCGATC
TGAAAAAATGGTCGAGGTTGTCATTTGTTTGCGAAATTGGCTTGGCTCACAAGACGAAACAGATGAGCATGAGCTTGAAGAGATGGAAGATGAAGAAGAGATGGAAGAGG
ACAAGTTGGGAGGTGAAGAGTTGGAGGATGAAAAATGGGAGAATGAAGAGTAG
Protein sequenceShow/hide protein sequence
MAKDVFAISLSTTSLEPPFSTKGLVLDKYHSTLTRRSEKMVEVVICLRNWLGSQDETDEHELEEMEDEEEMEEDKLGGEELEDEKWENEE