; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10008961 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008961
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description28S ribosomal protein S9, mitochondrial
Genome locationChr06:1115212..1115811
RNA-Seq ExpressionHG10008961
SyntenyHG10008961
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005763 - mitochondrial small ribosomal subunit (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579377.1 30S ribosomal protein S9, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]6.3e-8182.99Show/hide
Query:  MLSRLLAKPSHFRLLALISTKPPAQTPSFHLIPRFFSTNNNGSNNNRNSGSRDQPTSNVWKISQQNDENFDELFTQEADNLDGIAEDDSAAGNDDSWVRS
        MLSRLL KPSHFRLL LISTKPPAQ+P FHL+PRFFS++NNGSNNN+N GSRDQPTSNVWK+S+++DENFD+LFTQEADNLDGIAEDDSA  NDDSWVRS
Subjt:  MLSRLLAKPSHFRLLALISTKPPAQTPSFHLIPRFFSTNNNGSNNNRNSGSRDQPTSNVWKISQQNDENFDELFTQEADNLDGIAEDDSAAGNDDSWVRS

Query:  KGEDQGAEGDIFASVEEEVRGNKDGNGDNEWVTAKKFEPWSLVEEEKSDVFNIEEDAVEIGKSRDEIKEVDTESSEDARKLEKEEQELSAILKG
        +  DQGA GDIFA VE+E+RGNKD +G NEWV A KFEPW LVEEEKSDVFNI+EDAVEIGK RDEIKEVD+ESSEDARKLEKEEQEL+AILKG
Subjt:  KGEDQGAEGDIFASVEEEVRGNKDGNGDNEWVTAKKFEPWSLVEEEKSDVFNIEEDAVEIGKSRDEIKEVDTESSEDARKLEKEEQELSAILKG

XP_022972996.1 28S ribosomal protein S9, mitochondrial [Cucurbita maxima]2.8e-8182.99Show/hide
Query:  MLSRLLAKPSHFRLLALISTKPPAQTPSFHLIPRFFSTNNNGSNNNRNSGSRDQPTSNVWKISQQNDENFDELFTQEADNLDGIAEDDSAAGNDDSWVRS
        MLSRLL KPSHFRLL LISTKPPAQ P FH++PRFFS++NNGSNNN+N GSRDQPTSNVWK+S+++DENFD+LFTQEADNLDGIAEDDSA  NDD+WVRS
Subjt:  MLSRLLAKPSHFRLLALISTKPPAQTPSFHLIPRFFSTNNNGSNNNRNSGSRDQPTSNVWKISQQNDENFDELFTQEADNLDGIAEDDSAAGNDDSWVRS

Query:  KGEDQGAEGDIFASVEEEVRGNKDGNGDNEWVTAKKFEPWSLVEEEKSDVFNIEEDAVEIGKSRDEIKEVDTESSEDARKLEKEEQELSAILKG
        +  DQGA GDIFA VE+E+RG+KDG+G NEWVTA K EPWSLVEEEKSDVFNI+EDAVEIGKSRDEIKEVD+ESSEDARKLEKEEQEL+AILKG
Subjt:  KGEDQGAEGDIFASVEEEVRGNKDGNGDNEWVTAKKFEPWSLVEEEKSDVFNIEEDAVEIGKSRDEIKEVDTESSEDARKLEKEEQELSAILKG

XP_038874636.1 30S ribosomal protein S9, mitochondrial isoform X1 [Benincasa hispida]5.5e-8588.14Show/hide
Query:  MLSRLLAKPSHFRLLALISTKPPAQTPSFHLIPRFFSTNNNGSNNNRNSGSRDQPTSNVWKISQQNDENFDELFTQEADNLDGIAEDDSAAGNDDSWVRS
        MLSRLL KPSHFRLL LISTKPPAQTPSFHL+ R FST+NNGSNNNRNSGSRDQPTSNVWKISQ+ND NFD+LFTQEAD+LD IAEDDSA GNDDSWV S
Subjt:  MLSRLLAKPSHFRLLALISTKPPAQTPSFHLIPRFFSTNNNGSNNNRNSGSRDQPTSNVWKISQQNDENFDELFTQEADNLDGIAEDDSAAGNDDSWVRS

Query:  KGEDQGAEGDIFASVEEEVRGNKDGNGDNEWVTAKKFEPWSLVEEEKSDVFNIEEDAVEIGKSRDEIKEVDTESSEDARKLEKEEQELSAILKG
        KGEDQGAEGDIFAS+E+EVRGNKDG+GDNEWVTAKKFEPWSLVEEEKSDVFNIEE AVEIG+S DE KEVD++SSEDARKLEKEEQEL+AILKG
Subjt:  KGEDQGAEGDIFASVEEEVRGNKDGNGDNEWVTAKKFEPWSLVEEEKSDVFNIEEDAVEIGKSRDEIKEVDTESSEDARKLEKEEQELSAILKG

XP_038874637.1 30S ribosomal protein S9, mitochondrial isoform X2 [Benincasa hispida]5.5e-8588.14Show/hide
Query:  MLSRLLAKPSHFRLLALISTKPPAQTPSFHLIPRFFSTNNNGSNNNRNSGSRDQPTSNVWKISQQNDENFDELFTQEADNLDGIAEDDSAAGNDDSWVRS
        MLSRLL KPSHFRLL LISTKPPAQTPSFHL+ R FST+NNGSNNNRNSGSRDQPTSNVWKISQ+ND NFD+LFTQEAD+LD IAEDDSA GNDDSWV S
Subjt:  MLSRLLAKPSHFRLLALISTKPPAQTPSFHLIPRFFSTNNNGSNNNRNSGSRDQPTSNVWKISQQNDENFDELFTQEADNLDGIAEDDSAAGNDDSWVRS

Query:  KGEDQGAEGDIFASVEEEVRGNKDGNGDNEWVTAKKFEPWSLVEEEKSDVFNIEEDAVEIGKSRDEIKEVDTESSEDARKLEKEEQELSAILKG
        KGEDQGAEGDIFAS+E+EVRGNKDG+GDNEWVTAKKFEPWSLVEEEKSDVFNIEE AVEIG+S DE KEVD++SSEDARKLEKEEQEL+AILKG
Subjt:  KGEDQGAEGDIFASVEEEVRGNKDGNGDNEWVTAKKFEPWSLVEEEKSDVFNIEEDAVEIGKSRDEIKEVDTESSEDARKLEKEEQELSAILKG

XP_038874638.1 30S ribosomal protein S9, mitochondrial isoform X3 [Benincasa hispida]5.5e-8588.14Show/hide
Query:  MLSRLLAKPSHFRLLALISTKPPAQTPSFHLIPRFFSTNNNGSNNNRNSGSRDQPTSNVWKISQQNDENFDELFTQEADNLDGIAEDDSAAGNDDSWVRS
        MLSRLL KPSHFRLL LISTKPPAQTPSFHL+ R FST+NNGSNNNRNSGSRDQPTSNVWKISQ+ND NFD+LFTQEAD+LD IAEDDSA GNDDSWV S
Subjt:  MLSRLLAKPSHFRLLALISTKPPAQTPSFHLIPRFFSTNNNGSNNNRNSGSRDQPTSNVWKISQQNDENFDELFTQEADNLDGIAEDDSAAGNDDSWVRS

Query:  KGEDQGAEGDIFASVEEEVRGNKDGNGDNEWVTAKKFEPWSLVEEEKSDVFNIEEDAVEIGKSRDEIKEVDTESSEDARKLEKEEQELSAILKG
        KGEDQGAEGDIFAS+E+EVRGNKDG+GDNEWVTAKKFEPWSLVEEEKSDVFNIEE AVEIG+S DE KEVD++SSEDARKLEKEEQEL+AILKG
Subjt:  KGEDQGAEGDIFASVEEEVRGNKDGNGDNEWVTAKKFEPWSLVEEEKSDVFNIEEDAVEIGKSRDEIKEVDTESSEDARKLEKEEQELSAILKG

TrEMBL top hitse value%identityAlignment
A0A1S3ATW2 28S ribosomal protein S9, mitochondrial9.6e-7577.72Show/hide
Query:  MLSRLLAKPSHFRLLALISTKPPAQTPSFHLIPRFFSTNNNGSNNNRNSGSRDQPTSNVWKISQQNDENFDELFTQEADNLDGIAEDDSAAGNDDSWVRS
        MLSRLL KPSH RLLALISTKPPAQTPSFHL+PRFFSTNNNGSNNN NSGSRDQPTSN+WKISQ+NDENFD+LFTQEADNLDGIAE+DSA  NDDSWV S
Subjt:  MLSRLLAKPSHFRLLALISTKPPAQTPSFHLIPRFFSTNNNGSNNNRNSGSRDQPTSNVWKISQQNDENFDELFTQEADNLDGIAEDDSAAGNDDSWVRS

Query:  KGEDQGAEGDIFASVEEEVRGNKDGNGDNEWVTAKKFEPWSLVEEEKSDVFNIEEDAVEIGKSRDEIKEVDTESSEDARKLEK--------EEQELSAIL
        K  D+ AEGDIFAS+E+EV+GNKDG+G + W   KKF+ WSLVE+EKSDVFNIEE   +IG+ RDE+KEVDTES EDARKLEK        EEQEL+AIL
Subjt:  KGEDQGAEGDIFASVEEEVRGNKDGNGDNEWVTAKKFEPWSLVEEEKSDVFNIEEDAVEIGKSRDEIKEVDTESSEDARKLEK--------EEQELSAIL

Query:  KG
        KG
Subjt:  KG

A0A5A7SLF3 28S ribosomal protein S91.0e-7678.05Show/hide
Query:  MLSRLLAKPSHFRLLALISTKPPAQTPSFHLIPRFFSTNNNGSNNNRNSGSRDQPTSNVWKISQQNDENFDELFTQEADNLDGIAEDDSAAGNDDSWVRS
        MLSRLL KPSH RLLALISTKPPAQTPSFHL+PRFFSTNNNGSNNN NSGSRDQPTSN+WKISQ+NDENFD+LFTQEADNLDGIAE+DSA  NDDSWV S
Subjt:  MLSRLLAKPSHFRLLALISTKPPAQTPSFHLIPRFFSTNNNGSNNNRNSGSRDQPTSNVWKISQQNDENFDELFTQEADNLDGIAEDDSAAGNDDSWVRS

Query:  KGEDQGAEGDIFASVEEEVRGNKDGNGDNEWVTAKKFEPWSLVEEEKSDVFNIEEDAVEIGKSRDEIKEVDTESSEDARKLEK--------EEQELSAIL
        K  D+ AEGDIFAS+E+EV+GNKDG+G + W   KKF+ WSLVE+EKSDVFNIEE   +IG+ RDE+KEVDTES EDARKLEK        EEQEL+AIL
Subjt:  KGEDQGAEGDIFASVEEEVRGNKDGNGDNEWVTAKKFEPWSLVEEEKSDVFNIEEDAVEIGKSRDEIKEVDTESSEDARKLEK--------EEQELSAIL

Query:  KGKFF
        KGKFF
Subjt:  KGKFF

A0A6J1DZS9 28S ribosomal protein S9, mitochondrial8.4e-7980.41Show/hide
Query:  MLSRLLAKPSHFRLLALISTKPPAQTPSFHLIPRFFSTNNNGSNNNRNSGSRDQPTSNVWKISQQNDENFDELFTQEADNLDGIAEDDSAAGNDDSWVRS
        MLSRLL KPSHF+LLALISTKPP Q+PSF L+PRFFSTN+NGSNNN++SGSRDQPTSNVWK+SQ+ND NFD+LFTQ+ +NLDGIAEDDSAA +DDSWVRS
Subjt:  MLSRLLAKPSHFRLLALISTKPPAQTPSFHLIPRFFSTNNNGSNNNRNSGSRDQPTSNVWKISQQNDENFDELFTQEADNLDGIAEDDSAAGNDDSWVRS

Query:  KGEDQGAEGDIFASVEEEVRGNKDGNGDNEWVTAKKFEPWSLVEEEKSDVFNIEEDAVEIGKSRDEIKEVDTESSEDARKLEKEEQELSAILKG
        K  D+GAEGD+FAS+E+E++GNKDG GDNEWVTAKK+EPWSLVEEEKSDVFNIEE  VEIG+SRDE +EVD  SSEDA+KLEKEEQEL+A+LKG
Subjt:  KGEDQGAEGDIFASVEEEVRGNKDGNGDNEWVTAKKFEPWSLVEEEKSDVFNIEEDAVEIGKSRDEIKEVDTESSEDARKLEKEEQELSAILKG

A0A6J1E6E6 28S ribosomal protein S9, mitochondrial8.9e-8182.99Show/hide
Query:  MLSRLLAKPSHFRLLALISTKPPAQTPSFHLIPRFFSTNNNGSNNNRNSGSRDQPTSNVWKISQQNDENFDELFTQEADNLDGIAEDDSAAGNDDSWVRS
        MLSRLL KPSHFRLL LISTKPPAQ+P FHL+PRFFS++NNGSNNN+N GSRDQPTSNVWK+S+++DENFD+LFTQEADNLDGIAEDDSA  N DSWVRS
Subjt:  MLSRLLAKPSHFRLLALISTKPPAQTPSFHLIPRFFSTNNNGSNNNRNSGSRDQPTSNVWKISQQNDENFDELFTQEADNLDGIAEDDSAAGNDDSWVRS

Query:  KGEDQGAEGDIFASVEEEVRGNKDGNGDNEWVTAKKFEPWSLVEEEKSDVFNIEEDAVEIGKSRDEIKEVDTESSEDARKLEKEEQELSAILKG
        +  DQGA GDIFA VE+E+RGNKD +G NEWV A KFEPWSLVEEEKSDVFNI+EDAVEIGK RDEIKEVD+ESSEDARKLEKEEQEL+AILKG
Subjt:  KGEDQGAEGDIFASVEEEVRGNKDGNGDNEWVTAKKFEPWSLVEEEKSDVFNIEEDAVEIGKSRDEIKEVDTESSEDARKLEKEEQELSAILKG

A0A6J1I7H1 28S ribosomal protein S9, mitochondrial1.4e-8182.99Show/hide
Query:  MLSRLLAKPSHFRLLALISTKPPAQTPSFHLIPRFFSTNNNGSNNNRNSGSRDQPTSNVWKISQQNDENFDELFTQEADNLDGIAEDDSAAGNDDSWVRS
        MLSRLL KPSHFRLL LISTKPPAQ P FH++PRFFS++NNGSNNN+N GSRDQPTSNVWK+S+++DENFD+LFTQEADNLDGIAEDDSA  NDD+WVRS
Subjt:  MLSRLLAKPSHFRLLALISTKPPAQTPSFHLIPRFFSTNNNGSNNNRNSGSRDQPTSNVWKISQQNDENFDELFTQEADNLDGIAEDDSAAGNDDSWVRS

Query:  KGEDQGAEGDIFASVEEEVRGNKDGNGDNEWVTAKKFEPWSLVEEEKSDVFNIEEDAVEIGKSRDEIKEVDTESSEDARKLEKEEQELSAILKG
        +  DQGA GDIFA VE+E+RG+KDG+G NEWVTA K EPWSLVEEEKSDVFNI+EDAVEIGKSRDEIKEVD+ESSEDARKLEKEEQEL+AILKG
Subjt:  KGEDQGAEGDIFASVEEEVRGNKDGNGDNEWVTAKKFEPWSLVEEEKSDVFNIEEDAVEIGKSRDEIKEVDTESSEDARKLEKEEQELSAILKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTTCTCGTTTACTTGCTAAACCCTCCCATTTCAGATTACTCGCCTTGATTTCCACTAAACCACCAGCTCAAACTCCTAGTTTTCATCTCATTCCCCGATTCTTCTC
CACCAATAACAATGGAAGTAATAACAATAGGAACAGTGGAAGCAGAGACCAACCGACGAGCAATGTCTGGAAAATTTCACAGCAAAACGATGAAAATTTCGACGAATTGT
TCACTCAGGAAGCTGACAACCTTGACGGTATTGCGGAGGACGACTCTGCTGCGGGAAACGACGATTCATGGGTGAGGTCGAAGGGCGAGGATCAGGGTGCCGAAGGGGAT
ATTTTTGCGAGCGTGGAGGAGGAAGTTCGAGGAAATAAAGATGGCAATGGTGATAATGAATGGGTCACGGCGAAAAAATTCGAACCGTGGAGCCTGGTAGAGGAAGAAAA
GAGCGATGTCTTCAACATTGAGGAGGATGCAGTCGAAATTGGTAAATCCAGAGATGAGATTAAGGAAGTGGATACTGAAAGCAGTGAGGATGCTAGGAAGCTCGAGAAGG
AGGAGCAGGAACTCTCTGCCATCCTTAAAGGCAAGTTTTTCTCCCCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTTCTCGTTTACTTGCTAAACCCTCCCATTTCAGATTACTCGCCTTGATTTCCACTAAACCACCAGCTCAAACTCCTAGTTTTCATCTCATTCCCCGATTCTTCTC
CACCAATAACAATGGAAGTAATAACAATAGGAACAGTGGAAGCAGAGACCAACCGACGAGCAATGTCTGGAAAATTTCACAGCAAAACGATGAAAATTTCGACGAATTGT
TCACTCAGGAAGCTGACAACCTTGACGGTATTGCGGAGGACGACTCTGCTGCGGGAAACGACGATTCATGGGTGAGGTCGAAGGGCGAGGATCAGGGTGCCGAAGGGGAT
ATTTTTGCGAGCGTGGAGGAGGAAGTTCGAGGAAATAAAGATGGCAATGGTGATAATGAATGGGTCACGGCGAAAAAATTCGAACCGTGGAGCCTGGTAGAGGAAGAAAA
GAGCGATGTCTTCAACATTGAGGAGGATGCAGTCGAAATTGGTAAATCCAGAGATGAGATTAAGGAAGTGGATACTGAAAGCAGTGAGGATGCTAGGAAGCTCGAGAAGG
AGGAGCAGGAACTCTCTGCCATCCTTAAAGGCAAGTTTTTCTCCCCCTAG
Protein sequenceShow/hide protein sequence
MLSRLLAKPSHFRLLALISTKPPAQTPSFHLIPRFFSTNNNGSNNNRNSGSRDQPTSNVWKISQQNDENFDELFTQEADNLDGIAEDDSAAGNDDSWVRSKGEDQGAEGD
IFASVEEEVRGNKDGNGDNEWVTAKKFEPWSLVEEEKSDVFNIEEDAVEIGKSRDEIKEVDTESSEDARKLEKEEQELSAILKGKFFSP