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HG10008981 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10008981
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTumor necrosis factor receptor family protein
Genome locationChr06:1341507..1342048
RNA-Seq ExpressionHG10008981
SyntenyHG10008981
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035535.1 hypothetical protein SDJN02_02332 [Cucurbita argyrosperma subsp. argyrosperma]3.4e-3192.11Show/hide
Query:  WLRSIQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
        WLR IQ I NADGGGGSAGLVFSTFARYFSR RAENLRKINPKLTPQ+ASLVAQDLYGVVKQHGPLTVSNAW KAQ
Subjt:  WLRSIQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
XP_004145885.1 uncharacterized protein LOC101211684 [Cucumis sativus]8.8e-3289.61Show/hide
Query:  MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
        MW RSIQRIGNADGGGG AGLVF+TFAR+FSRKRAENLRKINPKLTPQ+ASLVAQDLYGVV+QHGPLT+SNAW KAQ
Subjt:  MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
XP_022159821.1 uncharacterized protein LOC111026127 [Momordica charantia]2.3e-3290.91Show/hide
Query:  MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
        MWLR  QRIG+ADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQ+ASLVAQDLYGVVKQHGPL++SNAW KAQ
Subjt:  MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
XP_022996189.1 uncharacterized protein LOC111491495 [Cucurbita maxima]3.4e-3192.11Show/hide
Query:  WLRSIQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
        WLR IQ I NADGGGGSAGLVFSTFARYFSR RAENLRKINPKLTPQ+ASLVAQDLYGVVKQHGPLTVSNAW KAQ
Subjt:  WLRSIQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
XP_038876162.1 uncharacterized protein LOC120068455 [Benincasa hispida]1.9e-3497.4Show/hide
Query:  MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
        MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQ+ASLVAQDLYGVVKQHGPLTVSNAW KAQ
Subjt:  MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
TrEMBL top hitse value%identityAlignment
A0A0A0KK52 Uncharacterized protein4.3e-3289.61Show/hide
Query:  MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
        MW RSIQRIGNADGGGG AGLVF+TFAR+FSRKRAENLRKINPKLTPQ+ASLVAQDLYGVV+QHGPLT+SNAW KAQ
Subjt:  MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
A0A1S3ATS9 uncharacterized protein LOC1034828884.7e-3187.01Show/hide
Query:  MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
        MW RSIQRIGN DGGGG  GLVF+TFAR+FSRKRAENLRKINPKLTPQ+ASLVAQDLYGV++QHGPLTVSNAW KAQ
Subjt:  MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
A0A6J1E538 uncharacterized protein LOC1110261271.1e-3290.91Show/hide
Query:  MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
        MWLR  QRIG+ADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQ+ASLVAQDLYGVVKQHGPL++SNAW KAQ
Subjt:  MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
A0A6J1H3U5 uncharacterized protein LOC1114598524.7e-3190.79Show/hide
Query:  WLRSIQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
        WLR IQ I NADGGGGSAGLVFSTF RYFSR RAENLRKINPKLTPQ+ASLVAQDLYGVVKQHGPLTVSNAW KAQ
Subjt:  WLRSIQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
A0A6J1K817 uncharacterized protein LOC1114914951.6e-3192.11Show/hide
Query:  WLRSIQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
        WLR IQ I NADGGGGSAGLVFSTFARYFSR RAENLRKINPKLTPQ+ASLVAQDLYGVVKQHGPLTVSNAW KAQ
Subjt:  WLRSIQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G73940.1 unknown protein9.2e-1144.87Show/hide
Query:  ADGGGG-----SAGLVF-------STFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ
        A GGGG      A  +F       S   RY SR+RA N+RKINPK+  Q+A  ++  LY + K HGPL+V N W +AQ
Subjt:  ADGGGG-----SAGLVF-------STFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGCTTCGCAGTATCCAAAGAATTGGAAATGCAGATGGAGGTGGAGGTTCTGCTGGCCTTGTGTTCAGCACATTTGCGAGGTATTTCTCGAGGAAGCGGGCAGAGAA
TCTTAGGAAGATCAATCCCAAGTTGACTCCTCAGGACGCTTCTTTGGTTGCTCAAGATCTCTATGGTGTTGTCAAGCAGCACGGCCCTCTCACCGTTTCCAATGCTTGGA
CTAAAGCTCAGTATCGTCATGCTAAATTGTTTGGATTTCTCATAGTGAAGACATTCAACCACGAGTTGCTTGATCTAGGCTATGTTAACTCAGCGGCCACATTAGCTAAA
GCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGCTTCGCAGTATCCAAAGAATTGGAAATGCAGATGGAGGTGGAGGTTCTGCTGGCCTTGTGTTCAGCACATTTGCGAGGTATTTCTCGAGGAAGCGGGCAGAGAA
TCTTAGGAAGATCAATCCCAAGTTGACTCCTCAGGACGCTTCTTTGGTTGCTCAAGATCTCTATGGTGTTGTCAAGCAGCACGGCCCTCTCACCGTTTCCAATGCTTGGA
CTAAAGCTCAGTATCGTCATGCTAAATTGTTTGGATTTCTCATAGTGAAGACATTCAACCACGAGTTGCTTGATCTAGGCTATGTTAACTCAGCGGCCACATTAGCTAAA
GCCTGA
Protein sequenceShow/hide protein sequence
MWLRSIQRIGNADGGGGSAGLVFSTFARYFSRKRAENLRKINPKLTPQDASLVAQDLYGVVKQHGPLTVSNAWTKAQYRHAKLFGFLIVKTFNHELLDLGYVNSAATLAK
A