CuGenDBv2

Gene ID	HG10009019
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Zinc finger matrin-type protein 1, putative isoform 1
Genome location	Chr06:1746615..1748438
RNA-Seq Expression	HG10009019
Synteny	HG10009019
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0042655.1 Zinc finger matrin-type protein 1, putative isoform 1 [Cucumis melo var. makuwa]

1.8e-112

87.45

Show/hide

Query:  MITLASAYLSSSPSNLSSLKNLRLFKPSSTFSPSLSNLKPLNPFLKPPSNQSRIGNGICRAELGNDAPFAIAIGACILSSLVFPAADGASDDESDAVIDS
        MITLAS Y SS     SS K+LRLFKPSSTFSPSLSNLKPLNPFLKPPSNQ+R GNGICRAELGNDAPFAIAIGAC L+SLV PAAD ASDDESDAVIDS
Subjt:  MITLASAYLSSSPSNLSSLKNLRLFKPSSTFSPSLSNLKPLNPFLKPPSNQSRIGNGICRAELGNDAPFAIAIGACILSSLVFPAADGASDDESDAVIDS

Query:  TDTRLAVMSIISFIPYFNWLSWVFAWLDSGRRLYAVYAIVYLVPYLRSNLSLSPEESWLPIVSILLCIIHIQLEVSITNGDIQPLQLFGKASKQISSTKK
        TDTRLAVM IISFIPYFNWLSWVFAWLDSGRRLYAVYAIVYL PYLRSNLSLSPEESWLPIVSILLCIIHIQLE SITNGDIQPLQ+FGKASKQISSTKK
Subjt:  TDTRLAVMSIISFIPYFNWLSWVFAWLDSGRRLYAVYAIVYLVPYLRSNLSLSPEESWLPIVSILLCIIHIQLEVSITNGDIQPLQLFGKASKQISSTKK

Query:  GRDHFKGSQGPYKESGKKQDRELPSSEEQFRDKIRRWGDSKETLDNEQSNGEWDD
        GRD FKGSQG YKES KK+DR+LPS+EE+FRDKI R GDSKET D+EQ N EWDD
Subjt:  GRDHFKGSQGPYKESGKKQDRELPSSEEQFRDKIRRWGDSKETLDNEQSNGEWDD

XP_004143845.1 uncharacterized protein LOC101203490 [Cucumis sativus]

6.6e-115

87.84

Show/hide

Query:  MITLASAYLSSSPSNLSSLKNLRLFKPSSTFSPSLSNLKPLNPFLKPPSNQSRIGNGICRAELGNDAPFAIAIGACILSSLVFPAADGASDDESDAVIDS
        MITLAS Y S     LSS KNLRLFKPSSTFSPSLSNLKPLNPFLKP SNQ+R GNGICRAELGNDAPFAIAIGACIL+SLV PAADGASDDESDAVIDS
Subjt:  MITLASAYLSSSPSNLSSLKNLRLFKPSSTFSPSLSNLKPLNPFLKPPSNQSRIGNGICRAELGNDAPFAIAIGACILSSLVFPAADGASDDESDAVIDS

Query:  TDTRLAVMSIISFIPYFNWLSWVFAWLDSGRRLYAVYAIVYLVPYLRSNLSLSPEESWLPIVSILLCIIHIQLEVSITNGDIQPLQLFGKASKQISSTKK
        TDTRLAVM IISFIPYFNWLSWVFAWLDSGRR YAVYAIVYL PYLRSNLSLSPEESWLPI+SILLCIIHIQLE SITNGDIQPLQ+FGKASK+ISSTKK
Subjt:  TDTRLAVMSIISFIPYFNWLSWVFAWLDSGRRLYAVYAIVYLVPYLRSNLSLSPEESWLPIVSILLCIIHIQLEVSITNGDIQPLQLFGKASKQISSTKK

Query:  GRDHFKGSQGPYKESGKKQDRELPSSEEQFRDKIRRWGDSKETLDNEQSNGEWDD
        GRD FKGSQG YKES KK DR+LPS+EE+FRDKI R GD+KETLD+EQSNGEWDD
Subjt:  GRDHFKGSQGPYKESGKKQDRELPSSEEQFRDKIRRWGDSKETLDNEQSNGEWDD

XP_008437440.1 PREDICTED: uncharacterized protein LOC103482855 isoform X1 [Cucumis melo]

6.8e-112

87.06

Show/hide

Query:  MITLASAYLSSSPSNLSSLKNLRLFKPSSTFSPSLSNLKPLNPFLKPPSNQSRIGNGICRAELGNDAPFAIAIGACILSSLVFPAADGASDDESDAVIDS
        MITLAS + SS     SS K+LRLFKPSSTFSPSLSNLKPLNPFLKPPSNQ+R GNGICRAELGNDAPFAIAIGAC L+SLV PAAD ASDDESDAVIDS
Subjt:  MITLASAYLSSSPSNLSSLKNLRLFKPSSTFSPSLSNLKPLNPFLKPPSNQSRIGNGICRAELGNDAPFAIAIGACILSSLVFPAADGASDDESDAVIDS

Query:  TDTRLAVMSIISFIPYFNWLSWVFAWLDSGRRLYAVYAIVYLVPYLRSNLSLSPEESWLPIVSILLCIIHIQLEVSITNGDIQPLQLFGKASKQISSTKK
        TDTRLAVM IISFIPYFNWLSWVFAWLDSGRRLYAVYAIVYL PYLRSNLSLSPEESWLPIVSILLCIIHIQLE SITNGDIQPLQ+FGKASKQISSTKK
Subjt:  TDTRLAVMSIISFIPYFNWLSWVFAWLDSGRRLYAVYAIVYLVPYLRSNLSLSPEESWLPIVSILLCIIHIQLEVSITNGDIQPLQLFGKASKQISSTKK

Query:  GRDHFKGSQGPYKESGKKQDRELPSSEEQFRDKIRRWGDSKETLDNEQSNGEWDD
        GRD FKGSQG YKES KK+DR+LPS+EE+FRDKI R GDSKET D+EQ N EWDD
Subjt:  GRDHFKGSQGPYKESGKKQDRELPSSEEQFRDKIRRWGDSKETLDNEQSNGEWDD

XP_022131237.1 uncharacterized protein LOC111004499 [Momordica charantia]

3.0e-107

82.35

Show/hide

Query:  MITLASAYLSSSPSNLSSLKNLRLFKPSSTFSPSLSNLKPLNPFLKPPSNQSRIGNGICRAELGNDAPFAIAIGACILSSLVFPAADGASDDESDAVIDS
        MI+LA A LSSSPSNLSSLK LRL +P STFS SLSNLK LNP  K  S+Q RIGNG+CRA+LGND PFA+AIGACILSS VFP A G SDDESDAVIDS
Subjt:  MITLASAYLSSSPSNLSSLKNLRLFKPSSTFSPSLSNLKPLNPFLKPPSNQSRIGNGICRAELGNDAPFAIAIGACILSSLVFPAADGASDDESDAVIDS

Query:  TDTRLAVMSIISFIPYFNWLSWVFAWLDSGRRLYAVYAIVYLVPYLRSNLSLSPEESWLPIVSILLCIIHIQLEVSITNGDIQPLQLFGKASKQISSTKK
        TDTR AVM IISFIPYFNWLSWVFAWLDSGRRLYAVYA+VYLVPYLRSNLSLSPEESWLPI SILLCIIHIQLEVSI NGDIQP Q+FGK SK+ISST +
Subjt:  TDTRLAVMSIISFIPYFNWLSWVFAWLDSGRRLYAVYAIVYLVPYLRSNLSLSPEESWLPIVSILLCIIHIQLEVSITNGDIQPLQLFGKASKQISSTKK

Query:  GRDHFKGSQGPYKESGKKQDRELPSSEEQFRDKIRRWGDSKETLDNEQSNGEWDD
        GRDHFKGSQGP +ESG+K+D +LPS +EQ RD+IRRWGDSKETLD+EQSNGEWDD
Subjt:  GRDHFKGSQGPYKESGKKQDRELPSSEEQFRDKIRRWGDSKETLDNEQSNGEWDD

XP_038875289.1 uncharacterized protein LOC120067780 [Benincasa hispida]

2.3e-128

94.9

Show/hide

Query:  MITLASAYLSSSPSNLSSLKNLRLFKPSSTFSPSLSNLKPLNPFLKPPSNQSRIGNGICRAELGNDAPFAIAIGACILSSLVFPAADGASDDESDAVIDS
        MITLASAYLSSS SNLSSLKNLRLFKPSSTFSPSLSNLKPLNPFLKPPSNQSRIGNGICRAELGNDAPFAIAIGAC LSSLV P ADGASDDESDA+IDS
Subjt:  MITLASAYLSSSPSNLSSLKNLRLFKPSSTFSPSLSNLKPLNPFLKPPSNQSRIGNGICRAELGNDAPFAIAIGACILSSLVFPAADGASDDESDAVIDS

Query:  TDTRLAVMSIISFIPYFNWLSWVFAWLDSGRRLYAVYAIVYLVPYLRSNLSLSPEESWLPIVSILLCIIHIQLEVSITNGDIQPLQLFGKASKQISSTKK
        TDTRLAVMSIISFIPYFNWLSWVFAWLDSGRRLYAVYAIVYL PYLRSNLSLSPEESWLPIVSILLCIIHIQLEVSITNGDIQPLQ+FGKASK ISSTKK
Subjt:  TDTRLAVMSIISFIPYFNWLSWVFAWLDSGRRLYAVYAIVYLVPYLRSNLSLSPEESWLPIVSILLCIIHIQLEVSITNGDIQPLQLFGKASKQISSTKK

Query:  GRDHFKGSQGPYKESGKKQDRELPSSEEQFRDKIRRWGDSKETLDNEQSNGEWDD
        GRDHFKGSQGPYKESGKK+DR+LPS+EEQF+DKIRRWGDSKE LDNEQSNGEWDD
Subjt:  GRDHFKGSQGPYKESGKKQDRELPSSEEQFRDKIRRWGDSKETLDNEQSNGEWDD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KK98 Uncharacterized protein

3.2e-115

87.84

Show/hide

Query:  MITLASAYLSSSPSNLSSLKNLRLFKPSSTFSPSLSNLKPLNPFLKPPSNQSRIGNGICRAELGNDAPFAIAIGACILSSLVFPAADGASDDESDAVIDS
        MITLAS Y S     LSS KNLRLFKPSSTFSPSLSNLKPLNPFLKP SNQ+R GNGICRAELGNDAPFAIAIGACIL+SLV PAADGASDDESDAVIDS
Subjt:  MITLASAYLSSSPSNLSSLKNLRLFKPSSTFSPSLSNLKPLNPFLKPPSNQSRIGNGICRAELGNDAPFAIAIGACILSSLVFPAADGASDDESDAVIDS

Query:  TDTRLAVMSIISFIPYFNWLSWVFAWLDSGRRLYAVYAIVYLVPYLRSNLSLSPEESWLPIVSILLCIIHIQLEVSITNGDIQPLQLFGKASKQISSTKK
        TDTRLAVM IISFIPYFNWLSWVFAWLDSGRR YAVYAIVYL PYLRSNLSLSPEESWLPI+SILLCIIHIQLE SITNGDIQPLQ+FGKASK+ISSTKK
Subjt:  TDTRLAVMSIISFIPYFNWLSWVFAWLDSGRRLYAVYAIVYLVPYLRSNLSLSPEESWLPIVSILLCIIHIQLEVSITNGDIQPLQLFGKASKQISSTKK

Query:  GRDHFKGSQGPYKESGKKQDRELPSSEEQFRDKIRRWGDSKETLDNEQSNGEWDD
        GRD FKGSQG YKES KK DR+LPS+EE+FRDKI R GD+KETLD+EQSNGEWDD
Subjt:  GRDHFKGSQGPYKESGKKQDRELPSSEEQFRDKIRRWGDSKETLDNEQSNGEWDD

A0A1S3AU53 uncharacterized protein LOC103482855 isoform X1

3.3e-112

87.06

Show/hide

Query:  MITLASAYLSSSPSNLSSLKNLRLFKPSSTFSPSLSNLKPLNPFLKPPSNQSRIGNGICRAELGNDAPFAIAIGACILSSLVFPAADGASDDESDAVIDS
        MITLAS + SS     SS K+LRLFKPSSTFSPSLSNLKPLNPFLKPPSNQ+R GNGICRAELGNDAPFAIAIGAC L+SLV PAAD ASDDESDAVIDS
Subjt:  MITLASAYLSSSPSNLSSLKNLRLFKPSSTFSPSLSNLKPLNPFLKPPSNQSRIGNGICRAELGNDAPFAIAIGACILSSLVFPAADGASDDESDAVIDS

Query:  TDTRLAVMSIISFIPYFNWLSWVFAWLDSGRRLYAVYAIVYLVPYLRSNLSLSPEESWLPIVSILLCIIHIQLEVSITNGDIQPLQLFGKASKQISSTKK
        TDTRLAVM IISFIPYFNWLSWVFAWLDSGRRLYAVYAIVYL PYLRSNLSLSPEESWLPIVSILLCIIHIQLE SITNGDIQPLQ+FGKASKQISSTKK
Subjt:  TDTRLAVMSIISFIPYFNWLSWVFAWLDSGRRLYAVYAIVYLVPYLRSNLSLSPEESWLPIVSILLCIIHIQLEVSITNGDIQPLQLFGKASKQISSTKK

Query:  GRDHFKGSQGPYKESGKKQDRELPSSEEQFRDKIRRWGDSKETLDNEQSNGEWDD
        GRD FKGSQG YKES KK+DR+LPS+EE+FRDKI R GDSKET D+EQ N EWDD
Subjt:  GRDHFKGSQGPYKESGKKQDRELPSSEEQFRDKIRRWGDSKETLDNEQSNGEWDD

A0A5D3C6U3 Zinc finger matrin-type protein 1, putative isoform 1

8.7e-113

87.45

Show/hide

Query:  MITLASAYLSSSPSNLSSLKNLRLFKPSSTFSPSLSNLKPLNPFLKPPSNQSRIGNGICRAELGNDAPFAIAIGACILSSLVFPAADGASDDESDAVIDS
        MITLAS Y SS     SS K+LRLFKPSSTFSPSLSNLKPLNPFLKPPSNQ+R GNGICRAELGNDAPFAIAIGAC L+SLV PAAD ASDDESDAVIDS
Subjt:  MITLASAYLSSSPSNLSSLKNLRLFKPSSTFSPSLSNLKPLNPFLKPPSNQSRIGNGICRAELGNDAPFAIAIGACILSSLVFPAADGASDDESDAVIDS

Query:  TDTRLAVMSIISFIPYFNWLSWVFAWLDSGRRLYAVYAIVYLVPYLRSNLSLSPEESWLPIVSILLCIIHIQLEVSITNGDIQPLQLFGKASKQISSTKK
        TDTRLAVM IISFIPYFNWLSWVFAWLDSGRRLYAVYAIVYL PYLRSNLSLSPEESWLPIVSILLCIIHIQLE SITNGDIQPLQ+FGKASKQISSTKK
Subjt:  TDTRLAVMSIISFIPYFNWLSWVFAWLDSGRRLYAVYAIVYLVPYLRSNLSLSPEESWLPIVSILLCIIHIQLEVSITNGDIQPLQLFGKASKQISSTKK

Query:  GRDHFKGSQGPYKESGKKQDRELPSSEEQFRDKIRRWGDSKETLDNEQSNGEWDD
        GRD FKGSQG YKES KK+DR+LPS+EE+FRDKI R GDSKET D+EQ N EWDD
Subjt:  GRDHFKGSQGPYKESGKKQDRELPSSEEQFRDKIRRWGDSKETLDNEQSNGEWDD

A0A6J1BQE6 uncharacterized protein LOC111004499

1.4e-107

82.35

Show/hide

Query:  MITLASAYLSSSPSNLSSLKNLRLFKPSSTFSPSLSNLKPLNPFLKPPSNQSRIGNGICRAELGNDAPFAIAIGACILSSLVFPAADGASDDESDAVIDS
        MI+LA A LSSSPSNLSSLK LRL +P STFS SLSNLK LNP  K  S+Q RIGNG+CRA+LGND PFA+AIGACILSS VFP A G SDDESDAVIDS
Subjt:  MITLASAYLSSSPSNLSSLKNLRLFKPSSTFSPSLSNLKPLNPFLKPPSNQSRIGNGICRAELGNDAPFAIAIGACILSSLVFPAADGASDDESDAVIDS

Query:  TDTRLAVMSIISFIPYFNWLSWVFAWLDSGRRLYAVYAIVYLVPYLRSNLSLSPEESWLPIVSILLCIIHIQLEVSITNGDIQPLQLFGKASKQISSTKK
        TDTR AVM IISFIPYFNWLSWVFAWLDSGRRLYAVYA+VYLVPYLRSNLSLSPEESWLPI SILLCIIHIQLEVSI NGDIQP Q+FGK SK+ISST +
Subjt:  TDTRLAVMSIISFIPYFNWLSWVFAWLDSGRRLYAVYAIVYLVPYLRSNLSLSPEESWLPIVSILLCIIHIQLEVSITNGDIQPLQLFGKASKQISSTKK

Query:  GRDHFKGSQGPYKESGKKQDRELPSSEEQFRDKIRRWGDSKETLDNEQSNGEWDD
        GRDHFKGSQGP +ESG+K+D +LPS +EQ RD+IRRWGDSKETLD+EQSNGEWDD
Subjt:  GRDHFKGSQGPYKESGKKQDRELPSSEEQFRDKIRRWGDSKETLDNEQSNGEWDD

A0A6J1H4A9 uncharacterized protein LOC111459865 isoform X2

1.2e-101

78.82

Show/hide

Query:  MITLASAYLSSSPSNLSSLKNLRLFKPSSTFSPSLSNLKPLNPFLKPPSNQSRIGNGICRAELGNDAPFAIAIGACILSSLVFPAADGASDDESDAVIDS
        MITLASAYLSSSPSN SSL  LRL KP  TFS SLSNLKPLNP  K  SNQ    NGICRAELGNDAPFAIAIGACILSSLV P A G SDD+SDAV+DS
Subjt:  MITLASAYLSSSPSNLSSLKNLRLFKPSSTFSPSLSNLKPLNPFLKPPSNQSRIGNGICRAELGNDAPFAIAIGACILSSLVFPAADGASDDESDAVIDS

Query:  TDTRLAVMSIISFIPYFNWLSWVFAWLDSGRRLYAVYAIVYLVPYLRSNLSLSPEESWLPIVSILLCIIHIQLEVSITNGDIQPLQLFGKASKQISSTKK
        TD RLAVM IISFIPYFNWLSWVFAWLDSG+R YAVYAIVYL PYLRSNLSLSP+ESWLPIVSIL+CI HIQ+E SI NGDIQP Q+FGK S QIS TK 
Subjt:  TDTRLAVMSIISFIPYFNWLSWVFAWLDSGRRLYAVYAIVYLVPYLRSNLSLSPEESWLPIVSILLCIIHIQLEVSITNGDIQPLQLFGKASKQISSTKK

Query:  GRDHFKGSQGPYKESGKKQDRELPSSEEQFRDKIRRWGDSKETLDNEQSNGEWDD
         R H KGSQGP K+SGKK+D +LPS+EEQ RD+I+ WGD KETLD+EQSN EWDD
Subjt:  GRDHFKGSQGPYKESGKKQDRELPSSEEQFRDKIRRWGDSKETLDNEQSNGEWDD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G41960.1 unknown protein

2.5e-48

53.52

Show/hide

Query:  MITLASAYLSSSPSNLSSLKNLRLFKPSSTFSPSLSNLKPLNPFLKPPSNQSRIGNGICRAELGNDAPFAIAIGACILSSLVFPAADGASDDESD---AV
        M +L+   +    S+ S     RL   SS+   S S L    P   P     +I   ICRAE   DAP   AIGACILSS VFP A   +D+E +   + 
Subjt:  MITLASAYLSSSPSNLSSLKNLRLFKPSSTFSPSLSNLKPLNPFLKPPSNQSRIGNGICRAELGNDAPFAIAIGACILSSLVFPAADGASDDESD---AV

Query:  IDSTDTRLAVMSIISFIPYFNWLSWVFAWLDSGRRLYAVYAIVYLVPYLRSNLSLSPEESWLPIVSILLCIIHIQLEVSITNGDIQPLQLFGKASKQISS
        I STD RLA M IISFIPYFNWLSWVFAWLD+G+  YAVYA+VYLVPYL SNLS+SPEESWLPI SI+L IIH+QLE SI NGD++ L  F   S    S
Subjt:  IDSTDTRLAVMSIISFIPYFNWLSWVFAWLDSGRRLYAVYAIVYLVPYLRSNLSLSPEESWLPIVSILLCIIHIQLEVSITNGDIQPLQLFGKASKQISS

Query:  TKKG---RDHFKG
        +KK    + HFKG
Subjt:  TKKG---RDHFKG

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGATCACTCTCGCTTCTGCTTATTTATCATCTTCCCCTTCCAATCTCTCTTCTCTCAAGAATCTTCGTCTCTTCAAACCCTCTTCCACATTCTCACCATCACTCTCTAA
TCTCAAACCCTTAAATCCTTTCCTCAAACCACCTTCCAATCAGAGCAGGATCGGGAATGGGATTTGTAGGGCCGAATTGGGTAACGACGCACCCTTCGCTATTGCGATCG
GTGCTTGTATTCTCAGTTCTCTTGTTTTTCCGGCTGCCGACGGTGCTTCCGATGATGAGAGCGATGCCGTCATTGATTCCACCGATACCAGGCTCGCCGTTATGAGCATC
ATTAGCTTTATCCCCTACTTCAATTGGCTGAGTTGGGTTTTTGCGTGGCTTGATTCTGGGAGAAGACTTTATGCTGTGTATGCAATCGTGTATTTGGTTCCTTACCTAAG
GTCAAACTTATCGTTGTCGCCCGAAGAGAGCTGGCTTCCTATTGTTAGTATACTTCTCTGCATTATTCACATTCAGCTTGAAGTGAGCATTACAAATGGAGATATTCAAC
CTCTCCAACTATTTGGGAAAGCTTCAAAGCAAATTTCTTCAACCAAGAAAGGGAGAGACCATTTCAAGGGGTCCCAAGGACCATACAAAGAGAGTGGAAAAAAACAGGAC
AGGGAGCTACCGTCGTCGGAGGAACAATTTCGAGATAAGATCAGAAGATGGGGAGATTCTAAAGAGACGTTAGATAATGAACAGTCAAATGGAGAATGGGATGATTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MITLASAYLSSSPSNLSSLKNLRLFKPSSTFSPSLSNLKPLNPFLKPPSNQSRIGNGICRAELGNDAPFAIAIGACILSSLVFPAADGASDDESDAVIDSTDTRLAVMSI
ISFIPYFNWLSWVFAWLDSGRRLYAVYAIVYLVPYLRSNLSLSPEESWLPIVSILLCIIHIQLEVSITNGDIQPLQLFGKASKQISSTKKGRDHFKGSQGPYKESGKKQD
RELPSSEEQFRDKIRRWGDSKETLDNEQSNGEWDD

HG10009019 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome