; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10009036 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10009036
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRING/U-box protein
Genome locationChr06:1887843..1897233
RNA-Seq ExpressionHG10009036
SyntenyHG10009036
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0046872 - metal ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR017907 - Zinc finger, RING-type, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042667.1 Zinc finger, RING-type [Cucumis melo var. makuwa]7.2e-8894.94Show/hide
Query:  MMEVGLVPSGIPEEETAEAYDINYEINEEAERCGICMDVIVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQKEFQLITCVPVYDTIGSNKVDEESFSRN
        MMEVG VPSG+ EEETAEAYDINYEI+EE ERCGICMDVIVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQKEFQLITCVPVYDTIGSNKVDEESF RN
Subjt:  MMEVGLVPSGIPEEETAEAYDINYEINEEAERCGICMDVIVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQKEFQLITCVPVYDTIGSNKVDEESFSRN

Query:  DDWCFEGKSNISFPSYYIDENAVICLDGDGCKIRNGNGFTEGESDLDTSIACDSCDTW
        DDWCFEGKSN+SFPSYYIDENAVICLDGDGCKIRNG+GFTEGESDLDTSIACDSCDTW
Subjt:  DDWCFEGKSNISFPSYYIDENAVICLDGDGCKIRNGNGFTEGESDLDTSIACDSCDTW

XP_008437417.1 PREDICTED: uncharacterized protein At4g10930-like [Cucumis melo]1.6e-8794.3Show/hide
Query:  MMEVGLVPSGIPEEETAEAYDINYEINEEAERCGICMDVIVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQKEFQLITCVPVYDTIGSNKVDEESFSRN
        MMEVG VPSG+ EEETAEAYDINYEI+EE ERCGICMDVIVDRGVLDCCQHW+CFVCIDNWATITNLCPLCQKEFQLITCVPVYDTIGSNKVDEESF RN
Subjt:  MMEVGLVPSGIPEEETAEAYDINYEINEEAERCGICMDVIVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQKEFQLITCVPVYDTIGSNKVDEESFSRN

Query:  DDWCFEGKSNISFPSYYIDENAVICLDGDGCKIRNGNGFTEGESDLDTSIACDSCDTW
        DDWCFEGKSN+SFPSYYIDENAVICLDGDGCKIRNG+GFTEGESDLDTSIACDSCDTW
Subjt:  DDWCFEGKSNISFPSYYIDENAVICLDGDGCKIRNGNGFTEGESDLDTSIACDSCDTW

XP_011654687.1 uncharacterized protein At4g10930 [Cucumis sativus]5.5e-8894.94Show/hide
Query:  MMEVGLVPSGIPEEETAEAYDINYEINEEAERCGICMDVIVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQKEFQLITCVPVYDTIGSNKVDEESFSRN
        MMEVG VPSGIPEEETAEAYDINYEI+E  ERCGICMDVIVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQKEFQLITCVPVYDTIGSNKV+EESF RN
Subjt:  MMEVGLVPSGIPEEETAEAYDINYEINEEAERCGICMDVIVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQKEFQLITCVPVYDTIGSNKVDEESFSRN

Query:  DDWCFEGKSNISFPSYYIDENAVICLDGDGCKIRNGNGFTEGESDLDTSIACDSCDTW
        DDWCFEGKSN+SFPSYYIDENAVICLDGDGCKIRNG+GFTEGESDLDTSIACDSCDTW
Subjt:  DDWCFEGKSNISFPSYYIDENAVICLDGDGCKIRNGNGFTEGESDLDTSIACDSCDTW

XP_023534362.1 uncharacterized protein At4g10930 isoform X1 [Cucurbita pepo subsp. pepo]2.8e-8794.94Show/hide
Query:  MMEVGLVPSGIPEEETAEAYDINYEINEEAERCGICMDVIVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQKEFQLITCVPVYDTIGSNKVDEESFSRN
        MME GLVPSG  EEETAEAYDINYE+++E ERCGICMDVIVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQKEFQLITCVPVYDTIGSNKVDEESFSRN
Subjt:  MMEVGLVPSGIPEEETAEAYDINYEINEEAERCGICMDVIVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQKEFQLITCVPVYDTIGSNKVDEESFSRN

Query:  DDWCFEGKSNISFPSYYIDENAVICLDGDGCKIRNGNGFTEGESDLDTSIACDSCDTW
        DDWCFEGKSNISFPSYYIDENAVICLDGDGCKIRNG+GFTEGESDLDTSIACDSCDTW
Subjt:  DDWCFEGKSNISFPSYYIDENAVICLDGDGCKIRNGNGFTEGESDLDTSIACDSCDTW

XP_038875492.1 uncharacterized protein At4g10930 isoform X1 [Benincasa hispida]6.6e-8996.84Show/hide
Query:  MMEVGLVPSGIPEEETAEAYDINYEINEEAERCGICMDVIVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQKEFQLITCVPVYDTIGSNKVDEESFSRN
        MMEVGLVPSGIPEEETAEAY+INYEI EE ERCGICMDVIVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQKEFQLITCVPVYDTIGSNKVDEESFSRN
Subjt:  MMEVGLVPSGIPEEETAEAYDINYEINEEAERCGICMDVIVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQKEFQLITCVPVYDTIGSNKVDEESFSRN

Query:  DDWCFEGKSNISFPSYYIDENAVICLDGDGCKIRNGNGFTEGESDLDTSIACDSCDTW
        DDWCFEGKSNISFPSYYIDENAVICLDGDGCKIRNG+GF EGESDLDTSIACDSCDTW
Subjt:  DDWCFEGKSNISFPSYYIDENAVICLDGDGCKIRNGNGFTEGESDLDTSIACDSCDTW

TrEMBL top hitse value%identityAlignment
A0A0A0KME1 Uncharacterized protein2.7e-8894.94Show/hide
Query:  MMEVGLVPSGIPEEETAEAYDINYEINEEAERCGICMDVIVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQKEFQLITCVPVYDTIGSNKVDEESFSRN
        MMEVG VPSGIPEEETAEAYDINYEI+E  ERCGICMDVIVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQKEFQLITCVPVYDTIGSNKV+EESF RN
Subjt:  MMEVGLVPSGIPEEETAEAYDINYEINEEAERCGICMDVIVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQKEFQLITCVPVYDTIGSNKVDEESFSRN

Query:  DDWCFEGKSNISFPSYYIDENAVICLDGDGCKIRNGNGFTEGESDLDTSIACDSCDTW
        DDWCFEGKSN+SFPSYYIDENAVICLDGDGCKIRNG+GFTEGESDLDTSIACDSCDTW
Subjt:  DDWCFEGKSNISFPSYYIDENAVICLDGDGCKIRNGNGFTEGESDLDTSIACDSCDTW

A0A1S3ATZ1 uncharacterized protein At4g10930-like7.8e-8894.3Show/hide
Query:  MMEVGLVPSGIPEEETAEAYDINYEINEEAERCGICMDVIVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQKEFQLITCVPVYDTIGSNKVDEESFSRN
        MMEVG VPSG+ EEETAEAYDINYEI+EE ERCGICMDVIVDRGVLDCCQHW+CFVCIDNWATITNLCPLCQKEFQLITCVPVYDTIGSNKVDEESF RN
Subjt:  MMEVGLVPSGIPEEETAEAYDINYEINEEAERCGICMDVIVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQKEFQLITCVPVYDTIGSNKVDEESFSRN

Query:  DDWCFEGKSNISFPSYYIDENAVICLDGDGCKIRNGNGFTEGESDLDTSIACDSCDTW
        DDWCFEGKSN+SFPSYYIDENAVICLDGDGCKIRNG+GFTEGESDLDTSIACDSCDTW
Subjt:  DDWCFEGKSNISFPSYYIDENAVICLDGDGCKIRNGNGFTEGESDLDTSIACDSCDTW

A0A5D3C421 Zinc finger, RING-type3.5e-8894.94Show/hide
Query:  MMEVGLVPSGIPEEETAEAYDINYEINEEAERCGICMDVIVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQKEFQLITCVPVYDTIGSNKVDEESFSRN
        MMEVG VPSG+ EEETAEAYDINYEI+EE ERCGICMDVIVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQKEFQLITCVPVYDTIGSNKVDEESF RN
Subjt:  MMEVGLVPSGIPEEETAEAYDINYEINEEAERCGICMDVIVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQKEFQLITCVPVYDTIGSNKVDEESFSRN

Query:  DDWCFEGKSNISFPSYYIDENAVICLDGDGCKIRNGNGFTEGESDLDTSIACDSCDTW
        DDWCFEGKSN+SFPSYYIDENAVICLDGDGCKIRNG+GFTEGESDLDTSIACDSCDTW
Subjt:  DDWCFEGKSNISFPSYYIDENAVICLDGDGCKIRNGNGFTEGESDLDTSIACDSCDTW

A0A6J1H3P9 uncharacterized protein At4g10930 isoform X13.9e-8794.3Show/hide
Query:  MMEVGLVPSGIPEEETAEAYDINYEINEEAERCGICMDVIVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQKEFQLITCVPVYDTIGSNKVDEESFSRN
        MME GLVPSG  EEETAE YDINYE+++E ERCGICMDVIVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQKEFQLITCVPVYDTIGSNKVDEESFSRN
Subjt:  MMEVGLVPSGIPEEETAEAYDINYEINEEAERCGICMDVIVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQKEFQLITCVPVYDTIGSNKVDEESFSRN

Query:  DDWCFEGKSNISFPSYYIDENAVICLDGDGCKIRNGNGFTEGESDLDTSIACDSCDTW
        DDWCFEGKSNISFPSYYIDENAVICLDGDGCKIRNG+GFTEGESDLDTSIACDSCDTW
Subjt:  DDWCFEGKSNISFPSYYIDENAVICLDGDGCKIRNGNGFTEGESDLDTSIACDSCDTW

A0A6J1K854 uncharacterized protein At4g10930 isoform X11.7e-8794.3Show/hide
Query:  MMEVGLVPSGIPEEETAEAYDINYEINEEAERCGICMDVIVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQKEFQLITCVPVYDTIGSNKVDEESFSRN
        MME GL+PSG  EEETAEAYDINYE+++E ERCGICMDVIVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQKEFQLITCVPVYDTIGSNKVDEESFSRN
Subjt:  MMEVGLVPSGIPEEETAEAYDINYEINEEAERCGICMDVIVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQKEFQLITCVPVYDTIGSNKVDEESFSRN

Query:  DDWCFEGKSNISFPSYYIDENAVICLDGDGCKIRNGNGFTEGESDLDTSIACDSCDTW
        DDWCFEGKSNISFPSYYIDENAVICLDGDGCKIRNG+GFTEGESDLDTSIACDSCDTW
Subjt:  DDWCFEGKSNISFPSYYIDENAVICLDGDGCKIRNGNGFTEGESDLDTSIACDSCDTW

SwissProt top hitse value%identityAlignment
P09309 E3 ubiquitin-protein ligase IE614.7e-0532.99Show/hide
Query:  CGICMDVIVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQKEFQLITCVPVYDTIGSNKVDEESFSRNDDWCFEGKSNISFPSYYIDENAVICLDGD
        C ICM  + D G    C H FCFVCI  W + +  CPLC+   Q I    ++  +      E     +DD   +G S  SF      E+++  L GD
Subjt:  CGICMDVIVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQKEFQLITCVPVYDTIGSNKVDEESFSRNDDWCFEGKSNISFPSYYIDENAVICLDGD

Q80Z37 E3 ubiquitin-protein ligase Topors2.3e-0440.43Show/hide
Query:  RCGICMDVIVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQKEFQLI
        +C IC+D   +   LD C H FCF C+  W+     CPLC++ F  I
Subjt:  RCGICMDVIVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQKEFQLI

Q9E1W2 E3 ubiquitin-protein ligase IE615.2e-0447.5Show/hide
Query:  CGICMDVIVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQ
        C ICM  I   G    C H FCFVCI  W + +  CPLC+
Subjt:  CGICMDVIVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQ

Q9NS56 E3 ubiquitin-protein ligase Topors2.3e-0440.43Show/hide
Query:  RCGICMDVIVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQKEFQLI
        +C IC+D   +   LD C H FCF C+  W+     CPLC++ F  I
Subjt:  RCGICMDVIVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQKEFQLI

Arabidopsis top hitse value%identityAlignment
AT2G15530.1 RING/U-box superfamily protein6.9e-0431.71Show/hide
Query:  VGLVPSGIPEEETAEAY---------DINYEINEEAERCGICMDVIVDRGVLDC--CQHWFCFVCIDNWATITNLCPLCQKE
        +G V +G+ EE   +A            + E+++  E C IC +  V+   L    C H F   CI  W  I NLCP+C+ E
Subjt:  VGLVPSGIPEEETAEAY---------DINYEINEEAERCGICMDVIVDRGVLDC--CQHWFCFVCIDNWATITNLCPLCQKE

AT2G15530.2 RING/U-box superfamily protein6.9e-0431.71Show/hide
Query:  VGLVPSGIPEEETAEAY---------DINYEINEEAERCGICMDVIVDRGVLDC--CQHWFCFVCIDNWATITNLCPLCQKE
        +G V +G+ EE   +A            + E+++  E C IC +  V+   L    C H F   CI  W  I NLCP+C+ E
Subjt:  VGLVPSGIPEEETAEAY---------DINYEINEEAERCGICMDVIVDRGVLDC--CQHWFCFVCIDNWATITNLCPLCQKE

AT3G05670.1 RING/U-box protein2.5e-0946Show/hide
Query:  CGICM---DVIVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQKEFQLIT
        CGIC+   D+   +G LDCC H+FCF CI  W+ + + CPLC++ F+ I+
Subjt:  CGICM---DVIVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQKEFQLIT

AT4G10940.1 RING/U-box protein1.9e-5460.98Show/hide
Query:  MEVGLVPSGIPEEETAEAYDINYEINEEAERCGICMDVIVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQKEFQLITCVPVYDTIGSNKVDEESFSRND
        ME+    S + E+E  E  + N     E ERCGICMD+I+DRGVLDCCQHWFCF CIDNW+TI NLCPLCQ+EFQLITCVPV+D+  S+KVDE+  S ++
Subjt:  MEVGLVPSGIPEEETAEAYDINYEINEEAERCGICMDVIVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQKEFQLITCVPVYDTIGSNKVDEESFSRND

Query:  DWCFEGKSN-ISFPS------YYIDENAVICLDGDGCKIRNGNGFTEGESDLDTSIACDSCDTW
        D C E +++ +S PS      +YIDENAV+CLDGD CKIRN   + EG+S+LDTSIACDSCD W
Subjt:  DWCFEGKSN-ISFPS------YYIDENAVICLDGDGCKIRNGNGFTEGESDLDTSIACDSCDTW

AT5G67120.1 RING/U-box superfamily protein2.2e-0542Show/hide
Query:  NEEAERCGICMDVIVDRGVLD--CCQHWFCFVCIDNWATITNLCPLCQKE
        ++E +RC IC   + D   +    C H F F CI NW  +TN CPLC +E
Subjt:  NEEAERCGICMDVIVDRGVLD--CCQHWFCFVCIDNWATITNLCPLCQKE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGAGGTGGGTTTGGTTCCAAGTGGGATACCGGAGGAAGAAACTGCAGAGGCTTATGATATCAATTATGAGATTAATGAGGAGGCGGAAAGATGTGGGATATGCAT
GGATGTCATTGTTGACAGGGGTGTTCTAGACTGCTGCCAGCACTGGTTCTGTTTTGTATGCATTGACAACTGGGCTACTATTACGAACCTTTGTCCACTTTGCCAGAAAG
AATTTCAACTCATCACATGTGTTCCAGTGTATGATACTATTGGGAGCAACAAAGTAGATGAAGAATCATTTAGCAGAAATGATGATTGGTGCTTTGAGGGGAAGAGTAAC
ATCTCCTTTCCGTCATACTATATTGACGAGAATGCAGTTATCTGCTTGGATGGTGACGGCTGTAAGATTAGAAATGGAAATGGATTTACTGAAGGAGAATCTGATCTTGA
TACCTCAATTGCTTGCGACTCTTGTGATACATGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGGAGGTGGGTTTGGTTCCAAGTGGGATACCGGAGGAAGAAACTGCAGAGGCTTATGATATCAATTATGAGATTAATGAGGAGGCGGAAAGATGTGGGATATGCAT
GGATGTCATTGTTGACAGGGGTGTTCTAGACTGCTGCCAGCACTGGTTCTGTTTTGTATGCATTGACAACTGGGCTACTATTACGAACCTTTGTCCACTTTGCCAGAAAG
AATTTCAACTCATCACATGTGTTCCAGTGTATGATACTATTGGGAGCAACAAAGTAGATGAAGAATCATTTAGCAGAAATGATGATTGGTGCTTTGAGGGGAAGAGTAAC
ATCTCCTTTCCGTCATACTATATTGACGAGAATGCAGTTATCTGCTTGGATGGTGACGGCTGTAAGATTAGAAATGGAAATGGATTTACTGAAGGAGAATCTGATCTTGA
TACCTCAATTGCTTGCGACTCTTGTGATACATGGTAA
Protein sequenceShow/hide protein sequence
MMEVGLVPSGIPEEETAEAYDINYEINEEAERCGICMDVIVDRGVLDCCQHWFCFVCIDNWATITNLCPLCQKEFQLITCVPVYDTIGSNKVDEESFSRNDDWCFEGKSN
ISFPSYYIDENAVICLDGDGCKIRNGNGFTEGESDLDTSIACDSCDTW