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HG10009061 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10009061
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionglycine-rich cell wall structural protein 1-like
Genome locationChr06:2129952..2130720
RNA-Seq ExpressionHG10009061
SyntenyHG10009061
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042689.1 uncharacterized protein E6C27_scaffold44G001870 [Cucumis melo var. makuwa]2.5e-2172.09Show/hide
Query:  MASLQCNKPADHGHSQHQQKHDQQH-NHCFGGHVSDKITGVF-KGHHHGQAPLASASAPVHHSANAGYCKPAGSKKKKEHHKNKEG
        MA  QC KPADH H QHQQKHDQQH +HCFGGHVSDKI GVF KGHHH QA    AS  VHHSAN  +CK +GSKKKKEH   KEG
Subjt:  MASLQCNKPADHGHSQHQQKHDQQH-NHCFGGHVSDKITGVF-KGHHHGQAPLASASAPVHHSANAGYCKPAGSKKKKEHHKNKEG

XP_008437383.1 PREDICTED: uncharacterized protein LOC103482815 [Cucumis melo]1.9e-3775.42Show/hide
Query:  MASLQCNKPADHGHSQHQQKHDQQH-NHCFGGHVSDKITGVF-KGHHHGQAPLASASAPVHHSANAGYCKPAGSKKKKEHHKNKEGGFFRKIKDVFSDHS
        MA  QC KPADH H QHQQKHDQQH +HCFGGHVSDKI GVF KGHHH QA    AS  VHHSAN  +CK +GSKKKKEH   KEGG   KIK+ FSDHS
Subjt:  MASLQCNKPADHGHSQHQQKHDQQH-NHCFGGHVSDKITGVF-KGHHHGQAPLASASAPVHHSANAGYCKPAGSKKKKEHHKNKEGGFFRKIKDVFSDHS

Query:  SDSSDSENECHKPHHNKK
        SDSSDSENECHKPHHNKK
Subjt:  SDSSDSENECHKPHHNKK

XP_022146004.1 uncharacterized protein LOC111015315 [Momordica charantia]4.6e-2364.41Show/hide
Query:  MASLQCNKPADHGHSQHQQKHDQQHNHCFGGHVSDKITGVFKGH-HHGQAPLASASAPVHHSANAGYCKPAG-SKKKKEHHKNKEGGFFRKIKDVFSDHS
        MASLQC+KPAD  HSQ+ QKHDQ   HCF GHVSDKI GVFKGH HHGQAP     A  HHS N      A  S K+KE HKNK+G    KIKD FSDHS
Subjt:  MASLQCNKPADHGHSQHQQKHDQQHNHCFGGHVSDKITGVFKGH-HHGQAPLASASAPVHHSANAGYCKPAG-SKKKKEHHKNKEGGFFRKIKDVFSDHS

Query:  SDSSDSENECHKPHHNKK
        SDSSDS+NE HK H   K
Subjt:  SDSSDSENECHKPHHNKK

XP_022958513.1 glycine-rich cell wall structural protein 1-like [Cucurbita moschata]2.6e-0541.23Show/hide
Query:  CNKPADHGHSQ-----HQQKHDQQHNH-CFGGHVSDKITGVFKGHHHGQAPLASASAPVHHSANAGYCKPAGSKKKKEHHKNKEGGFFRKIKDVFSDHSS
        C     HGH       H       H H   GGH          GH     P      P   S N G+CK AG  +KK HHKNKEGGF  KIKD FSDH S
Subjt:  CNKPADHGHSQ-----HQQKHDQQHNH-CFGGHVSDKITGVFKGHHHGQAPLASASAPVHHSANAGYCKPAGSKKKKEHHKNKEGGFFRKIKDVFSDHSS

Query:  DSSDSENECHKPHH
        D+SDS+++C +  H
Subjt:  DSSDSENECHKPHH

XP_038875375.1 uncharacterized protein LOC120067846 [Benincasa hispida]3.0e-4685.47Show/hide
Query:  MASLQCNKPADHGHSQHQQKHDQQHNHCFGGHVSDKITGVFKGHHHGQAPLASASAPVHHSANAGYCKPAGSKKKKEHHKNKEGGFFRKIKDVFSDHSSD
        MASLQCNKPADH     QQKHDQQH+HCFGGHVSDKI GVFKGHHHGQAPL  ASAPVHHSANA +CKP GSKKKKEHHKNKEGG   KIKD FSDHSSD
Subjt:  MASLQCNKPADHGHSQHQQKHDQQHNHCFGGHVSDKITGVFKGHHHGQAPLASASAPVHHSANAGYCKPAGSKKKKEHHKNKEGGFFRKIKDVFSDHSSD

Query:  SSDSENECHKPHHNKKN
        SSDSENEC KPHHNKKN
Subjt:  SSDSENECHKPHHNKKN

TrEMBL top hitse value%identityAlignment
A0A1S3AUH3 uncharacterized protein LOC1034828159.4e-3875.42Show/hide
Query:  MASLQCNKPADHGHSQHQQKHDQQH-NHCFGGHVSDKITGVF-KGHHHGQAPLASASAPVHHSANAGYCKPAGSKKKKEHHKNKEGGFFRKIKDVFSDHS
        MA  QC KPADH H QHQQKHDQQH +HCFGGHVSDKI GVF KGHHH QA    AS  VHHSAN  +CK +GSKKKKEH   KEGG   KIK+ FSDHS
Subjt:  MASLQCNKPADHGHSQHQQKHDQQH-NHCFGGHVSDKITGVF-KGHHHGQAPLASASAPVHHSANAGYCKPAGSKKKKEHHKNKEGGFFRKIKDVFSDHS

Query:  SDSSDSENECHKPHHNKK
        SDSSDSENECHKPHHNKK
Subjt:  SDSSDSENECHKPHHNKK

A0A5A7TMV4 Uncharacterized protein1.2e-2172.09Show/hide
Query:  MASLQCNKPADHGHSQHQQKHDQQH-NHCFGGHVSDKITGVF-KGHHHGQAPLASASAPVHHSANAGYCKPAGSKKKKEHHKNKEG
        MA  QC KPADH H QHQQKHDQQH +HCFGGHVSDKI GVF KGHHH QA    AS  VHHSAN  +CK +GSKKKKEH   KEG
Subjt:  MASLQCNKPADHGHSQHQQKHDQQH-NHCFGGHVSDKITGVF-KGHHHGQAPLASASAPVHHSANAGYCKPAGSKKKKEHHKNKEG

A0A6J1CWW2 uncharacterized protein LOC1110153152.2e-2364.41Show/hide
Query:  MASLQCNKPADHGHSQHQQKHDQQHNHCFGGHVSDKITGVFKGH-HHGQAPLASASAPVHHSANAGYCKPAG-SKKKKEHHKNKEGGFFRKIKDVFSDHS
        MASLQC+KPAD  HSQ+ QKHDQ   HCF GHVSDKI GVFKGH HHGQAP     A  HHS N      A  S K+KE HKNK+G    KIKD FSDHS
Subjt:  MASLQCNKPADHGHSQHQQKHDQQHNHCFGGHVSDKITGVFKGH-HHGQAPLASASAPVHHSANAGYCKPAG-SKKKKEHHKNKEGGFFRKIKDVFSDHS

Query:  SDSSDSENECHKPHHNKK
        SDSSDS+NE HK H   K
Subjt:  SDSSDSENECHKPHHNKK

A0A6J1H399 glycine-rich cell wall structural protein 1-like1.2e-0541.23Show/hide
Query:  CNKPADHGHSQ-----HQQKHDQQHNH-CFGGHVSDKITGVFKGHHHGQAPLASASAPVHHSANAGYCKPAGSKKKKEHHKNKEGGFFRKIKDVFSDHSS
        C     HGH       H       H H   GGH          GH     P      P   S N G+CK AG  +KK HHKNKEGGF  KIKD FSDH S
Subjt:  CNKPADHGHSQ-----HQQKHDQQHNH-CFGGHVSDKITGVFKGHHHGQAPLASASAPVHHSANAGYCKPAGSKKKKEHHKNKEGGFFRKIKDVFSDHSS

Query:  DSSDSENECHKPHH
        D+SDS+++C +  H
Subjt:  DSSDSENECHKPHH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCTCTGCAATGCAACAAACCAGCTGATCATGGGCACAGCCAGCACCAGCAGAAGCATGACCAACAGCATAACCATTGCTTCGGCGGCCACGTCTCCGACAAGAT
CACAGGCGTCTTCAAAGGCCACCATCATGGCCAGGCTCCACTGGCATCGGCATCGGCACCGGTGCACCACTCTGCCAATGCCGGCTACTGCAAGCCAGCTGGGTCAAAGA
AGAAGAAGGAACACCACAAGAATAAAGAAGGGGGTTTTTTTCGTAAGATCAAGGATGTCTTTTCTGACCACAGCAGTGACAGCAGTGACAGTGAAAATGAATGTCACAAA
CCTCATCACAACAAGAAGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCTCTGCAATGCAACAAACCAGCTGATCATGGGCACAGCCAGCACCAGCAGAAGCATGACCAACAGCATAACCATTGCTTCGGCGGCCACGTCTCCGACAAGAT
CACAGGCGTCTTCAAAGGCCACCATCATGGCCAGGCTCCACTGGCATCGGCATCGGCACCGGTGCACCACTCTGCCAATGCCGGCTACTGCAAGCCAGCTGGGTCAAAGA
AGAAGAAGGAACACCACAAGAATAAAGAAGGGGGTTTTTTTCGTAAGATCAAGGATGTCTTTTCTGACCACAGCAGTGACAGCAGTGACAGTGAAAATGAATGTCACAAA
CCTCATCACAACAAGAAGAATTGA
Protein sequenceShow/hide protein sequence
MASLQCNKPADHGHSQHQQKHDQQHNHCFGGHVSDKITGVFKGHHHGQAPLASASAPVHHSANAGYCKPAGSKKKKEHHKNKEGGFFRKIKDVFSDHSSDSSDSENECHK
PHHNKKN