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HG10009062 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10009062
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionglycine-rich cell wall structural protein 1-like
Genome locationChr06:2135016..2136371
RNA-Seq ExpressionHG10009062
SyntenyHG10009062
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042689.1 uncharacterized protein E6C27_scaffold44G001870 [Cucumis melo var. makuwa]8.5e-1671.43Show/hide
Query:  MASLHCNKPADHGHGRHQQKHDQQH-HHCFGGHVSDKITGVF-KGHHHGQAPPASVWAPEHHFANAAYCK
        MA   C KPADH HG+HQQKHDQQH HHCFGGHVSDKI GVF KGHHH QA PAS     HH AN ++CK
Subjt:  MASLHCNKPADHGHGRHQQKHDQQH-HHCFGGHVSDKITGVF-KGHHHGQAPPASVWAPEHHFANAAYCK

XP_008437383.1 PREDICTED: uncharacterized protein LOC103482815 [Cucumis melo]8.5e-1671.43Show/hide
Query:  MASLHCNKPADHGHGRHQQKHDQQH-HHCFGGHVSDKITGVF-KGHHHGQAPPASVWAPEHHFANAAYCK
        MA   C KPADH HG+HQQKHDQQH HHCFGGHVSDKI GVF KGHHH QA PAS     HH AN ++CK
Subjt:  MASLHCNKPADHGHGRHQQKHDQQH-HHCFGGHVSDKITGVF-KGHHHGQAPPASVWAPEHHFANAAYCK

XP_008437383.1 PREDICTED: uncharacterized protein LOC103482815 [Cucumis melo]1.5e-1263.38Show/hide
Query:  HHHGQDPPASTPVHHSTNAGYCKPAGS-NKKEHHKNREGGFLHQINDVWSDH---SSDSENECHKPHHNKK
        HHH Q  PAS  VHHS N  +CK +GS  KKEH   +EGG LH+I + +SDH   SSDSENECHKPHHNKK
Subjt:  HHHGQDPPASTPVHHSTNAGYCKPAGS-NKKEHHKNREGGFLHQINDVWSDH---SSDSENECHKPHHNKK

XP_008437383.1 PREDICTED: uncharacterized protein LOC103482815 [Cucumis melo]8.6e-0837.5Show/hide
Query:  ISALEPVHHFANVGYWKPAHHHGQAPPASASASVHHFANAGYCKPAHHH-DQAPPASASALVHHSADAGYCKPAHHHDQA-PPASASALVHHSADAGYCK
        +S+    HH A V    P++H   + PA++S   HH   A    P+HHH     PASA A  H     GY  PAHHH  A  P+ A    HH  DA    
Subjt:  ISALEPVHHFANVGYWKPAHHHGQAPPASASASVHHFANAGYCKPAHHH-DQAPPASASALVHHSADAGYCKPAHHHDQA-PPASASALVHHSADAGYCK

Query:  PAHH-HGQAPPASASACTCKPAH--HHGQAPPASASACTCKPAHHHGQDPPASTPVHHSTNAGYCKPAGSNKKEHH
        P+HH H Q  P+ A A    PAH  HH  AP AS         HHH     A  P H   + G+  PA S  + HH
Subjt:  PAHH-HGQAPPASASACTCKPAH--HHGQAPPASASACTCKPAHHHGQDPPASTPVHHSTNAGYCKPAGSNKKEHH

XP_022958513.1 glycine-rich cell wall structural protein 1-like [Cucurbita moschata]2.1e-0632.81Show/hide
Query:  CNKPADHGHGRHQQKHDQQHHHCFGGHVSDKITGVFKGHHHGQAPPASVWAPEHHFANAAYCKPAHHHGQAPPASASAPVDHFANAGY-WNPAYHHGQAP
        C     HGHG          H   GGH      G   GH HG A     W   H  +    C PA  HG  P         H  + G+   PA  HG  P
Subjt:  CNKPADHGHGRHQQKHDQQHHHCFGGHVSDKITGVFKGHHHGQAPPASVWAPEHHFANAAYCKPAHHHGQAPPASASAPVDHFANAGY-WNPAYHHGQAP

Query:  LISALEPVHHFANVGYWKPAHHHGQAPPASASASVHHFANAGYCKPAHHHDQAPPASASALVH-HSADAGY-CKPAHHHDQAPP----ASASALVHHSAD
           A    H  +      PA  HG  P   A    H  +    C PA  H   P     A  H H    G+ C PA  H   P        S    H   
Subjt:  LISALEPVHHFANVGYWKPAHHHGQAPPASASASVHHFANAGYCKPAHHHDQAPPASASALVH-HSADAGY-CKPAHHHDQAPP----ASASALVHHSAD

Query:  AGY-CKPA--HHHGQAPP-----ASASACTCKPAHHHGQAPPASASACTCKPAHHH-GQDPPASTPVHHSTNAGYCKPAGSNKKEHHKNREGGFLHQIND
         G+ C PA  H HG  P        A      PA  HG   PA+ +   C+PA+ + G   PA      S N G+CK  GS KK HHKN+EGGFL++I D
Subjt:  AGY-CKPA--HHHGQAPP-----ASASACTCKPAHHHGQAPPASASACTCKPAHHH-GQDPPASTPVHHSTNAGYCKPAGSNKKEHHKNREGGFLHQIND

Query:  VWSDHS--SDSENECHKPHH
         +SDHS  SDS+++C +  H
Subjt:  VWSDHS--SDSENECHKPHH

XP_038875375.1 uncharacterized protein LOC120067846 [Benincasa hispida]2.0e-1762.64Show/hide
Query:  HHHGQAPPASASACTCKPAHHHGQDPPASTPVHHSTNAGYCKPAGS-NKKEHHKNREGGFLHQINDVWSDH---SSDSENECHKPHHNKKN
        HHH      S         HHHGQ P AS PVHHS NA +CKP GS  KKEHHKN+EGG LH+I D +SDH   SSDSENEC KPHHNKKN
Subjt:  HHHGQAPPASASACTCKPAHHHGQDPPASTPVHHSTNAGYCKPAGS-NKKEHHKNREGGFLHQINDVWSDH---SSDSENECHKPHHNKKN

TrEMBL top hitse value%identityAlignment
A0A1S3AUH3 uncharacterized protein LOC1034828154.1e-1671.43Show/hide
Query:  MASLHCNKPADHGHGRHQQKHDQQH-HHCFGGHVSDKITGVF-KGHHHGQAPPASVWAPEHHFANAAYCK
        MA   C KPADH HG+HQQKHDQQH HHCFGGHVSDKI GVF KGHHH QA PAS     HH AN ++CK
Subjt:  MASLHCNKPADHGHGRHQQKHDQQH-HHCFGGHVSDKITGVF-KGHHHGQAPPASVWAPEHHFANAAYCK

A0A1S3AUH3 uncharacterized protein LOC1034828157.3e-1363.38Show/hide
Query:  HHHGQDPPASTPVHHSTNAGYCKPAGS-NKKEHHKNREGGFLHQINDVWSDH---SSDSENECHKPHHNKK
        HHH Q  PAS  VHHS N  +CK +GS  KKEH   +EGG LH+I + +SDH   SSDSENECHKPHHNKK
Subjt:  HHHGQDPPASTPVHHSTNAGYCKPAGS-NKKEHHKNREGGFLHQINDVWSDH---SSDSENECHKPHHNKK

A0A1S3AUH3 uncharacterized protein LOC1034828154.1e-0837.5Show/hide
Query:  ISALEPVHHFANVGYWKPAHHHGQAPPASASASVHHFANAGYCKPAHHH-DQAPPASASALVHHSADAGYCKPAHHHDQA-PPASASALVHHSADAGYCK
        +S+    HH A V    P++H   + PA++S   HH   A    P+HHH     PASA A  H     GY  PAHHH  A  P+ A    HH  DA    
Subjt:  ISALEPVHHFANVGYWKPAHHHGQAPPASASASVHHFANAGYCKPAHHH-DQAPPASASALVHHSADAGYCKPAHHHDQA-PPASASALVHHSADAGYCK

Query:  PAHH-HGQAPPASASACTCKPAH--HHGQAPPASASACTCKPAHHHGQDPPASTPVHHSTNAGYCKPAGSNKKEHH
        P+HH H Q  P+ A A    PAH  HH  AP AS         HHH     A  P H   + G+  PA S  + HH
Subjt:  PAHH-HGQAPPASASACTCKPAH--HHGQAPPASASACTCKPAHHHGQDPPASTPVHHSTNAGYCKPAGSNKKEHH

A0A5A7TMV4 Uncharacterized protein4.1e-1671.43Show/hide
Query:  MASLHCNKPADHGHGRHQQKHDQQH-HHCFGGHVSDKITGVF-KGHHHGQAPPASVWAPEHHFANAAYCK
        MA   C KPADH HG+HQQKHDQQH HHCFGGHVSDKI GVF KGHHH QA PAS     HH AN ++CK
Subjt:  MASLHCNKPADHGHGRHQQKHDQQH-HHCFGGHVSDKITGVF-KGHHHGQAPPASVWAPEHHFANAAYCK

A0A6J1CWW2 uncharacterized protein LOC1110153151.0e-0652.27Show/hide
Query:  MASLHCNKPADHGHGRHQQKHDQQHHHCFGGHVSDKITGVFKGH-HHGQAPPASVWAPEHHFANAAYCKPAHHHGQAPPASASAPVDH
        MASL C+KPAD  H ++ QKHDQ   HCF GHVSDKI GVFKGH HHGQAP A                 A HH     A+A+A V H
Subjt:  MASLHCNKPADHGHGRHQQKHDQQHHHCFGGHVSDKITGVFKGH-HHGQAPPASVWAPEHHFANAAYCKPAHHHGQAPPASASAPVDH

A0A6J1H399 glycine-rich cell wall structural protein 1-like1.0e-0632.81Show/hide
Query:  CNKPADHGHGRHQQKHDQQHHHCFGGHVSDKITGVFKGHHHGQAPPASVWAPEHHFANAAYCKPAHHHGQAPPASASAPVDHFANAGY-WNPAYHHGQAP
        C     HGHG          H   GGH      G   GH HG A     W   H  +    C PA  HG  P         H  + G+   PA  HG  P
Subjt:  CNKPADHGHGRHQQKHDQQHHHCFGGHVSDKITGVFKGHHHGQAPPASVWAPEHHFANAAYCKPAHHHGQAPPASASAPVDHFANAGY-WNPAYHHGQAP

Query:  LISALEPVHHFANVGYWKPAHHHGQAPPASASASVHHFANAGYCKPAHHHDQAPPASASALVH-HSADAGY-CKPAHHHDQAPP----ASASALVHHSAD
           A    H  +      PA  HG  P   A    H  +    C PA  H   P     A  H H    G+ C PA  H   P        S    H   
Subjt:  LISALEPVHHFANVGYWKPAHHHGQAPPASASASVHHFANAGYCKPAHHHDQAPPASASALVH-HSADAGY-CKPAHHHDQAPP----ASASALVHHSAD

Query:  AGY-CKPA--HHHGQAPP-----ASASACTCKPAHHHGQAPPASASACTCKPAHHH-GQDPPASTPVHHSTNAGYCKPAGSNKKEHHKNREGGFLHQIND
         G+ C PA  H HG  P        A      PA  HG   PA+ +   C+PA+ + G   PA      S N G+CK  GS KK HHKN+EGGFL++I D
Subjt:  AGY-CKPA--HHHGQAPP-----ASASACTCKPAHHHGQAPPASASACTCKPAHHH-GQDPPASTPVHHSTNAGYCKPAGSNKKEHHKNREGGFLHQIND

Query:  VWSDHS--SDSENECHKPHH
         +SDHS  SDS+++C +  H
Subjt:  VWSDHS--SDSENECHKPHH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCTCTGCATTGCAACAAACCAGCTGATCATGGGCACGGCCGGCACCAGCAGAAGCATGACCAACAGCATCACCATTGCTTCGGCGGCCACGTCTCTGACAAGAT
CACAGGCGTCTTCAAAGGCCACCATCATGGCCAGGCTCCACCAGCATCAGTATGGGCGCCGGAGCACCACTTTGCCAATGCCGCCTACTGCAAGCCAGCCCACCATCATG
GCCAGGCTCCACCGGCATCGGCATCGGCGCCGGTGGACCACTTTGCCAATGCCGGCTACTGGAACCCAGCCTACCATCATGGCCAGGCTCCACTGATATCGGCATTGGAG
CCGGTGCACCACTTTGCCAATGTCGGCTACTGGAAGCCAGCCCACCATCATGGCCAGGCTCCACCGGCATCGGCATCGGCGTCGGTGCACCACTTTGCCAATGCCGGCTA
CTGCAAGCCAGCCCACCATCATGACCAGGCTCCACCGGCATCGGCATCGGCGCTAGTGCACCACTCTGCCGATGCCGGCTACTGCAAGCCAGCCCACCATCATGACCAGG
CTCCACCGGCATCGGCATCGGCGCTAGTGCACCACTCTGCCGATGCCGGCTACTGCAAGCCGGCCCACCATCATGGCCAGGCTCCACCGGCATCAGCATCGGCGTGCACC
TGCAAGCCAGCCCACCATCATGGCCAGGCTCCACCGGCATCAGCATCGGCGTGCACCTGCAAACCAGCCCACCATCATGGCCAGGATCCACCGGCATCGACGCCGGTGCA
CCACTCTACCAATGCCGGCTACTGCAAGCCAGCTGGGTCAAATAAGAAGGAACACCACAAGAATAGAGAAGGGGGTTTTCTTCATCAGATCAATGATGTCTGGTCTGACC
ACAGCAGTGATAGTGAAAATGAATGTCACAAACCCCATCACAACAAGAAGAACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCTCTGCATTGCAACAAACCAGCTGATCATGGGCACGGCCGGCACCAGCAGAAGCATGACCAACAGCATCACCATTGCTTCGGCGGCCACGTCTCTGACAAGAT
CACAGGCGTCTTCAAAGGCCACCATCATGGCCAGGCTCCACCAGCATCAGTATGGGCGCCGGAGCACCACTTTGCCAATGCCGCCTACTGCAAGCCAGCCCACCATCATG
GCCAGGCTCCACCGGCATCGGCATCGGCGCCGGTGGACCACTTTGCCAATGCCGGCTACTGGAACCCAGCCTACCATCATGGCCAGGCTCCACTGATATCGGCATTGGAG
CCGGTGCACCACTTTGCCAATGTCGGCTACTGGAAGCCAGCCCACCATCATGGCCAGGCTCCACCGGCATCGGCATCGGCGTCGGTGCACCACTTTGCCAATGCCGGCTA
CTGCAAGCCAGCCCACCATCATGACCAGGCTCCACCGGCATCGGCATCGGCGCTAGTGCACCACTCTGCCGATGCCGGCTACTGCAAGCCAGCCCACCATCATGACCAGG
CTCCACCGGCATCGGCATCGGCGCTAGTGCACCACTCTGCCGATGCCGGCTACTGCAAGCCGGCCCACCATCATGGCCAGGCTCCACCGGCATCAGCATCGGCGTGCACC
TGCAAGCCAGCCCACCATCATGGCCAGGCTCCACCGGCATCAGCATCGGCGTGCACCTGCAAACCAGCCCACCATCATGGCCAGGATCCACCGGCATCGACGCCGGTGCA
CCACTCTACCAATGCCGGCTACTGCAAGCCAGCTGGGTCAAATAAGAAGGAACACCACAAGAATAGAGAAGGGGGTTTTCTTCATCAGATCAATGATGTCTGGTCTGACC
ACAGCAGTGATAGTGAAAATGAATGTCACAAACCCCATCACAACAAGAAGAACTGA
Protein sequenceShow/hide protein sequence
MASLHCNKPADHGHGRHQQKHDQQHHHCFGGHVSDKITGVFKGHHHGQAPPASVWAPEHHFANAAYCKPAHHHGQAPPASASAPVDHFANAGYWNPAYHHGQAPLISALE
PVHHFANVGYWKPAHHHGQAPPASASASVHHFANAGYCKPAHHHDQAPPASASALVHHSADAGYCKPAHHHDQAPPASASALVHHSADAGYCKPAHHHGQAPPASASACT
CKPAHHHGQAPPASASACTCKPAHHHGQDPPASTPVHHSTNAGYCKPAGSNKKEHHKNREGGFLHQINDVWSDHSSDSENECHKPHHNKKN