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HG10009063 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10009063
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionMyb-like transcription factor tcl2
Genome locationChr06:2139951..2140416
RNA-Seq ExpressionHG10009063
SyntenyHG10009063
Gene Ontology termsGO:0030154 - cell differentiation (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR009057 - Homeobox-like domain superfamily
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_007040481.1 PREDICTED: transcription factor TRY isoform X1 [Theobroma cacao]1.6e-1970Show/hide
Query:  KQPRKQFKRRKSNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIGIERFWILKHG
        ++P+KQ K  KS SEEV+S+EWE I+++EQEEDL++R++RLVGDRWDLIAGRIPGRTA  IERFWI++HG
Subjt:  KQPRKQFKRRKSNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIGIERFWILKHG

XP_022146038.1 transcription factor CPC-like isoform X2 [Momordica charantia]1.8e-2681.25Show/hide
Query:  METEAKKNAKQPRKQFKRRKSNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIGIERFWILKHGS
        ME EAKK  KQP+KQ K R S+SEEVTSLEW++IQISEQEEDLI RMH+LVGDRWDLIAGRIPGRTA+ IERFWILKH S
Subjt:  METEAKKNAKQPRKQFKRRKSNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIGIERFWILKHGS

XP_038680402.1 transcription factor CPC-like [Tripterygium wilfordii]8.6e-2172.86Show/hide
Query:  KQPRKQFKRRKSNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIGIERFWILKHG
        K+PRKQ K R + SEEV+S+EWE I+++EQEEDLI+RMHRLVGD+WDLIAGRIPGR A  IERFWI++HG
Subjt:  KQPRKQFKRRKSNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIGIERFWILKHG

XP_038725413.1 transcription factor CPC-like [Tripterygium wilfordii]4.3e-2070Show/hide
Query:  KQPRKQFKRRKSNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIGIERFWILKHG
        K+PRKQ K R +NSEEV+S+EWE ++++EQEEDLI+RM+RLVGD+WDLIAGRIPGR    IERFWI++HG
Subjt:  KQPRKQFKRRKSNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIGIERFWILKHG

XP_038874276.1 transcription factor CPC-like [Benincasa hispida]6.4e-3291.25Show/hide
Query:  METEAKKNAKQPRKQFKRRKSNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIGIERFWILKHGS
        ME EAKK AKQP+KQ KRRKSNSEEVTSLEWEVIQIS+QEEDLIHRMHRLVGDRWDLIAGRIPGRTA+ IERFWILKHGS
Subjt:  METEAKKNAKQPRKQFKRRKSNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIGIERFWILKHGS

TrEMBL top hitse value%identityAlignment
A0A061G715 Homeodomain-like superfamily protein7.9e-2070Show/hide
Query:  KQPRKQFKRRKSNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIGIERFWILKHG
        ++P+KQ K  KS SEEV+S+EWE I+++EQEEDL++R++RLVGDRWDLIAGRIPGRTA  IERFWI++HG
Subjt:  KQPRKQFKRRKSNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIGIERFWILKHG

A0A2G5CTG8 SANT domain-containing protein3.0e-1971.43Show/hide
Query:  KQPRKQFKRRKSNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIGIERFWILKHG
        K+ RKQ K  K   EEV+S+EWE IQ+S+QEEDLI+RMH+LVGDRWDLIAGRIPGR    IERFWI+KHG
Subjt:  KQPRKQFKRRKSNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIGIERFWILKHG

A0A4V6A0D9 Transcription factor TRY-like3.9e-1972.46Show/hide
Query:  KQPRKQFKRRKSNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIGIERFWILKH
        ++ RKQ K   S SEEV+S+EWE I +SEQEEDLIHRM+RLVG+RWDLIAGRIPGR A  IERFWI+KH
Subjt:  KQPRKQFKRRKSNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIGIERFWILKH

A0A6J1CXI2 transcription factor CPC-like isoform X28.7e-2781.25Show/hide
Query:  METEAKKNAKQPRKQFKRRKSNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIGIERFWILKHGS
        ME EAKK  KQP+KQ K R S+SEEVTSLEW++IQISEQEEDLI RMH+LVGDRWDLIAGRIPGRTA+ IERFWILKH S
Subjt:  METEAKKNAKQPRKQFKRRKSNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIGIERFWILKHGS

B9N984 SANT domain-containing protein2.3e-1971.83Show/hide
Query:  NAKQPRKQFKRRKSNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIGIERFWILKH
        N ++ RKQ K   S SEEV+S+EWE I +SEQEEDLI+RMHRLVG+RWDLIAGRIPGR A  IERFWI+KH
Subjt:  NAKQPRKQFKRRKSNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIGIERFWILKH

SwissProt top hitse value%identityAlignment
O22059 Transcription factor CPC2.0e-2061.84Show/hide
Query:  EAKKNAKQPRKQFKRRKSNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIGIERFWILKHG
        +A+K  K+ R+Q K + S SEEV+S+EWE +++SE+EEDLI RM++LVGDRW+LIAGRIPGRT   IER+W++KHG
Subjt:  EAKKNAKQPRKQFKRRKSNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIGIERFWILKHG

Q84RD1 MYB-like transcription factor ETC26.0e-1762.5Show/hide
Query:  QFKRRKSNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIGIERFWILKH
        +F R + +SEEV+S+EWE I ++EQEEDLI RM+RLVG+RWDLIAGR+ GR A  IER+WI+++
Subjt:  QFKRRKSNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIGIERFWILKH

Q8GV05 Transcription factor TRY7.1e-1862.32Show/hide
Query:  KQPRKQFKRRKSNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIGIERFWILKH
        ++ RKQ K    +SEEV+S+EWE I ++EQEEDLI RM+RLVGDRWDLIAGR+PGR    IER+WI+++
Subjt:  KQPRKQFKRRKSNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIGIERFWILKH

Q9LNI5 MYB-like transcription factor ETC17.1e-1870.69Show/hide
Query:  SNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIGIERFWILKH
        S+SEEV+SLEWE I ++++EEDLI RM++LVG+RWDLIAGRIPGRTA  IERFW++K+
Subjt:  SNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIGIERFWILKH

Q9M157 MYB-like transcription factor ETC31.1e-1863.89Show/hide
Query:  KNAKQPRKQFKRRKSNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIGIERFWILKH
        +  KQP K      S+SEEV+SLEWEV+ +S++EEDL+ RMH+LVGDRW+LIAGRIPGRTA  IERFW++K+
Subjt:  KNAKQPRKQFKRRKSNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIGIERFWILKH

Arabidopsis top hitse value%identityAlignment
AT1G01380.1 Homeodomain-like superfamily protein5.0e-1970.69Show/hide
Query:  SNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIGIERFWILKH
        S+SEEV+SLEWE I ++++EEDLI RM++LVG+RWDLIAGRIPGRTA  IERFW++K+
Subjt:  SNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIGIERFWILKH

AT2G46410.1 Homeodomain-like superfamily protein1.4e-2161.84Show/hide
Query:  EAKKNAKQPRKQFKRRKSNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIGIERFWILKHG
        +A+K  K+ R+Q K + S SEEV+S+EWE +++SE+EEDLI RM++LVGDRW+LIAGRIPGRT   IER+W++KHG
Subjt:  EAKKNAKQPRKQFKRRKSNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIGIERFWILKHG

AT4G01060.1 CAPRICE-like MYB36.6e-1958.9Show/hide
Query:  KNAKQPR-KQFKRRKSNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIGIERFWILKH
        +  KQP+        S   EV+SLEWEV+ +S++EEDL+ RMH+LVGDRW+LIAGRIPGRTA  IERFW++K+
Subjt:  KNAKQPR-KQFKRRKSNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIGIERFWILKH

AT4G01060.3 CAPRICE-like MYB37.8e-2063.89Show/hide
Query:  KNAKQPRKQFKRRKSNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIGIERFWILKH
        +  KQP K      S+SEEV+SLEWEV+ +S++EEDL+ RMH+LVGDRW+LIAGRIPGRTA  IERFW++K+
Subjt:  KNAKQPRKQFKRRKSNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIGIERFWILKH

AT5G53200.1 Homeodomain-like superfamily protein5.0e-1962.32Show/hide
Query:  KQPRKQFKRRKSNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIGIERFWILKH
        ++ RKQ K    +SEEV+S+EWE I ++EQEEDLI RM+RLVGDRWDLIAGR+PGR    IER+WI+++
Subjt:  KQPRKQFKRRKSNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIGIERFWILKH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACCGAAGCTAAGAAGAATGCGAAACAGCCACGGAAACAGTTCAAGAGAAGGAAATCGAACTCGGAAGAAGTTACCAGTTTGGAATGGGAGGTCATTCAAATCAG
TGAGCAGGAGGAGGATCTCATTCATAGAATGCACCGGCTTGTTGGAGACAGGTGGGATTTGATCGCGGGACGAATTCCAGGACGGACTGCAATAGGAATAGAGAGGTTTT
GGATATTGAAGCATGGTTCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAACCGAAGCTAAGAAGAATGCGAAACAGCCACGGAAACAGTTCAAGAGAAGGAAATCGAACTCGGAAGAAGTTACCAGTTTGGAATGGGAGGTCATTCAAATCAG
TGAGCAGGAGGAGGATCTCATTCATAGAATGCACCGGCTTGTTGGAGACAGGTGGGATTTGATCGCGGGACGAATTCCAGGACGGACTGCAATAGGAATAGAGAGGTTTT
GGATATTGAAGCATGGTTCCTGA
Protein sequenceShow/hide protein sequence
METEAKKNAKQPRKQFKRRKSNSEEVTSLEWEVIQISEQEEDLIHRMHRLVGDRWDLIAGRIPGRTAIGIERFWILKHGS