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HG10009071 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10009071
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionNucleotide-sugar transporter
Genome locationChr06:2200005..2200265
RNA-Seq ExpressionHG10009071
SyntenyHG10009071
Gene Ontology termsGO:0008643 - carbohydrate transport (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042696.1 hypothetical protein E6C27_scaffold44G001940 [Cucumis melo var. makuwa]3.9e-3585.19Show/hide
Query:  SCIDVARCSVIGSEHQQRSSKPFDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEMY
        SC D ARCS+IGSEHQQRSSK  DQFQMPLHYPRYKRSDYE MPEWKLDCLLKEYGLP+ GD+A KRKFA+GAFLWP EMY
Subjt:  SCIDVARCSVIGSEHQQRSSKPFDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEMY

KAE8647840.1 hypothetical protein Csa_000107 [Cucumis sativus]3.9e-3586.25Show/hide
Query:  SCIDVARCSVIGSEHQQRSSKPFDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEM
        SC D ARCS+IGSEHQQRSSK FDQFQMPLHYPRY+RSDYEGMPEWKLDCLLKEYGLPV GD+A KRKFA+GAFLWP E+
Subjt:  SCIDVARCSVIGSEHQQRSSKPFDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEM

KAG6606051.1 hypothetical protein SDJN03_03368, partial [Cucurbita argyrosperma subsp. sororia]1.7e-3073.63Show/hide
Query:  MSGITSCIDVARCSVIGSEHQQRS-----SKPFDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEMY
        MS I S +  ARC+VIG+E  Q+      SK FD FQMPLHYP+YKRSDYEGM EWKLDCLLKEYGLPVAGD+A KRKFA+GAFLWPSEMY
Subjt:  MSGITSCIDVARCSVIGSEHQQRS-----SKPFDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEMY

KAG7035999.1 hypothetical protein SDJN02_02799, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-3072.04Show/hide
Query:  MSGITSCIDVARCSVIGSEHQQRS-------SKPFDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEMY
        MS I S +  ARC+VIG+E  Q+        SK FD FQMPLHYP+YKRSDYEGM EWKLDCLLKEYGLPVAGD+A KRKFA+GAFLWPSEMY
Subjt:  MSGITSCIDVARCSVIGSEHQQRS-------SKPFDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEMY

XP_022958391.1 uncharacterized protein LOC111459627 [Cucurbita moschata]2.0e-3173.91Show/hide
Query:  MSGITSCIDVARCSVIGSEHQQRS------SKPFDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEMY
        MS I S +D ARC+VIG+E  Q+       SK FD FQMPLHYP+YKRSDYEGM EWKLDCLLKEYGLPVAGD+A KRKFA+GAFLWPSEMY
Subjt:  MSGITSCIDVARCSVIGSEHQQRS------SKPFDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEMY

TrEMBL top hitse value%identityAlignment
A0A0A0KMG0 Uncharacterized protein8.1e-3987.21Show/hide
Query:  MSGITSCIDVARCSVIGSEHQQRSSKPFDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEMY
        MSGI SC D ARCS+IGSEHQQRSSK FDQFQMPLHYPRY+RSDYEGMPEWKLDCLLKEYGLPV GD+A KRKFA+GAFLWP EMY
Subjt:  MSGITSCIDVARCSVIGSEHQQRSSKPFDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEMY

A0A5D3C447 Uncharacterized protein1.9e-3585.19Show/hide
Query:  SCIDVARCSVIGSEHQQRSSKPFDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEMY
        SC D ARCS+IGSEHQQRSSK  DQFQMPLHYPRYKRSDYE MPEWKLDCLLKEYGLP+ GD+A KRKFA+GAFLWP EMY
Subjt:  SCIDVARCSVIGSEHQQRSSKPFDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEMY

A0A6J1CXF4 uncharacterized protein LOC1110153217.9e-2677.94Show/hide
Query:  EHQQRSSKPFDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEMY
        + QQR SK F QFQMPLHYPRYK+SDYE MPEWKLDCLLKEYGLP+ GD+A KRKFA+GAFLWP + Y
Subjt:  EHQQRSSKPFDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEMY

A0A6J1H1Y5 uncharacterized protein LOC1114596279.6e-3273.91Show/hide
Query:  MSGITSCIDVARCSVIGSEHQQRS------SKPFDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEMY
        MS I S +D ARC+VIG+E  Q+       SK FD FQMPLHYP+YKRSDYEGM EWKLDCLLKEYGLPVAGD+A KRKFA+GAFLWPSEMY
Subjt:  MSGITSCIDVARCSVIGSEHQQRS------SKPFDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEMY

A0A7J7GD32 Uncharacterized protein3.1e-2273.85Show/hide
Query:  HQQRSSKPFDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSE
        HQQ+  K    FQMPLHYPRYK+SDYE MPEWKLDCLL +YGL V+GDI+HKR FA+GAFLWPS+
Subjt:  HQQRSSKPFDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09950.1 unknown protein2.6e-1356.9Show/hide
Query:  PFDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGD--IAHKRKFAIGAFLWP
        P   F+MPLHYPRY + DYE M EW+LD LL EYGL    D  +  KR FAI  F+WP
Subjt:  PFDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGD--IAHKRKFAIGAFLWP

AT3G11405.1 unknown protein7.1e-1154.24Show/hide
Query:  SSKPFDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPV-AGDIAHKRKFAIGAFLW
        SS P   FQMPL YP Y +  Y+ M E +LD LLK YGLP   G+++ K++FA+GAFLW
Subjt:  SSKPFDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPV-AGDIAHKRKFAIGAFLW

AT3G55570.1 unknown protein2.7e-1869.81Show/hide
Query:  FQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPS
        F+MPLHYPRY + DY+ MPEWKLD +L +YGL   GD+AHKR FAIGAFLW S
Subjt:  FQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPS

AT5G41761.1 unknown protein3.8e-2070.97Show/hide
Query:  KPFDQ---FQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSE
        KP +Q   FQ+PLHYP+Y +SDYE MPEW+LD LL+EYGLPV GD   KRKFAIGAFLW SE
Subjt:  KPFDQ---FQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSE

AT5G55620.1 unknown protein9.0e-1454.55Show/hide
Query:  FQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEM
        FQ+PLHYP+Y +SDYE M + +LD LLK+YG    G +  KR FAI +FLWP ++
Subjt:  FQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGGAATAACGAGCTGCATCGATGTTGCTCGGTGCTCTGTGATCGGGTCGGAGCATCAGCAGCGATCGAGCAAACCGTTCGATCAGTTTCAAATGCCTCTTCACTA
CCCAAGGTACAAGAGGAGTGACTATGAGGGCATGCCAGAGTGGAAACTGGACTGCCTTCTTAAAGAATATGGTCTACCGGTTGCCGGAGACATCGCCCACAAGCGAAAGT
TCGCCATCGGAGCTTTCCTTTGGCCTTCTGAAATGTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCGGAATAACGAGCTGCATCGATGTTGCTCGGTGCTCTGTGATCGGGTCGGAGCATCAGCAGCGATCGAGCAAACCGTTCGATCAGTTTCAAATGCCTCTTCACTA
CCCAAGGTACAAGAGGAGTGACTATGAGGGCATGCCAGAGTGGAAACTGGACTGCCTTCTTAAAGAATATGGTCTACCGGTTGCCGGAGACATCGCCCACAAGCGAAAGT
TCGCCATCGGAGCTTTCCTTTGGCCTTCTGAAATGTACTGA
Protein sequenceShow/hide protein sequence
MSGITSCIDVARCSVIGSEHQQRSSKPFDQFQMPLHYPRYKRSDYEGMPEWKLDCLLKEYGLPVAGDIAHKRKFAIGAFLWPSEMY