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HG10009127 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10009127
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationChr06:2768337..2768755
RNA-Seq ExpressionHG10009127
SyntenyHG10009127
Gene Ontology termsGO:0043457 - regulation of cellular respiration (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAD07869.1 hypothetical protein [Oryza sativa Japonica Group]4.4e-1470.59Show/hide
Query:  ARSAAEDASPDYNSDVEDARFSSWALPGSLAVTRGILRVVPPDLGSRRERRPLGDGVQRVGVGVHKEA
        ARS AEDASPDYNSD   ARFSSWA PGSLAVTRGILRVVPPDLGSR E   LG   +R  + V  +A
Subjt:  ARSAAEDASPDYNSDVEDARFSSWALPGSLAVTRGILRVVPPDLGSRRERRPLGDGVQRVGVGVHKEA

KAG4975684.1 hypothetical protein JHK86_035158 [Glycine max]1.6e-1180Show/hide
Query:  ARSAAEDASPDYNSDVEDARFSSWALPGSLAVTRGILRVVPPDLGSRRER
        ARSA EDASPDYNSD E  RFS WA PGSLAVT+GILRV PPDL SR ER
Subjt:  ARSAAEDASPDYNSDVEDARFSSWALPGSLAVTRGILRVVPPDLGSRRER

KEH17348.1 hypothetical protein MTR_0021s0160 [Medicago truncatula]2.0e-1484.91Show/hide
Query:  ARSAAEDASPDYNSDVEDARFSSWALPGSLAVTRGILRVVPPDLGSRRERRPL
        ARS AEDASPDYNSD   ARFSSWA+PGSLAVTRGILRVVPPDLGSR +RR L
Subjt:  ARSAAEDASPDYNSDVEDARFSSWALPGSLAVTRGILRVVPPDLGSRRERRPL

QCE14242.1 hypothetical protein DEO72_LG11g1241 [Vigna unguiculata]1.3e-1383.02Show/hide
Query:  ARSAAEDASPDYNSDVEDARFSSWALPGSLAVTRGILRVVPPDLGSRRERRPL
        ARS AEDASPDYNS+   ARFSSWA PGSLAVTRGILRVVPPDLGSR +RR L
Subjt:  ARSAAEDASPDYNSDVEDARFSSWALPGSLAVTRGILRVVPPDLGSRRERRPL

TKR97773.1 hypothetical protein D5086_0000209730 [Populus alba]1.7e-1387.76Show/hide
Query:  ARSAAEDASPDYNSDVEDARFSSWALPGSLAVTRGILRVVPPDLGSRRE
        A SAAEDASPDYNSD   ARFSSWA PGSLAVTRGILRVVPPDLGS+RE
Subjt:  ARSAAEDASPDYNSDVEDARFSSWALPGSLAVTRGILRVVPPDLGSRRE

TrEMBL top hitse value%identityAlignment
A0A072TKH6 Uncharacterized protein9.6e-1584.91Show/hide
Query:  ARSAAEDASPDYNSDVEDARFSSWALPGSLAVTRGILRVVPPDLGSRRERRPL
        ARS AEDASPDYNSD   ARFSSWA+PGSLAVTRGILRVVPPDLGSR +RR L
Subjt:  ARSAAEDASPDYNSDVEDARFSSWALPGSLAVTRGILRVVPPDLGSRRERRPL

A0A4D6NMM4 Uncharacterized protein6.2e-1483.02Show/hide
Query:  ARSAAEDASPDYNSDVEDARFSSWALPGSLAVTRGILRVVPPDLGSRRERRPL
        ARS AEDASPDYNS+   ARFSSWA PGSLAVTRGILRVVPPDLGSR +RR L
Subjt:  ARSAAEDASPDYNSDVEDARFSSWALPGSLAVTRGILRVVPPDLGSRRERRPL

A0A4U5PME5 Uncharacterized protein8.1e-1487.76Show/hide
Query:  ARSAAEDASPDYNSDVEDARFSSWALPGSLAVTRGILRVVPPDLGSRRE
        A SAAEDASPDYNSD   ARFSSWA PGSLAVTRGILRVVPPDLGS+RE
Subjt:  ARSAAEDASPDYNSDVEDARFSSWALPGSLAVTRGILRVVPPDLGSRRE

A0A6N2KJE8 Uncharacterized protein3.1e-1385.71Show/hide
Query:  ARSAAEDASPDYNSDVEDARFSSWALPGSLAVTRGILRVVPPDLGSRRE
        A SAAEDASPDYNS+   ARFSSWA PGSLAVTRGILRVVPPDLGS+RE
Subjt:  ARSAAEDASPDYNSDVEDARFSSWALPGSLAVTRGILRVVPPDLGSRRE

Q6Z8F0 Uncharacterized protein P0459B01.182.1e-1470.59Show/hide
Query:  ARSAAEDASPDYNSDVEDARFSSWALPGSLAVTRGILRVVPPDLGSRRERRPLGDGVQRVGVGVHKEA
        ARS AEDASPDYNSD   ARFSSWA PGSLAVTRGILRVVPPDLGSR E   LG   +R  + V  +A
Subjt:  ARSAAEDASPDYNSDVEDARFSSWALPGSLAVTRGILRVVPPDLGSRRERRPLGDGVQRVGVGVHKEA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACTGATGTATTCAACGAGTCTATAGCCTTGGCCGACAGGCCCGGTAAGCGCGAGTCATCAGCTCGGTCCGCCGCTGAGGACGCTTCTCCAGACTACAATTCGGA
CGTCGAGGACGCCCGATTCTCAAGCTGGGCTCTTCCCGGTTCGCTCGCCGTTACTAGGGGAATCCTTCGGGTAGTCCCGCCTGACCTGGGGTCGCGTCGAGAGCGTCGTC
CTTTGGGAGACGGCGTTCAGAGGGTCGGTGTAGGAGTCCACAAGGAGGCGGCGTCAAATTCGCTGCGAAGCAAAAAAAAAAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTACTGATGTATTCAACGAGTCTATAGCCTTGGCCGACAGGCCCGGTAAGCGCGAGTCATCAGCTCGGTCCGCCGCTGAGGACGCTTCTCCAGACTACAATTCGGA
CGTCGAGGACGCCCGATTCTCAAGCTGGGCTCTTCCCGGTTCGCTCGCCGTTACTAGGGGAATCCTTCGGGTAGTCCCGCCTGACCTGGGGTCGCGTCGAGAGCGTCGTC
CTTTGGGAGACGGCGTTCAGAGGGTCGGTGTAGGAGTCCACAAGGAGGCGGCGTCAAATTCGCTGCGAAGCAAAAAAAAAAGGTAA
Protein sequenceShow/hide protein sequence
MATDVFNESIALADRPGKRESSARSAAEDASPDYNSDVEDARFSSWALPGSLAVTRGILRVVPPDLGSRRERRPLGDGVQRVGVGVHKEAASNSLRSKKKR