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HG10009207 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10009207
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionNAC domain-containing protein
Genome locationChr06:3540527..3540880
RNA-Seq ExpressionHG10009207
SyntenyHG10009207
Gene Ontology termsGO:0009772 - photosynthetic electron transport in photosystem II (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009523 - photosystem II (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0042170 - plastid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0045156 - electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AES88885.1 hypothetical protein MTR_4g064360 [Medicago truncatula]2.4e-1190.48Show/hide
Query:  GEFSAMGESLTEQCRVEVEGLRVVNFFSRRRNNDGIWGISIG
        GEFSAMGESLTEQCRVEV+GLRV+NFFS RRNNDGI GISIG
Subjt:  GEFSAMGESLTEQCRVEVEGLRVVNFFSRRRNNDGIWGISIG
RYQ84273.1 hypothetical protein Ahy_B10g103409 [Arachis hypogaea]1.3e-1288.89Show/hide
Query:  DSSGEFSAMGESLTEQCRVEVEGLRVVNFFSRRRNNDGIWGISIG
        D SG+FSAMG+SLTEQCRVEVEGLRVVNFFSRRR+NDGI GISIG
Subjt:  DSSGEFSAMGESLTEQCRVEVEGLRVVNFFSRRRNNDGIWGISIG
RYR46409.1 hypothetical protein Ahy_A07g032147 [Arachis hypogaea]4.1e-1197.3Show/hide
Query:  MGESLTEQCRVEVEGLRVVNFFSRRRNNDGIWGISIG
        MGESLTEQCRVEVEGLRVVNFFSRRR+NDGIWGISIG
Subjt:  MGESLTEQCRVEVEGLRVVNFFSRRRNNDGIWGISIG
RYR73951.1 hypothetical protein Ahy_A02g008534 [Arachis hypogaea]6.9e-1190.48Show/hide
Query:  GEFSAMGESLTEQCRVEVEGLRVVNFFSRRRNNDGIWGISIG
        GEFSAMGESL EQCRVEVEGLRVVNFFS RR+NDGI GISIG
Subjt:  GEFSAMGESLTEQCRVEVEGLRVVNFFSRRRNNDGIWGISIG
XP_040944804.1 LOW QUALITY PROTEIN: uncharacterized protein LOC107907897 [Gossypium hirsutum]5.1e-1493.33Show/hide
Query:  GDSSGEFSAMGESLTEQCRVEVEGLRVVNFFSRRRNNDGIWGISI
        G SSGEFSAMGESLTEQCRVEVEG RVVNFFSRRR+NDGIWGISI
Subjt:  GDSSGEFSAMGESLTEQCRVEVEGLRVVNFFSRRRNNDGIWGISI
TrEMBL top hitse value%identityAlignment
A0A444X3T4 Uncharacterized protein6.1e-1388.89Show/hide
Query:  DSSGEFSAMGESLTEQCRVEVEGLRVVNFFSRRRNNDGIWGISIG
        D SG+FSAMG+SLTEQCRVEVEGLRVVNFFSRRR+NDGI GISIG
Subjt:  DSSGEFSAMGESLTEQCRVEVEGLRVVNFFSRRRNNDGIWGISIG
A0A445C671 Uncharacterized protein2.0e-1197.3Show/hide
Query:  MGESLTEQCRVEVEGLRVVNFFSRRRNNDGIWGISIG
        MGESLTEQCRVEVEGLRVVNFFSRRR+NDGIWGISIG
Subjt:  MGESLTEQCRVEVEGLRVVNFFSRRRNNDGIWGISIG
A0A445EEV4 Uncharacterized protein3.4e-1190.48Show/hide
Query:  GEFSAMGESLTEQCRVEVEGLRVVNFFSRRRNNDGIWGISIG
        GEFSAMGESL EQCRVEVEGLRVVNFFS RR+NDGI GISIG
Subjt:  GEFSAMGESLTEQCRVEVEGLRVVNFFSRRRNNDGIWGISIG
A0A6N2KHV9 Uncharacterized protein ycf683.7e-1092.11Show/hide
Query:  GDSSGEFSAMGESLTEQCRVEVEGLRVVNFFSRRRNND
        G SSGEFSAMGESLTEQCRVEVEGLRVVNFFS+RR+ND
Subjt:  GDSSGEFSAMGESLTEQCRVEVEGLRVVNFFSRRRNND
G7JUV5 Uncharacterized protein1.2e-1190.48Show/hide
Query:  GEFSAMGESLTEQCRVEVEGLRVVNFFSRRRNNDGIWGISIG
        GEFSAMGESLTEQCRVEV+GLRV+NFFS RRNNDGI GISIG
Subjt:  GEFSAMGESLTEQCRVEVEGLRVVNFFSRRRNNDGIWGISIG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGACTCGAAGGCAGAGATGACTTTCCTACTGACGGAATCGCTTGAATTAGTTGAAGGAAAGGAGGTGGCTGGTCTCACTGGAGAGGAGAGTAAGCCGGGAATGAG
TACCTATCCCTTACGGGAATCGAACCCGTGTCTTCGACATGAAAAGACGCTCGACTATACCATATTGAGCTTTCCTCCCGACATTGGAATATGGATTGGGAAGGGCGACA
GCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTAGAAGGCCTACGGGTCGTGAACTTCTTTTCCCGGAGAAGAAACAATGACGGT
ATCTGGGGAATAAGCATCGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGATAGACTCGAAGGCAGAGATGACTTTCCTACTGACGGAATCGCTTGAATTAGTTGAAGGAAAGGAGGTGGCTGGTCTCACTGGAGAGGAGAGTAAGCCGGGAATGAG
TACCTATCCCTTACGGGAATCGAACCCGTGTCTTCGACATGAAAAGACGCTCGACTATACCATATTGAGCTTTCCTCCCGACATTGGAATATGGATTGGGAAGGGCGACA
GCAGTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGTAGAAGGCCTACGGGTCGTGAACTTCTTTTCCCGGAGAAGAAACAATGACGGT
ATCTGGGGAATAAGCATCGGCTAA
Protein sequenceShow/hide protein sequence
MIDSKAEMTFLLTESLELVEGKEVAGLTGEESKPGMSTYPLRESNPCLRHEKTLDYTILSFPPDIGIWIGKGDSSGEFSAMGESLTEQCRVEVEGLRVVNFFSRRRNNDG
IWGISIG