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HG10009238 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10009238
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionprotein LITTLE ZIPPER 2-like
Genome locationChr06:3803149..3803510
RNA-Seq ExpressionHG10009238
SyntenyHG10009238
Gene Ontology termsNA
InterPro domainsIPR039312 - Protein LITTLE ZIPPER


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647881.1 hypothetical protein Csa_000025 [Cucumis sativus]4.2e-3893.81Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLT-RRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK
        MC+SATQSVLFHTIQSSKNRRS KRS  QVLRLT RRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLAL+TEFQKKFPHLEQRK
Subjt:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLT-RRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK

KAG6579456.1 Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. sororia]3.0e-3687.5Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK
        MCI ATQS+LFH IQ+SKN+R  KRSKLQVLRLTRRRCEEKLGKDIELKNLQLYL+NQTII+EN+KLREKANILHQEN+ALMTEFQKKFPHL QRK
Subjt:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK

KAG7036101.1 Protein LITTLE ZIPPER 2, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-3182.65Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLT--RRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK
        MCI+ATQ +LFH I +SKNRR LKRSKLQV RL+  RR  EEK GKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEF KKFPH +QRK
Subjt:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLT--RRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK

XP_022922429.1 protein LITTLE ZIPPER 1-like [Cucurbita moschata]3.5e-3789.58Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK
        MCISATQS+LFH IQ+SKNRR  KRSKLQVLRLTRRRCEEKLGKDIELKNLQLYL+NQTII+EN+KLREKANILHQEN+ALMTEFQKKFPHL QRK
Subjt:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK

XP_023534553.1 protein LITTLE ZIPPER 2-like [Cucurbita pepo subsp. pepo]1.2e-3284.54Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLTRRRC-EEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK
        MCI+ATQ +LFH I +SKNRR LKRSKLQV RL+RRR  EEK GKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEF KKFPH +QRK
Subjt:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLTRRRC-EEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK

TrEMBL top hitse value%identityAlignment
A0A0A0KKF8 Uncharacterized protein8.2e-4094.79Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK
        MC+SATQSVLFHTIQSSKNRRS KRS  QVLRLTRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLAL+TEFQKKFPHLEQRK
Subjt:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK

A0A6J1B3H9 protein LITTLE ZIPPER 1-like3.5e-2273.42Show/hide
Query:  SSKNRRSLKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQ
        SSK R   K+SK+Q+ RL+R+RCEEK+ KD+EL NL+LYLENQ+IIEENEKLR+KAN+LHQENLALM+EFQKKFPHL++
Subjt:  SSKNRRSLKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQ

A0A6J1DZF5 protein LITTLE ZIPPER 2-like isoform X22.6e-3083.33Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLT-RRRC-EEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQ
        MCISAT+S  FH I +SKNRR LKRSKLQV RLT RRRC EEK+GKDIELKNLQLYLENQTIIEENEKLRE+ANILHQENLALMTE QKKF HL++
Subjt:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLT-RRRC-EEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQ

A0A6J1E319 protein LITTLE ZIPPER 2-like isoform X11.1e-3184.21Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLTRRRC-EEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQ
        MCISAT+S  FH I +SKNRR LKRSKLQV RLTRRRC EEK+GKDIELKNLQLYLENQTIIEENEKLRE+ANILHQENLALMTE QKKF HL++
Subjt:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLTRRRC-EEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQ

A0A6J1E3C5 protein LITTLE ZIPPER 1-like1.7e-3789.58Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK
        MCISATQS+LFH IQ+SKNRR  KRSKLQVLRLTRRRCEEKLGKDIELKNLQLYL+NQTII+EN+KLREKANILHQEN+ALMTEFQKKFPHL QRK
Subjt:  MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK

SwissProt top hitse value%identityAlignment
F4IG60 Protein LITTLE ZIPPER 18.8e-0741.76Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSL---KRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKK
        MC+S+++     T   +  R  L    +S +++ RL+RRR   +  K +E+ NL+LY+ENQ II ENEKL++KA +LHQEN  L +  Q K
Subjt:  MCISATQSVLFHTIQSSKNRRSL---KRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKK

Q9LZX5 Protein LITTLE ZIPPER 21.8e-0746.38Show/hide
Query:  RSLKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKF
        +S  ++ L++L LTRRR   K  K++E++NL+L++ENQ+II ENE L++KA +LH EN AL      K+
Subjt:  RSLKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKF

Arabidopsis top hitse value%identityAlignment
AT2G45450.1 protein binding6.3e-0841.76Show/hide
Query:  MCISATQSVLFHTIQSSKNRRSL---KRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKK
        MC+S+++     T   +  R  L    +S +++ RL+RRR   +  K +E+ NL+LY+ENQ II ENEKL++KA +LHQEN  L +  Q K
Subjt:  MCISATQSVLFHTIQSSKNRRSL---KRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKK

AT3G60890.1 protein binding1.3e-0846.38Show/hide
Query:  RSLKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKF
        +S  ++ L++L LTRRR   K  K++E++NL+L++ENQ+II ENE L++KA +LH EN AL      K+
Subjt:  RSLKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKF

AT3G60890.2 protein binding3.1e-0745.71Show/hide
Query:  RSLKRSKLQVLRLT-RRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKF
        +S  ++ L++L LT RRR   K  K++E++NL+L++ENQ+II ENE L++KA +LH EN AL      K+
Subjt:  RSLKRSKLQVLRLT-RRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCATCAGTGCAACACAGAGTGTTCTGTTTCATACAATTCAGAGTTCCAAGAACAGGAGAAGTTTAAAAAGATCCAAACTTCAAGTTCTGAGGCTTACTAGGAGGAG
ATGTGAAGAGAAGCTGGGGAAGGATATTGAGCTGAAGAATCTGCAGCTATATCTGGAGAATCAGACCATAATTGAAGAGAATGAGAAGCTAAGAGAGAAAGCCAATATCC
TTCATCAAGAGAATTTGGCTTTAATGACCGAGTTTCAGAAAAAATTCCCACATTTGGAACAGAGAAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGCATCAGTGCAACACAGAGTGTTCTGTTTCATACAATTCAGAGTTCCAAGAACAGGAGAAGTTTAAAAAGATCCAAACTTCAAGTTCTGAGGCTTACTAGGAGGAG
ATGTGAAGAGAAGCTGGGGAAGGATATTGAGCTGAAGAATCTGCAGCTATATCTGGAGAATCAGACCATAATTGAAGAGAATGAGAAGCTAAGAGAGAAAGCCAATATCC
TTCATCAAGAGAATTTGGCTTTAATGACCGAGTTTCAGAAAAAATTCCCACATTTGGAACAGAGAAAGTGA
Protein sequenceShow/hide protein sequence
MCISATQSVLFHTIQSSKNRRSLKRSKLQVLRLTRRRCEEKLGKDIELKNLQLYLENQTIIEENEKLREKANILHQENLALMTEFQKKFPHLEQRK