; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10009290 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10009290
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCCHC-type domain-containing protein
Genome locationChr06:4466794..4480700
RNA-Seq ExpressionHG10009290
SyntenyHG10009290
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
GO:0003724 - RNA helicase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR007529 - Zinc finger, HIT-type
IPR019339 - CBF1-interacting co-repressor CIR, N-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039710.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1 [Cucumis melo var. makuwa]1.6e-16270Show/hide
Query:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQ----PSPVVKKNENRKRHREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQP
        MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQ    P PV KKNE RKR REPEL G+ KYDVGN+DGPMSHQDYIERRRKEAN SQP
Subjt:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQ----PSPVVKKNENRKRHREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQP

Query:  YVTLTEDVLGASSLGLNLVEYE------------------SLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSE
        Y TLTEDVL ASS GLNLV+YE                  SLLNDYEEVKSKTEQRFA+AGEPVCVVCGRYGEYIC+ETNDDICS ECKFKLLEILKR E
Subjt:  YVTLTEDVLGASSLGLNLVEYE------------------SLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSE

Query:  ESSNCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLLKTSNQ--------------------------------
        E SNCEVKDVALPESKYILPSPE GEDTWDYKNHRWSKKKS+LCTYECWKCQKPGHLAEDCL+KTSNQ                                
Subjt:  ESSNCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLLKTSNQ--------------------------------

Query:  ------------------------------------------------VKCCKSTCRVTHIKDLLVCHYCFDKAFDKFYDMYTASWNVAGLSIISGSICC
                                                        VKCCKSTCRVT IKDLLVCHYCFDKAF+KFYDMYTASWN AGLSIISGSICC
Subjt:  ------------------------------------------------VKCCKSTCRVTHIKDLLVCHYCFDKAFDKFYDMYTASWNVAGLSIISGSICC

Query:  EDHFAWHRMNCFNADVEDTAYIINRKAKEE
        EDHFAWHRMNCFNADVEDTAYIINRK K++
Subjt:  EDHFAWHRMNCFNADVEDTAYIINRKAKEE

KAG7036125.1 putative ATP-dependent RNA helicase DDX59 [Cucurbita argyrosperma subsp. argyrosperma]6.1e-16269.32Show/hide
Query:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQPSPVVKKNENRKR-HREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQPYVT
        MGSRTNFYKNPSISY KDLNLSSALQNLRAYNIA GNAPPTD QP PV KKNENRKR  REPELSG+PKYDVG++DGPMSHQDYIE+RRKEAN+ QPY T
Subjt:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQPSPVVKKNENRKR-HREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQPYVT

Query:  LTEDVLGASSLGLNLVEYE------------------SLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSEESS
        LTEDVLG SS GLNLV YE                  SLLN++EEV+ KTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSEESS
Subjt:  LTEDVLGASSLGLNLVEYE------------------SLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSEESS

Query:  NCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLLKTSNQ-----------------------------------
        NCEVKDVALPE+K+ILPSPEFGEDTWDYKNHRWSK KSNLCTYECWKCQKPGHLAEDCL++TSNQ                                   
Subjt:  NCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLLKTSNQ-----------------------------------

Query:  ---------------------------------------------VKCCKSTCRVTHIKDLLVCHYCFDKAFDKFYDMYTASWNVAGLSIISGSICCEDH
                                                     VKCCKSTCRVT IKDLLVCHYCFDKAFDKFYDMYTASWN AGLSIISGSICCEDH
Subjt:  ---------------------------------------------VKCCKSTCRVTHIKDLLVCHYCFDKAFDKFYDMYTASWNVAGLSIISGSICCEDH

Query:  FAWHRMNCFNADVEDTAYIINRKAKEE
        FAWHRMNCFNADVED AYI+NR  K E
Subjt:  FAWHRMNCFNADVEDTAYIINRKAKEE

XP_008437097.1 PREDICTED: uncharacterized protein LOC103482617 [Cucumis melo]4.2e-16370.23Show/hide
Query:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQ----PSPVVKKNENRKRHREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQP
        MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQ    P PV KKNE RKR REPEL G+ KYDVGN+DGPMSHQDYIERRRKEAN SQP
Subjt:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQ----PSPVVKKNENRKRHREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQP

Query:  YVTLTEDVLGASSLGLNLVEYE------------------SLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSE
        Y TLTEDVL ASS GLNLV+YE                  SLLNDYEEVKSKTEQRFA+AGEPVCVVCGRYGEYIC+ETNDDICS ECKFKLLEILKR E
Subjt:  YVTLTEDVLGASSLGLNLVEYE------------------SLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSE

Query:  ESSNCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLLKTSNQ--------------------------------
        E SNCEVKDVALPESKYILPSPE GEDTWDYKNHRWSKKKS+LCTYECWKCQKPGHLAEDCL+KTSNQ                                
Subjt:  ESSNCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLLKTSNQ--------------------------------

Query:  ------------------------------------------------VKCCKSTCRVTHIKDLLVCHYCFDKAFDKFYDMYTASWNVAGLSIISGSICC
                                                        VKCCKSTCRVT IKDLLVCHYCFDKAFDKFYDMYTASWN AGLSIISGSICC
Subjt:  ------------------------------------------------VKCCKSTCRVTHIKDLLVCHYCFDKAFDKFYDMYTASWNVAGLSIISGSICC

Query:  EDHFAWHRMNCFNADVEDTAYIINRKAKEE
        EDHFAWHRMNCFNADVEDTAYIINRK K++
Subjt:  EDHFAWHRMNCFNADVEDTAYIINRKAKEE

XP_011654799.1 uncharacterized protein LOC101212105 [Cucumis sativus]2.9e-16470.47Show/hide
Query:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQ----PSPVVKKNENRKRHREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQP
        MGSRTNFYKNPSISYKKDL+LSSALQNLRAYNIATGNAPPTDVQ    P PVVKKNENRKR REPEL G+  YDVGN+DGPMSHQDYIERRRKEANKSQP
Subjt:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQ----PSPVVKKNENRKRHREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQP

Query:  YVTLTEDVLGASSLGLNLVEYE------------------SLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSE
        Y TLTEDVL ASS GLNLV+YE                  SLLNDY+EV+SKTEQRFA+AGEPVCVVCGRYGEYIC+ETNDDICSMECKFKLLEILKR E
Subjt:  YVTLTEDVLGASSLGLNLVEYE------------------SLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSE

Query:  ESSNCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLLKTSNQ--------------------------------
        E  NCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCL+KTSNQ                                
Subjt:  ESSNCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLLKTSNQ--------------------------------

Query:  ------------------------------------------------VKCCKSTCRVTHIKDLLVCHYCFDKAFDKFYDMYTASWNVAGLSIISGSICC
                                                        VKCCKSTCRVT IKDLLVCHYCFDKAFDKFYDMYTASWN AGLSIISGSICC
Subjt:  ------------------------------------------------VKCCKSTCRVTHIKDLLVCHYCFDKAFDKFYDMYTASWNVAGLSIISGSICC

Query:  EDHFAWHRMNCFNADVEDTAYIINRKAKEE
        EDHFAWHRMNCFNADVEDTAYIINRK K++
Subjt:  EDHFAWHRMNCFNADVEDTAYIINRKAKEE

XP_038874506.1 uncharacterized protein LOC120067139 [Benincasa hispida]5.7e-16871.83Show/hide
Query:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQPSPVVKKNENRKRHREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQPYVTL
        MGSRTNFYKN SISYKKDLNLSSALQNLRAYNIATGNAPPTDV P PVVKKNENRKRHREPELSGSPKYDVGN+DGPMSHQDYIERRRKEANKSQPY TL
Subjt:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQPSPVVKKNENRKRHREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQPYVTL

Query:  TEDVLGASSLGLNLVEYE------------------SLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSEESSN
        TEDVLG SSLGLNLVEYE                  SLLNDYE+VKSKTEQR AIAGEPVCVVCGRYGEYIC+ETNDDIC MECK KLLEILK SEESSN
Subjt:  TEDVLGASSLGLNLVEYE------------------SLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSEESSN

Query:  CEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLLKTSNQ------------------------------------
        C+VKDVALPESKYILPSPEFGEDTWDYKNH WSKKKSNLCTYECWKCQKPGHLAEDCL+K S+Q                                    
Subjt:  CEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLLKTSNQ------------------------------------

Query:  --------------------------------------------VKCCKSTCRVTHIKDLLVCHYCFDKAFDKFYDMYTASWNVAGLSIISGSICCEDHF
                                                    VKCCKSTCRVTHIKDLLVCHYCFDKAFDKFYDMYTASWN AGLSIISGSICCEDHF
Subjt:  --------------------------------------------VKCCKSTCRVTHIKDLLVCHYCFDKAFDKFYDMYTASWNVAGLSIISGSICCEDHF

Query:  AWHRMNCFNADVEDTAYIINRKAKEE
        AWHRMNCFNADVEDTAYI++RKAK++
Subjt:  AWHRMNCFNADVEDTAYIINRKAKEE

TrEMBL top hitse value%identityAlignment
A0A0A0KP93 CCHC-type domain-containing protein1.4e-16470.47Show/hide
Query:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQ----PSPVVKKNENRKRHREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQP
        MGSRTNFYKNPSISYKKDL+LSSALQNLRAYNIATGNAPPTDVQ    P PVVKKNENRKR REPEL G+  YDVGN+DGPMSHQDYIERRRKEANKSQP
Subjt:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQ----PSPVVKKNENRKRHREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQP

Query:  YVTLTEDVLGASSLGLNLVEYE------------------SLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSE
        Y TLTEDVL ASS GLNLV+YE                  SLLNDY+EV+SKTEQRFA+AGEPVCVVCGRYGEYIC+ETNDDICSMECKFKLLEILKR E
Subjt:  YVTLTEDVLGASSLGLNLVEYE------------------SLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSE

Query:  ESSNCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLLKTSNQ--------------------------------
        E  NCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCL+KTSNQ                                
Subjt:  ESSNCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLLKTSNQ--------------------------------

Query:  ------------------------------------------------VKCCKSTCRVTHIKDLLVCHYCFDKAFDKFYDMYTASWNVAGLSIISGSICC
                                                        VKCCKSTCRVT IKDLLVCHYCFDKAFDKFYDMYTASWN AGLSIISGSICC
Subjt:  ------------------------------------------------VKCCKSTCRVTHIKDLLVCHYCFDKAFDKFYDMYTASWNVAGLSIISGSICC

Query:  EDHFAWHRMNCFNADVEDTAYIINRKAKEE
        EDHFAWHRMNCFNADVEDTAYIINRK K++
Subjt:  EDHFAWHRMNCFNADVEDTAYIINRKAKEE

A0A1S3ATQ8 uncharacterized protein LOC1034826172.1e-16370.23Show/hide
Query:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQ----PSPVVKKNENRKRHREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQP
        MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQ    P PV KKNE RKR REPEL G+ KYDVGN+DGPMSHQDYIERRRKEAN SQP
Subjt:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQ----PSPVVKKNENRKRHREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQP

Query:  YVTLTEDVLGASSLGLNLVEYE------------------SLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSE
        Y TLTEDVL ASS GLNLV+YE                  SLLNDYEEVKSKTEQRFA+AGEPVCVVCGRYGEYIC+ETNDDICS ECKFKLLEILKR E
Subjt:  YVTLTEDVLGASSLGLNLVEYE------------------SLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSE

Query:  ESSNCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLLKTSNQ--------------------------------
        E SNCEVKDVALPESKYILPSPE GEDTWDYKNHRWSKKKS+LCTYECWKCQKPGHLAEDCL+KTSNQ                                
Subjt:  ESSNCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLLKTSNQ--------------------------------

Query:  ------------------------------------------------VKCCKSTCRVTHIKDLLVCHYCFDKAFDKFYDMYTASWNVAGLSIISGSICC
                                                        VKCCKSTCRVT IKDLLVCHYCFDKAFDKFYDMYTASWN AGLSIISGSICC
Subjt:  ------------------------------------------------VKCCKSTCRVTHIKDLLVCHYCFDKAFDKFYDMYTASWNVAGLSIISGSICC

Query:  EDHFAWHRMNCFNADVEDTAYIINRKAKEE
        EDHFAWHRMNCFNADVEDTAYIINRK K++
Subjt:  EDHFAWHRMNCFNADVEDTAYIINRKAKEE

A0A5A7T8Y4 P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 17.8e-16370Show/hide
Query:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQ----PSPVVKKNENRKRHREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQP
        MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQ    P PV KKNE RKR REPEL G+ KYDVGN+DGPMSHQDYIERRRKEAN SQP
Subjt:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQ----PSPVVKKNENRKRHREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQP

Query:  YVTLTEDVLGASSLGLNLVEYE------------------SLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSE
        Y TLTEDVL ASS GLNLV+YE                  SLLNDYEEVKSKTEQRFA+AGEPVCVVCGRYGEYIC+ETNDDICS ECKFKLLEILKR E
Subjt:  YVTLTEDVLGASSLGLNLVEYE------------------SLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSE

Query:  ESSNCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLLKTSNQ--------------------------------
        E SNCEVKDVALPESKYILPSPE GEDTWDYKNHRWSKKKS+LCTYECWKCQKPGHLAEDCL+KTSNQ                                
Subjt:  ESSNCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLLKTSNQ--------------------------------

Query:  ------------------------------------------------VKCCKSTCRVTHIKDLLVCHYCFDKAFDKFYDMYTASWNVAGLSIISGSICC
                                                        VKCCKSTCRVT IKDLLVCHYCFDKAF+KFYDMYTASWN AGLSIISGSICC
Subjt:  ------------------------------------------------VKCCKSTCRVTHIKDLLVCHYCFDKAFDKFYDMYTASWNVAGLSIISGSICC

Query:  EDHFAWHRMNCFNADVEDTAYIINRKAKEE
        EDHFAWHRMNCFNADVEDTAYIINRK K++
Subjt:  EDHFAWHRMNCFNADVEDTAYIINRKAKEE

A0A6J1H0R9 uncharacterized protein LOC111459101 isoform X11.5e-16168.85Show/hide
Query:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQPSPVVKKNENRKR-HREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQPYVT
        MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIA GNAPPTD +P PV KKNENRKR  REPELSG+PKYDVG++DGPMSHQDYIE+RRKEAN+ QPY  
Subjt:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQPSPVVKKNENRKR-HREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQPYVT

Query:  LTEDVLGASSLGLNLVEYE------------------SLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSEESS
        LTEDVLG SS GLNLV YE                  SLLN++EEV+ KTEQRFA AGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSEESS
Subjt:  LTEDVLGASSLGLNLVEYE------------------SLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSEESS

Query:  NCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLLKTSNQ-----------------------------------
        NCEVKDVALPE+KYILPSPEFGEDTWDYKNHRWSK KSNLCTYECWKCQKPGHLAEDCL+++SNQ                                   
Subjt:  NCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLLKTSNQ-----------------------------------

Query:  ---------------------------------------------VKCCKSTCRVTHIKDLLVCHYCFDKAFDKFYDMYTASWNVAGLSIISGSICCEDH
                                                     VKCCKSTCRVT+IKDLLVCHYCFDKAFDKFYDMYTASWN AGLSIISGSICCEDH
Subjt:  ---------------------------------------------VKCCKSTCRVTHIKDLLVCHYCFDKAFDKFYDMYTASWNVAGLSIISGSICCEDH

Query:  FAWHRMNCFNADVEDTAYIINRKAKEE
        FAWHRMNCFNADVED AYI+NR  K E
Subjt:  FAWHRMNCFNADVEDTAYIINRKAKEE

A0A6J1K849 uncharacterized protein LOC111491515 isoform X16.6e-16269.65Show/hide
Query:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQPSPVVKKNENRKR-HREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQPYVT
        MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIA GNAPPTD QPSPV KKNENRKR  RE ELSG+PKYDVG++DGPMSHQDYIE+RRKEAN+ QPY T
Subjt:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQPSPVVKKNENRKR-HREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQPYVT

Query:  LTEDVLGASSLGLNLVEYE------------------SLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSEESS
        L+EDVLG SS GLNLV YE                  SLLN++EEV+ KTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSEESS
Subjt:  LTEDVLGASSLGLNLVEYE------------------SLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSEESS

Query:  NCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLLKTSNQ-----------------------------------
        NCEVKDVALPE+KYILPSPEFGEDTWDYKNHRWSK KSNLCTYECWKCQKPGHLAEDCL++TSNQ                                   
Subjt:  NCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLLKTSNQ-----------------------------------

Query:  ---------------------------------------------VKCCKSTCRVTHIKDLLVCHYCFDKAFDKFYDMYTASWNVAGLSIISGSICCEDH
                                                     VKCCKSTCRVT IKDLLVCHYCFDKAFDKFYDMYTASWN AGLSIISGSICCEDH
Subjt:  ---------------------------------------------VKCCKSTCRVTHIKDLLVCHYCFDKAFDKFYDMYTASWNVAGLSIISGSICCEDH

Query:  FAWHRMNCFNADVEDTAYIINRKAK
        FAWHRMNCFNADVED AYI+NR  K
Subjt:  FAWHRMNCFNADVEDTAYIINRKAK

SwissProt top hitse value%identityAlignment
Q0E2Z7 DEAD-box ATP-dependent RNA helicase 411.2e-1152.05Show/hide
Query:  NDYEEVKSKT---EQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSEESSNCEVKDVALP
        N+ EE   K    EQR A+ GEP CV+CGRYGEYIC++T+DDICS+ECK  LL  L           K V LP
Subjt:  NDYEEVKSKT---EQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSEESSNCEVKDVALP

Q3EBD3 DEAD-box ATP-dependent RNA helicase 417.9e-1165.22Show/hide
Query:  VKSKT-EQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLL
        VK K+ +QR  ++GEP CV+C RYGEYIC+ETNDD+CS+ECK  LL
Subjt:  VKSKT-EQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLL

Q5T1V6 Probable ATP-dependent RNA helicase DDX593.2e-1260.34Show/hide
Query:  EEVKSKTE-QRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSEESS
        E VKS ++ QR+A  GEP+CVVCGRYGEYIC++T++D+CS+ECK K L  +K  EE S
Subjt:  EEVKSKTE-QRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSEESS

Q66HG7 Probable ATP-dependent RNA helicase DDX596.0e-1159.65Show/hide
Query:  EEVKSKTE-QRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSEES
        E VKS ++ QR+   GEPVCVVCGRYGEYIC++T++D+CS+ECK K L  +K  E S
Subjt:  EEVKSKTE-QRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSEES

Q9DBN9 Probable ATP-dependent RNA helicase DDX596.0e-1159.65Show/hide
Query:  EEVKSKTE-QRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSEES
        E VKS ++ QR+   GEPVCVVCGRYGEYIC++T++D+CS+ECK K L  +K  E S
Subjt:  EEVKSKTE-QRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSEES

Arabidopsis top hitse value%identityAlignment
AT2G03010.1 Family of unknown function (DUF577)3.2e-0744.23Show/hide
Query:  VRRDEEAAAKEEQLKREQARKRDAEFRLEQLRTARGLAPVIDTAKPVETDLKPGHINLFEGIKIFDPVKGSEN----GGVEDGSKK-------KRMKKEE
        VR+DEEAAA+EEQ+KRE ARKRDAE RLE LR  RGLAP+    + V       +          D V+G  +    GG E   KK       K +K+E 
Subjt:  VRRDEEAAAKEEQLKREQARKRDAEFRLEQLRTARGLAPVIDTAKPVETDLKPGHINLFEGIKIFDPVKGSEN----GGVEDGSKK-------KRMKKEE

Query:  VEKK
        VEK+
Subjt:  VEKK

AT3G02065.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein5.6e-1265.22Show/hide
Query:  VKSKT-EQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLL
        VK K+ +QR  ++GEP CV+C RYGEYIC+ETNDD+CS+ECK  LL
Subjt:  VKSKT-EQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLL

AT3G02065.3 P-loop containing nucleoside triphosphate hydrolases superfamily protein5.6e-1265.22Show/hide
Query:  VKSKT-EQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLL
        VK K+ +QR  ++GEP CV+C RYGEYIC+ETNDD+CS+ECK  LL
Subjt:  VKSKT-EQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLL

AT4G16530.1 Family of unknown function (DUF577)1.3e-4849.41Show/hide
Query:  LDLVIMGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEFRLEQLRTARGLAP---------------------VIDTAKPVET
        L+   MGGHGGLNILPQKRWNVYN++NREKVR++EEAAA+EEQ+KRE+ARKRDAE RLE LR  RGLAP                     V  TA  VE+
Subjt:  LDLVIMGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEFRLEQLRTARGLAP---------------------VIDTAKPVET

Query:  ----DLKPGHINLFEGIKIFDP--VKGSENGGVEDGSKKKRMKKE----------EVEKKVITPEDEKYKLGYGVAGKGVKLPWYLERPG--KDDAESDE
            + K GHINLFEGI+IFDP  +K ++    E+  ++K+M+KE          +   +   P++EKY+LGYGVAGKGVK PWYLE+     D    ++
Subjt:  ----DLKPGHINLFEGIKIFDP--VKGSENGGVEDGSKKKRMKKE----------EVEKKVITPEDEKYKLGYGVAGKGVKLPWYLERPG--KDDAESDE

Query:  NDGSSRVGSGNVKK-GEKKTLEELRAERLKREQKEKGRERALIAERSRKSRTASR
        +DG         KK   KK+L+ELR ERLKRE+ EK RERAL  ++S+++   SR
Subjt:  NDGSSRVGSGNVKK-GEKKTLEELRAERLKREQKEKGRERALIAERSRKSRTASR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGCAGAACAAATTTCTACAAGAATCCTTCCATCTCCTACAAGAAGGACTTGAATCTCTCCTCCGCTCTTCAAAACCTAAGAGCGTATAACATTGCTACCGGCAA
TGCTCCTCCAACCGATGTTCAACCATCTCCTGTCGTGAAGAAGAACGAGAACCGGAAACGCCATCGGGAGCCAGAACTATCTGGTAGTCCAAAGTATGATGTTGGAAATA
ATGACGGCCCTATGTCTCATCAAGATTACATTGAAAGGAGAAGAAAAGAAGCAAATAAATCTCAACCTTATGTGACACTTACGGAAGATGTTTTGGGAGCTTCCAGCTTG
GGCTTGAACTTAGTTGAATATGAAAGTCTCTTGAATGATTACGAGGAAGTTAAAAGCAAAACTGAGCAGCGTTTTGCCATTGCGGGAGAACCTGTTTGTGTAGTATGTGG
TAGATATGGAGAATACATATGCAATGAAACCAATGATGACATCTGCAGCATGGAGTGCAAATTCAAGCTTTTGGAAATTCTTAAACGGAGCGAGGAGTCCTCAAACTGTG
AAGTGAAAGATGTTGCATTACCAGAAAGTAAATATATCCTGCCTTCCCCAGAGTTCGGGGAGGACACCTGGGATTATAAGAACCATCGCTGGTCCAAAAAGAAATCCAAT
CTTTGTACTTATGAATGTTGGAAATGTCAAAAGCCGGGACACCTTGCTGAAGATTGTTTGTTGAAAACCAGTAACCAGGTAAAATGCTGCAAATCAACATGCAGGGTGAC
TCACATCAAGGATCTTCTGGTGTGTCATTACTGTTTTGACAAAGCTTTCGACAAGTTCTATGATATGTATACTGCATCTTGGAACGTAGCTGGGCTTTCAATCATATCAG
GTTCCATTTGCTGTGAAGATCATTTTGCGTGGCATCGGATGAACTGTTTTAACGCAGATGTAGAGGACACTGCCTACATCATCAATAGGAAAGCGAAAGAAGAGAACCTG
CAGGTGAATCATAATCTTAGTTTCTTAGATTTGGTGATTATGGGAGGTCATGGAGGTTTAAATATTCTTCCCCAAAAGCGATGGAACGTGTACAACTATGAGAACAGAGA
GAAAGTGCGGCGAGATGAAGAAGCTGCAGCCAAAGAAGAACAGCTTAAACGCGAGCAGGCTAGGAAAAGGGATGCTGAGTTTCGTCTCGAGCAGCTTCGTACTGCACGGG
GTTTAGCTCCGGTAATTGACACTGCAAAGCCAGTAGAAACAGACCTGAAACCTGGTCACATAAATCTATTTGAAGGCATCAAGATTTTTGACCCAGTTAAGGGTTCGGAA
AATGGAGGAGTTGAAGATGGGTCTAAGAAGAAGAGGATGAAGAAGGAAGAAGTGGAAAAAAAGGTCATCACACCTGAAGATGAGAAGTATAAGTTAGGTTATGGTGTTGC
TGGAAAAGGAGTCAAATTGCCATGGTACCTTGAGAGGCCTGGCAAGGACGATGCTGAGAGTGACGAAAACGATGGATCGTCAAGAGTAGGGAGTGGAAATGTAAAAAAGG
GAGAAAAAAAGACCTTGGAAGAATTGAGGGCCGAGCGTCTGAAACGCGAGCAGAAGGAGAAGGGAAGGGAGCGTGCTTTAATCGCAGAGAGAAGTCGTAAGAGTAGAACA
GCTTCAAGGGAAGGAGATTCATCTTCCAGGAGATTTATCCTGCGGTTCCGACCGTTCAACATATCCCCTTGTAGCCTACAAACAGACGGTAAGATGTGTCAATCAACTGT
ACAGAAAGACGAAAAGGGAAAAAAGAGAACCCAACTACTCACAGTATTCAAGTCAGCATCATTGAAGTTTCCATTCTCTGAAAGAGAACCTCTTGGAGAGGACCCTTCTT
CAGAACCTTCTGGTACTGGAGAAGGTGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGAGCAGAACAAATTTCTACAAGAATCCTTCCATCTCCTACAAGAAGGACTTGAATCTCTCCTCCGCTCTTCAAAACCTAAGAGCGTATAACATTGCTACCGGCAA
TGCTCCTCCAACCGATGTTCAACCATCTCCTGTCGTGAAGAAGAACGAGAACCGGAAACGCCATCGGGAGCCAGAACTATCTGGTAGTCCAAAGTATGATGTTGGAAATA
ATGACGGCCCTATGTCTCATCAAGATTACATTGAAAGGAGAAGAAAAGAAGCAAATAAATCTCAACCTTATGTGACACTTACGGAAGATGTTTTGGGAGCTTCCAGCTTG
GGCTTGAACTTAGTTGAATATGAAAGTCTCTTGAATGATTACGAGGAAGTTAAAAGCAAAACTGAGCAGCGTTTTGCCATTGCGGGAGAACCTGTTTGTGTAGTATGTGG
TAGATATGGAGAATACATATGCAATGAAACCAATGATGACATCTGCAGCATGGAGTGCAAATTCAAGCTTTTGGAAATTCTTAAACGGAGCGAGGAGTCCTCAAACTGTG
AAGTGAAAGATGTTGCATTACCAGAAAGTAAATATATCCTGCCTTCCCCAGAGTTCGGGGAGGACACCTGGGATTATAAGAACCATCGCTGGTCCAAAAAGAAATCCAAT
CTTTGTACTTATGAATGTTGGAAATGTCAAAAGCCGGGACACCTTGCTGAAGATTGTTTGTTGAAAACCAGTAACCAGGTAAAATGCTGCAAATCAACATGCAGGGTGAC
TCACATCAAGGATCTTCTGGTGTGTCATTACTGTTTTGACAAAGCTTTCGACAAGTTCTATGATATGTATACTGCATCTTGGAACGTAGCTGGGCTTTCAATCATATCAG
GTTCCATTTGCTGTGAAGATCATTTTGCGTGGCATCGGATGAACTGTTTTAACGCAGATGTAGAGGACACTGCCTACATCATCAATAGGAAAGCGAAAGAAGAGAACCTG
CAGGTGAATCATAATCTTAGTTTCTTAGATTTGGTGATTATGGGAGGTCATGGAGGTTTAAATATTCTTCCCCAAAAGCGATGGAACGTGTACAACTATGAGAACAGAGA
GAAAGTGCGGCGAGATGAAGAAGCTGCAGCCAAAGAAGAACAGCTTAAACGCGAGCAGGCTAGGAAAAGGGATGCTGAGTTTCGTCTCGAGCAGCTTCGTACTGCACGGG
GTTTAGCTCCGGTAATTGACACTGCAAAGCCAGTAGAAACAGACCTGAAACCTGGTCACATAAATCTATTTGAAGGCATCAAGATTTTTGACCCAGTTAAGGGTTCGGAA
AATGGAGGAGTTGAAGATGGGTCTAAGAAGAAGAGGATGAAGAAGGAAGAAGTGGAAAAAAAGGTCATCACACCTGAAGATGAGAAGTATAAGTTAGGTTATGGTGTTGC
TGGAAAAGGAGTCAAATTGCCATGGTACCTTGAGAGGCCTGGCAAGGACGATGCTGAGAGTGACGAAAACGATGGATCGTCAAGAGTAGGGAGTGGAAATGTAAAAAAGG
GAGAAAAAAAGACCTTGGAAGAATTGAGGGCCGAGCGTCTGAAACGCGAGCAGAAGGAGAAGGGAAGGGAGCGTGCTTTAATCGCAGAGAGAAGTCGTAAGAGTAGAACA
GCTTCAAGGGAAGGAGATTCATCTTCCAGGAGATTTATCCTGCGGTTCCGACCGTTCAACATATCCCCTTGTAGCCTACAAACAGACGGTAAGATGTGTCAATCAACTGT
ACAGAAAGACGAAAAGGGAAAAAAGAGAACCCAACTACTCACAGTATTCAAGTCAGCATCATTGAAGTTTCCATTCTCTGAAAGAGAACCTCTTGGAGAGGACCCTTCTT
CAGAACCTTCTGGTACTGGAGAAGGTGGTTGA
Protein sequenceShow/hide protein sequence
MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPPTDVQPSPVVKKNENRKRHREPELSGSPKYDVGNNDGPMSHQDYIERRRKEANKSQPYVTLTEDVLGASSL
GLNLVEYESLLNDYEEVKSKTEQRFAIAGEPVCVVCGRYGEYICNETNDDICSMECKFKLLEILKRSEESSNCEVKDVALPESKYILPSPEFGEDTWDYKNHRWSKKKSN
LCTYECWKCQKPGHLAEDCLLKTSNQVKCCKSTCRVTHIKDLLVCHYCFDKAFDKFYDMYTASWNVAGLSIISGSICCEDHFAWHRMNCFNADVEDTAYIINRKAKEENL
QVNHNLSFLDLVIMGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEFRLEQLRTARGLAPVIDTAKPVETDLKPGHINLFEGIKIFDPVKGSE
NGGVEDGSKKKRMKKEEVEKKVITPEDEKYKLGYGVAGKGVKLPWYLERPGKDDAESDENDGSSRVGSGNVKKGEKKTLEELRAERLKREQKEKGRERALIAERSRKSRT
ASREGDSSSRRFILRFRPFNISPCSLQTDGKMCQSTVQKDEKGKKRTQLLTVFKSASLKFPFSEREPLGEDPSSEPSGTGEGG