; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10009438 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10009438
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionYcf20-like protein isoform X1
Genome locationChr06:5952682..5953089
RNA-Seq ExpressionHG10009438
SyntenyHG10009438
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007572 - Uncharacterised protein family Ycf20


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055154.1 ycf20-like protein isoform X1 [Cucumis melo var. makuwa]7.4e-6595.59Show/hide
Query:  MNPSYWRYDTIKSRPS-PRSLRIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVT
        MNPSYWRYD +KSRPS PRS R+KAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVT
Subjt:  MNPSYWRYDTIKSRPS-PRSLRIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVT

Query:  RFYYSRPKVTFPIALLNNFKMGFTYGLFIDASKLAS
        RFYYSRPKVTFPIALLNNFKMGFTYGLFIDA KLAS
Subjt:  RFYYSRPKVTFPIALLNNFKMGFTYGLFIDASKLAS

XP_004143642.1 uncharacterized protein ycf20 [Cucumis sativus]7.4e-6595.59Show/hide
Query:  MNPSYWRYDTIKSRPS-PRSLRIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVT
        MNPSYWRYD +KSRPS PRS R+KAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVT
Subjt:  MNPSYWRYDTIKSRPS-PRSLRIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVT

Query:  RFYYSRPKVTFPIALLNNFKMGFTYGLFIDASKLAS
        RFYYSRPKVTFPIALLNNFKMGFTYGLFIDA KLAS
Subjt:  RFYYSRPKVTFPIALLNNFKMGFTYGLFIDASKLAS

XP_022928979.1 uncharacterized protein ycf20 [Cucurbita moschata]1.6e-6496.27Show/hide
Query:  NPSYWRYDTIKSRPSPRSLRIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRF
        N SYWRYD IKSRPSPRSL IKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRF
Subjt:  NPSYWRYDTIKSRPSPRSLRIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRF

Query:  YYSRPKVTFPIALLNNFKMGFTYGLFIDASKLAS
        YYSRPKVTFP+ALLNNFKMGFTYGLFIDA KLAS
Subjt:  YYSRPKVTFPIALLNNFKMGFTYGLFIDASKLAS

XP_022969949.1 uncharacterized protein ycf20 [Cucurbita maxima]1.3e-6496.27Show/hide
Query:  NPSYWRYDTIKSRPSPRSLRIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRF
        N SYWRYD IKSRPSPRSL IKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRF
Subjt:  NPSYWRYDTIKSRPSPRSLRIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRF

Query:  YYSRPKVTFPIALLNNFKMGFTYGLFIDASKLAS
        YYSRPKVTFP+ALLNNFKMGFTYGLFIDA KLAS
Subjt:  YYSRPKVTFPIALLNNFKMGFTYGLFIDASKLAS

XP_023549885.1 uncharacterized protein LOC111808248 [Cucurbita pepo subsp. pepo]2.8e-6495.52Show/hide
Query:  NPSYWRYDTIKSRPSPRSLRIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRF
        N SYWRYD IKSRPSPRSL IKAVQDTGGPRRLVDIIRLVPE+SRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRF
Subjt:  NPSYWRYDTIKSRPSPRSLRIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRF

Query:  YYSRPKVTFPIALLNNFKMGFTYGLFIDASKLAS
        YYSRPKVTFP+ALLNNFKMGFTYGLFIDA KLAS
Subjt:  YYSRPKVTFPIALLNNFKMGFTYGLFIDASKLAS

TrEMBL top hitse value%identityAlignment
A0A0A0KPS1 Uncharacterized protein3.6e-6595.59Show/hide
Query:  MNPSYWRYDTIKSRPS-PRSLRIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVT
        MNPSYWRYD +KSRPS PRS R+KAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVT
Subjt:  MNPSYWRYDTIKSRPS-PRSLRIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVT

Query:  RFYYSRPKVTFPIALLNNFKMGFTYGLFIDASKLAS
        RFYYSRPKVTFPIALLNNFKMGFTYGLFIDA KLAS
Subjt:  RFYYSRPKVTFPIALLNNFKMGFTYGLFIDASKLAS

A0A1S3CT33 uncharacterized protein ycf20 isoform X13.0e-6494.85Show/hide
Query:  MNPSYWRYDTIKSRPS-PRSLRIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVT
        MN SYWRYD +KSRPS PRS R+KAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVT
Subjt:  MNPSYWRYDTIKSRPS-PRSLRIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVT

Query:  RFYYSRPKVTFPIALLNNFKMGFTYGLFIDASKLAS
        RFYYSRPKVTFPIALLNNFKMGFTYGLFIDA KLAS
Subjt:  RFYYSRPKVTFPIALLNNFKMGFTYGLFIDASKLAS

A0A5D3BMH1 Ycf20-like protein isoform X13.6e-6595.59Show/hide
Query:  MNPSYWRYDTIKSRPS-PRSLRIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVT
        MNPSYWRYD +KSRPS PRS R+KAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVT
Subjt:  MNPSYWRYDTIKSRPS-PRSLRIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVT

Query:  RFYYSRPKVTFPIALLNNFKMGFTYGLFIDASKLAS
        RFYYSRPKVTFPIALLNNFKMGFTYGLFIDA KLAS
Subjt:  RFYYSRPKVTFPIALLNNFKMGFTYGLFIDASKLAS

A0A6J1ESY7 uncharacterized protein ycf207.9e-6596.27Show/hide
Query:  NPSYWRYDTIKSRPSPRSLRIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRF
        N SYWRYD IKSRPSPRSL IKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRF
Subjt:  NPSYWRYDTIKSRPSPRSLRIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRF

Query:  YYSRPKVTFPIALLNNFKMGFTYGLFIDASKLAS
        YYSRPKVTFP+ALLNNFKMGFTYGLFIDA KLAS
Subjt:  YYSRPKVTFPIALLNNFKMGFTYGLFIDASKLAS

A0A6J1I440 uncharacterized protein ycf206.1e-6596.27Show/hide
Query:  NPSYWRYDTIKSRPSPRSLRIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRF
        N SYWRYD IKSRPSPRSL IKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRF
Subjt:  NPSYWRYDTIKSRPSPRSLRIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRF

Query:  YYSRPKVTFPIALLNNFKMGFTYGLFIDASKLAS
        YYSRPKVTFP+ALLNNFKMGFTYGLFIDA KLAS
Subjt:  YYSRPKVTFPIALLNNFKMGFTYGLFIDASKLAS

SwissProt top hitse value%identityAlignment
P51214 Uncharacterized protein ycf203.3e-0746.15Show/hide
Query:  GGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYS-RPKVTFPIALLNNFKMGFTYGLFIDASKLAS
        G ISLL GF+++  +S   G  G   +IAA + V   E V++  YS + K    I LLNN K+G TYGLF+DA KL S
Subjt:  GGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYS-RPKVTFPIALLNNFKMGFTYGLFIDASKLAS

P72983 Ycf20-like protein1.5e-0734.29Show/hide
Query:  RLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSR--PKVTFPIALLNNFKMGFTYGLFIDA
        RL  I+ +  +    +FR+P RR     +S L GF+V   ++ + G     DV+ A   +L  E V R++Y R          +LN FKMG +Y LF++A
Subjt:  RLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSR--PKVTFPIALLNNFKMGFTYGLFIDA

Query:  SKLAS
         KL S
Subjt:  SKLAS

Q1XDS2 Uncharacterized protein ycf203.0e-0841.24Show/hide
Query:  LVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPK-VTFPIALLNNFKMGFTYGLFIDASKLAS
        L+  L+   + S S     G ISLL GF+++  +S   G  G   +IAA + V  TE  ++  YS  K +   I L NNFK+G TYGLF+DA KL S
Subjt:  LVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPK-VTFPIALLNNFKMGFTYGLFIDASKLAS

Arabidopsis top hitse value%identityAlignment
AT5G43050.1 Protein of unknown function (DUF565)8.4e-5178.36Show/hide
Query:  YDTIKSRPSPRSLR----IKAVQDTGG--PRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRF
        + T  S P  R  R    I+A+Q+T G  PRRL+DIIR VPE+SRNYF+ PSRR LFGGISLLGGFYVAQTISLSFGALGVNDVIAAV+CVLLTEYVTRF
Subjt:  YDTIKSRPSPRSLR----IKAVQDTGG--PRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRF

Query:  YYSRPKVTFPIALLNNFKMGFTYGLFIDASKLAS
        YYSR  VTFPIALLNNFKMGFTYGLFIDA KLAS
Subjt:  YYSRPKVTFPIALLNNFKMGFTYGLFIDASKLAS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCCTTCATATTGGAGATATGATACAATTAAATCACGACCATCCCCTCGTAGTCTTCGTATCAAAGCTGTACAAGATACTGGAGGTCCTCGTAGGTTAGTTGATAT
CATTAGACTCGTGCCTGAGCTCTCGAGAAATTACTTTCGAAGTCCTTCGAGGAGGGCCCTTTTCGGAGGAATCTCATTGTTGGGTGGCTTTTATGTGGCACAGACTATAT
CATTGTCATTTGGAGCTTTAGGAGTAAATGATGTGATTGCTGCTGTGGTATGTGTTCTTCTCACCGAGTATGTTACTCGATTTTATTACAGTCGACCGAAGGTAACTTTT
CCCATTGCTCTACTAAACAACTTCAAAATGGGATTCACTTATGGTCTTTTCATTGATGCTTCCAAACTTGCTAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATCCTTCATATTGGAGATATGATACAATTAAATCACGACCATCCCCTCGTAGTCTTCGTATCAAAGCTGTACAAGATACTGGAGGTCCTCGTAGGTTAGTTGATAT
CATTAGACTCGTGCCTGAGCTCTCGAGAAATTACTTTCGAAGTCCTTCGAGGAGGGCCCTTTTCGGAGGAATCTCATTGTTGGGTGGCTTTTATGTGGCACAGACTATAT
CATTGTCATTTGGAGCTTTAGGAGTAAATGATGTGATTGCTGCTGTGGTATGTGTTCTTCTCACCGAGTATGTTACTCGATTTTATTACAGTCGACCGAAGGTAACTTTT
CCCATTGCTCTACTAAACAACTTCAAAATGGGATTCACTTATGGTCTTTTCATTGATGCTTCCAAACTTGCTAGTTAA
Protein sequenceShow/hide protein sequence
MNPSYWRYDTIKSRPSPRSLRIKAVQDTGGPRRLVDIIRLVPELSRNYFRSPSRRALFGGISLLGGFYVAQTISLSFGALGVNDVIAAVVCVLLTEYVTRFYYSRPKVTF
PIALLNNFKMGFTYGLFIDASKLAS