CuGenDBv2

Gene ID	HG10009449
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	chromosome transmission fidelity protein 8 homolog
Genome location	Chr06:6095445..6097684
RNA-Seq Expression	HG10009449
Synteny	HG10009449
Gene Ontology terms	GO:0007064 - mitotic sister chromatid cohesion (biological process) GO:0031390 - Ctf18 RFC-like complex (cellular component)
InterPro domains	IPR018607 - Chromosome transmission fidelity protein 8

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0055164.1 hypothetical protein E6C27_scaffold231G00960 [Cucumis melo var. makuwa]

6.5e-64

89.29

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Query:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLQIGILCRPSAQEVYTFTVGYHELTGSKVPLKKPLLVLKKKRCVDEDQNNDTKSANAELEVI
        MQIKLKCNCGETKCLEWA+VELQGVVEPQSTFQDR+QNL+IGILCRPSAQE+YTFTVGYHELTGSKV LKKPLLVLKK R VDEDQ++D KS NAELEVI
Subjt:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLQIGILCRPSAQEVYTFTVGYHELTGSKVPLKKPLLVLKKKRCVDEDQNNDTKSANAELEVI

Query:  GIIRQRILFKTRPKALISKPQPLVKERSRASGTVVSGQTT
        GIIRQRILFKTRPKALISKP+PLVKERSRASG+ V GQTT
Subjt:  GIIRQRILFKTRPKALISKPQPLVKERSRASGTVVSGQTT

XP_004143632.1 putative uncharacterized protein DDB_G0287975 isoform X1 [Cucumis sativus]

1.5e-65

91.43

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Query:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLQIGILCRPSAQEVYTFTVGYHELTGSKVPLKKPLLVLKKKRCVDEDQNNDTKSANAELEVI
        M+IKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNL+IGILCRPSAQEVYTFTVGYHELTGSK+ LKKPLLVLKK R VDEDQ++DTKS NAELEVI
Subjt:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLQIGILCRPSAQEVYTFTVGYHELTGSKVPLKKPLLVLKKKRCVDEDQNNDTKSANAELEVI

Query:  GIIRQRILFKTRPKALISKPQPLVKERSRASGTVVSGQTT
        GIIRQRILFKTRPKALISKPQPLVKERSRASG+ V+GQTT
Subjt:  GIIRQRILFKTRPKALISKPQPLVKERSRASGTVVSGQTT

XP_008467231.1 PREDICTED: putative uncharacterized protein DDB_G0287975 [Cucumis melo]

3.2e-63

89.29

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Query:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLQIGILCRPSAQEVYTFTVGYHELTGSKVPLKKPLLVLKKKRCVDEDQNNDTKSANAELEVI
        MQIKLKCNCGETKCLEWAVVELQGVVE QSTFQDR+QNL+IGILCRPSAQE+YTFTVGYHELTGSKV LKKPLLVLKK R VDEDQ++D KS NAELEVI
Subjt:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLQIGILCRPSAQEVYTFTVGYHELTGSKVPLKKPLLVLKKKRCVDEDQNNDTKSANAELEVI

Query:  GIIRQRILFKTRPKALISKPQPLVKERSRASGTVVSGQTT
        GIIRQRILFKTRPKALISKP+PLVKERSRASG+ V GQTT
Subjt:  GIIRQRILFKTRPKALISKPQPLVKERSRASGTVVSGQTT

XP_023551664.1 putative uncharacterized protein DDB_G0287975 [Cucurbita pepo subsp. pepo]

3.2e-63

87.14

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Query:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLQIGILCRPSAQEVYTFTVGYHELTGSKVPLKKPLLVLKKKRCVDEDQNNDTKSANAELEVI
        MQIK+KCNCGETKCLEWAVVELQG+VE Q +F+DRLQ L+IG+LCRPSAQEVYTFTVGYHELTGSKVPLKKPLLVLKKK+CVDEDQ+ DTKSA AELEVI
Subjt:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLQIGILCRPSAQEVYTFTVGYHELTGSKVPLKKPLLVLKKKRCVDEDQNNDTKSANAELEVI

Query:  GIIRQRILFKTRPKALISKPQPLVKERSRASGTVVSGQTT
        GIIRQRILFKTRPKALISKPQP VKERSRASG+ V+GQ T
Subjt:  GIIRQRILFKTRPKALISKPQPLVKERSRASGTVVSGQTT

XP_038906846.1 putative uncharacterized protein DDB_G0287975 [Benincasa hispida]

8.2e-67

93.57

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Query:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLQIGILCRPSAQEVYTFTVGYHELTGSKVPLKKPLLVLKKKRCVDEDQNNDTKSANAELEVI
        MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNL+IGILCRPSAQEVYTFTVGYHELTGSKVPLKKPLLVLKK R VDEDQ++D KSANAELEVI
Subjt:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLQIGILCRPSAQEVYTFTVGYHELTGSKVPLKKPLLVLKKKRCVDEDQNNDTKSANAELEVI

Query:  GIIRQRILFKTRPKALISKPQPLVKERSRASGTVVSGQTT
        GIIRQRILFKTRPKALISKPQPLVKERSRASG+ V+GQTT
Subjt:  GIIRQRILFKTRPKALISKPQPLVKERSRASGTVVSGQTT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KPT4 Uncharacterized protein

7.5e-66

91.43

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Query:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLQIGILCRPSAQEVYTFTVGYHELTGSKVPLKKPLLVLKKKRCVDEDQNNDTKSANAELEVI
        M+IKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNL+IGILCRPSAQEVYTFTVGYHELTGSK+ LKKPLLVLKK R VDEDQ++DTKS NAELEVI
Subjt:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLQIGILCRPSAQEVYTFTVGYHELTGSKVPLKKPLLVLKKKRCVDEDQNNDTKSANAELEVI

Query:  GIIRQRILFKTRPKALISKPQPLVKERSRASGTVVSGQTT
        GIIRQRILFKTRPKALISKPQPLVKERSRASG+ V+GQTT
Subjt:  GIIRQRILFKTRPKALISKPQPLVKERSRASGTVVSGQTT

A0A1S3CT18 Uncharacterized protein

1.6e-63

89.29

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Query:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLQIGILCRPSAQEVYTFTVGYHELTGSKVPLKKPLLVLKKKRCVDEDQNNDTKSANAELEVI
        MQIKLKCNCGETKCLEWAVVELQGVVE QSTFQDR+QNL+IGILCRPSAQE+YTFTVGYHELTGSKV LKKPLLVLKK R VDEDQ++D KS NAELEVI
Subjt:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLQIGILCRPSAQEVYTFTVGYHELTGSKVPLKKPLLVLKKKRCVDEDQNNDTKSANAELEVI

Query:  GIIRQRILFKTRPKALISKPQPLVKERSRASGTVVSGQTT
        GIIRQRILFKTRPKALISKP+PLVKERSRASG+ V GQTT
Subjt:  GIIRQRILFKTRPKALISKPQPLVKERSRASGTVVSGQTT

A0A5A7UJ36 Uncharacterized protein

3.1e-64

89.29

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Query:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLQIGILCRPSAQEVYTFTVGYHELTGSKVPLKKPLLVLKKKRCVDEDQNNDTKSANAELEVI
        MQIKLKCNCGETKCLEWA+VELQGVVEPQSTFQDR+QNL+IGILCRPSAQE+YTFTVGYHELTGSKV LKKPLLVLKK R VDEDQ++D KS NAELEVI
Subjt:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLQIGILCRPSAQEVYTFTVGYHELTGSKVPLKKPLLVLKKKRCVDEDQNNDTKSANAELEVI

Query:  GIIRQRILFKTRPKALISKPQPLVKERSRASGTVVSGQTT
        GIIRQRILFKTRPKALISKP+PLVKERSRASG+ V GQTT
Subjt:  GIIRQRILFKTRPKALISKPQPLVKERSRASGTVVSGQTT

A0A5D3BQB7 Uncharacterized protein

1.6e-63

89.29

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Query:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLQIGILCRPSAQEVYTFTVGYHELTGSKVPLKKPLLVLKKKRCVDEDQNNDTKSANAELEVI
        MQIKLKCNCGETKCLEWAVVELQGVVE QSTFQDR+QNL+IGILCRPSAQE+YTFTVGYHELTGSKV LKKPLLVLKK R VDEDQ++D KS NAELEVI
Subjt:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLQIGILCRPSAQEVYTFTVGYHELTGSKVPLKKPLLVLKKKRCVDEDQNNDTKSANAELEVI

Query:  GIIRQRILFKTRPKALISKPQPLVKERSRASGTVVSGQTT
        GIIRQRILFKTRPKALISKP+PLVKERSRASG+ V GQTT
Subjt:  GIIRQRILFKTRPKALISKPQPLVKERSRASGTVVSGQTT

A0A6J1I4S6 Uncharacterized protein

3.5e-63

86.43

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Query:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLQIGILCRPSAQEVYTFTVGYHELTGSKVPLKKPLLVLKKKRCVDEDQNNDTKSANAELEVI
        MQIK+KCNCGETKCLEWAVVELQG+VE Q +F+DR Q L+IG+LCRPSAQEVYTFTVGYHELTGSKVPLKKPLLVLKKK+CVDEDQ+ DTKSA AELEVI
Subjt:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLQIGILCRPSAQEVYTFTVGYHELTGSKVPLKKPLLVLKKKRCVDEDQNNDTKSANAELEVI

Query:  GIIRQRILFKTRPKALISKPQPLVKERSRASGTVVSGQTT
        GIIRQR LFKTRPKALISKPQP VKERSRASG+ V+GQTT
Subjt:  GIIRQRILFKTRPKALISKPQPLVKERSRASGTVVSGQTT

SwissProt top hits

e value

%identity

Alignment

P0C6T1 Chromosome transmission fidelity protein 8 homolog

1.7e-06

32.04

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Query:  EWAVVELQGVVEPQSTFQDRLQNLQIGILCRPSAQEVYTFTVGYHELTGSKVPLKKPLLVLKKKRCVDEDQNNDTKSANAELEVIGIIRQRILFKTRPKA
        EW ++ELQG +E  + +   L    +G L   + + +    VG+H L G  + L+KP  VL K     +D +   +    +  V  +I+ +ILFKTRPK 
Subjt:  EWAVVELQGVVEPQSTFQDRLQNLQIGILCRPSAQEVYTFTVGYHELTGSKVPLKKPLLVLKKKRCVDEDQNNDTKSANAELEVIGIIRQRILFKTRPKA

Query:  LIS
        +I+
Subjt:  LIS

P0CG11 Chromosome transmission fidelity protein 8 homolog

8.3e-06

32.04

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Query:  EWAVVELQGVVEPQSTFQDRLQNLQIGILCRPSAQEVYTFTVGYHELTGSKVPLKKPLLVLKKKRCVDEDQNNDTKSANAELEVIGIIRQRILFKTRPKA
        EW ++ELQG +E + +    L    +G L   + + +    VG+H L G  + L+KP  VL K    ++D +     +     V  +I+ +ILFKTRPK 
Subjt:  EWAVVELQGVVEPQSTFQDRLQNLQIGILCRPSAQEVYTFTVGYHELTGSKVPLKKPLLVLKKKRCVDEDQNNDTKSANAELEVIGIIRQRILFKTRPKA

Query:  LIS
        +I+
Subjt:  LIS

P0CG13 Chromosome transmission fidelity protein 8 homolog

4.4e-07

33.01

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Query:  EWAVVELQGVVEPQSTFQDRLQNLQIGILCRPSAQEVYTFTVGYHELTGSKVPLKKPLLVLKKKRCVDEDQNNDTKSANAELEVIGIIRQRILFKTRPKA
        EW ++ELQG +E  + +   L    +G L   + + +    VG+H L G  + L+KP  VL K    D+D +   +       V  +I+ +ILFKTRPK 
Subjt:  EWAVVELQGVVEPQSTFQDRLQNLQIGILCRPSAQEVYTFTVGYHELTGSKVPLKKPLLVLKKKRCVDEDQNNDTKSANAELEVIGIIRQRILFKTRPKA

Query:  LIS
        +I+
Subjt:  LIS

P0CG15 Chromosome transmission fidelity protein 8 homolog

4.4e-07

32.04

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Query:  EWAVVELQGVVEPQSTFQDRLQNLQIGILCRPSAQEVYTFTVGYHELTGSKVPLKKPLLVLKKKRCVDEDQNNDTKSANAELEVIGIIRQRILFKTRPKA
        EW ++ELQG +E  + +   L    +G L   + + +    VG+H L G  + L+KP  VL K     +D +   +    +  V  +I+ +ILFKTRPK 
Subjt:  EWAVVELQGVVEPQSTFQDRLQNLQIGILCRPSAQEVYTFTVGYHELTGSKVPLKKPLLVLKKKRCVDEDQNNDTKSANAELEVIGIIRQRILFKTRPKA

Query:  LIS
        +I+
Subjt:  LIS

Q54JL4 Putative uncharacterized protein DDB_G0287975

1.1e-10

35.61

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Query:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLQIGILC-RPSAQEVYTFTVGYHELTGSKVPLKKPLLVLKK-------------KRCVDEDQ
        MQI +K     T   EW +++LQG +E    +   L+N  +GIL  +P+ ++ ++F +G   L G +VPLKKPLLV+KK             K  VD   
Subjt:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLQIGILC-RPSAQEVYTFTVGYHELTGSKVPLKKPLLVLKK-------------KRCVDEDQ

Query:  NNDT-KSANAELEVIGIIRQRILFKTRPKALI
        N D  K    E  + GI   +I F TRP   I
Subjt:  NNDT-KSANAELEVIGIIRQRILFKTRPKALI

Arabidopsis top hits

e value

%identity

Alignment

AT5G52220.1 CONTAINS InterPro DOMAIN/s: Chromosome transmission fidelity protein 8 (InterPro:IPR018607); Has 127 Blast hits to 127 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 70; Fungi - 17; Plants - 31; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).

2.3e-35

63.03

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Query:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLQIGILCR-PSAQEVYTFTVGYHELTGSKVPLKKPLLVLKKKRCVDEDQNNDTKSANAELEV
        M+I++KC CGE +C EWA+VELQGVVE Q++FQ  +QNL+IG LC   S+Q  YTFTVGYHEL GSKV LKKPLLVLKK       Q ++      ELEV
Subjt:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLQIGILCR-PSAQEVYTFTVGYHELTGSKVPLKKPLLVLKKKRCVDEDQNNDTKSANAELEV

Query:  IGIIRQRILFKTRPKALIS
        +GIIR +ILFKTRPK LIS
Subjt:  IGIIRQRILFKTRPKALIS

AT5G52220.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chromosome transmission fidelity protein 8 (InterPro:IPR018607).

2.3e-35

63.03

Show/hide

Query:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLQIGILCR-PSAQEVYTFTVGYHELTGSKVPLKKPLLVLKKKRCVDEDQNNDTKSANAELEV
        M+I++KC CGE +C EWA+VELQGVVE Q++FQ  +QNL+IG LC   S+Q  YTFTVGYHEL GSKV LKKPLLVLKK       Q ++      ELEV
Subjt:  MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLQIGILCR-PSAQEVYTFTVGYHELTGSKVPLKKPLLVLKKKRCVDEDQNNDTKSANAELEV

Query:  IGIIRQRILFKTRPKALIS
        +GIIR +ILFKTRPK LIS
Subjt:  IGIIRQRILFKTRPKALIS

Sequences

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CDS sequence

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ATGCAGATTAAGTTGAAATGTAACTGTGGCGAAACCAAATGCTTGGAATGGGCCGTCGTTGAGTTGCAAGGCGTAGTTGAACCTCAATCCACCTTCCAAGATCGCCTTCA
AAACCTCCAAATCGGCATTCTATGTCGCCCCTCCGCTCAGGAAGTGTATACTTTTACGGTAGGATACCATGAGCTGACAGGAAGCAAAGTGCCTCTGAAGAAGCCATTGT
TGGTGTTGAAGAAAAAGAGGTGCGTGGATGAGGATCAGAATAACGATACCAAATCGGCTAATGCGGAGTTGGAAGTTATTGGTATAATCAGGCAGCGGATTCTGTTTAAG
ACTAGACCAAAGGCTCTCATATCTAAACCACAGCCATTGGTAAAGGAAAGATCCCGAGCTTCAGGAACTGTAGTGTCAGGCCAAACAACATGA

mRNA sequence

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Protein sequence

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MQIKLKCNCGETKCLEWAVVELQGVVEPQSTFQDRLQNLQIGILCRPSAQEVYTFTVGYHELTGSKVPLKKPLLVLKKKRCVDEDQNNDTKSANAELEVIGIIRQRILFK
TRPKALISKPQPLVKERSRASGTVVSGQTT

HG10009449 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome