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HG10009477 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10009477
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCLAVATA3/ESR (CLE)-related protein 12
Genome locationChr06:6416232..6416489
RNA-Seq ExpressionHG10009477
SyntenyHG10009477
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR039618 - CLAVATA3/ESR (CLE)-related protein 9/10/11/12/13


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601759.1 CLAVATA3/ESR (CLE)-related protein 12, partial [Cucurbita argyrosperma subsp. sororia]1.6e-2068.97Show/hide
Query:  MNHKPTPIITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPQRRPNRPPKHSRPTDTNDQPSPA--DIDPRYGVEKRRVPTGPNPLHH
        MN K  P ITFSY  SSSSNHPL TRK L SKVDFTPFFP  +PNRP KHSRP    + P  A  D+DP YGVEKRRVP GPNPLH+
Subjt:  MNHKPTPIITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPQRRPNRPPKHSRPTDTNDQPSPA--DIDPRYGVEKRRVPTGPNPLHH

KAG7032483.1 CLAVATA3/ESR (CLE)-related protein 12, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-2068.97Show/hide
Query:  MNHKPTPIITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPQRRPNRPPKHSRPTDTNDQPSPA--DIDPRYGVEKRRVPTGPNPLHH
        MN K  P ITFSY  SSSSNHPL TRK L SKVDFTPFFP  +PNRP KHSRP    + P  A  D+DP YGVEKRRVP GPNPLH+
Subjt:  MNHKPTPIITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPQRRPNRPPKHSRPTDTNDQPSPA--DIDPRYGVEKRRVPTGPNPLHH

RVW45565.1 CLAVATA3/ESR (CLE)-related protein 12 [Vitis vinifera]1.6e-1261.54Show/hide
Query:  YSSSSSSNHPLITRKVLTSKVDFTPFFPQR---RPNRPPKHSRPTDTNDQPSPA--DIDPRYGVEKRRVPTGPNPLHH
        YSSSS S  P I+RKVL+SK DFTPF  QR   R +   +H R  +   QP PA  +IDPRYGVEKR VPTGPNPLHH
Subjt:  YSSSSSSNHPLITRKVLTSKVDFTPFFPQR---RPNRPPKHSRPTDTNDQPSPA--DIDPRYGVEKRRVPTGPNPLHH

RVW65127.1 CLAVATA3/ESR (CLE)-related protein 13 [Vitis vinifera]7.0e-1358.89Show/hide
Query:  NHKPTPIITFSYSSSSS-SNHPLITRKVLTSKVDFTPFFPQR---RPNRPPKHSRPTDTNDQPSPA--DIDPRYGVEKRRVPTGPNPLHH
        N KP  I  +S SSSSS S  P I+RKVL+SK DFTPF  QR   R +   +H R  +   QP PA  +IDPRYGVEKR VPTGPNPLHH
Subjt:  NHKPTPIITFSYSSSSS-SNHPLITRKVLTSKVDFTPFFPQR---RPNRPPKHSRPTDTNDQPSPA--DIDPRYGVEKRRVPTGPNPLHH

XP_010648002.1 PREDICTED: CLAVATA3/ESR (CLE)-related protein 12 [Vitis vinifera]1.6e-1261.54Show/hide
Query:  YSSSSSSNHPLITRKVLTSKVDFTPFFPQR---RPNRPPKHSRPTDTNDQPSPA--DIDPRYGVEKRRVPTGPNPLHH
        YSSSS S  P I+RKVL+SK DFTPF  QR   R +   +H R  +   QP PA  +IDPRYGVEKR VPTGPNPLHH
Subjt:  YSSSSSSNHPLITRKVLTSKVDFTPFFPQR---RPNRPPKHSRPTDTNDQPSPA--DIDPRYGVEKRRVPTGPNPLHH

TrEMBL top hitse value%identityAlignment
A0A0A0KPQ3 Uncharacterized protein3.6e-3182.76Show/hide
Query:  MNHKPTPIITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPQRRPNRPPKHSRPTDTN--DQPSPADIDPRYGVEKRRVPTGPNPLHH
        MNH+PTP ITFSY  SSSSNHPLITRKVLTSKVDFTPFF  R PN+P KHS PTDTN  D+P+P+DIDPRYGVEKRRVPTGPNPLHH
Subjt:  MNHKPTPIITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPQRRPNRPPKHSRPTDTN--DQPSPADIDPRYGVEKRRVPTGPNPLHH

A0A2N9J7P0 Uncharacterized protein2.4e-1462.65Show/hide
Query:  IITFSYSSSSSSNHPLITRKVLTSKVDFTPFFP--QRRPNRPPKHS-RPTDTNDQPSPA--DIDPRYGVEKRRVPTGPNPLHH
        I T +YSS S  +HPLITRKVL SK DFTPF    Q+R  +   HS R  + + QP PA  +IDPRYGVEKRRVPTGPNPLHH
Subjt:  IITFSYSSSSSSNHPLITRKVLTSKVDFTPFFP--QRRPNRPPKHS-RPTDTNDQPSPA--DIDPRYGVEKRRVPTGPNPLHH

A0A438ECN4 CLAVATA3/ESR (CLE)-related protein 127.6e-1361.54Show/hide
Query:  YSSSSSSNHPLITRKVLTSKVDFTPFFPQR---RPNRPPKHSRPTDTNDQPSPA--DIDPRYGVEKRRVPTGPNPLHH
        YSSSS S  P I+RKVL+SK DFTPF  QR   R +   +H R  +   QP PA  +IDPRYGVEKR VPTGPNPLHH
Subjt:  YSSSSSSNHPLITRKVLTSKVDFTPFFPQR---RPNRPPKHSRPTDTNDQPSPA--DIDPRYGVEKRRVPTGPNPLHH

A0A438FYU5 CLAVATA3/ESR (CLE)-related protein 133.4e-1358.89Show/hide
Query:  NHKPTPIITFSYSSSSS-SNHPLITRKVLTSKVDFTPFFPQR---RPNRPPKHSRPTDTNDQPSPA--DIDPRYGVEKRRVPTGPNPLHH
        N KP  I  +S SSSSS S  P I+RKVL+SK DFTPF  QR   R +   +H R  +   QP PA  +IDPRYGVEKR VPTGPNPLHH
Subjt:  NHKPTPIITFSYSSSSS-SNHPLITRKVLTSKVDFTPFFPQR---RPNRPPKHSRPTDTNDQPSPA--DIDPRYGVEKRRVPTGPNPLHH

A5B735 Uncharacterized protein7.6e-1361.54Show/hide
Query:  YSSSSSSNHPLITRKVLTSKVDFTPFFPQR---RPNRPPKHSRPTDTNDQPSPA--DIDPRYGVEKRRVPTGPNPLHH
        YSSSS S  P I+RKVL+SK DFTPF  QR   R +   +H R  +   QP PA  +IDPRYGVEKR VPTGPNPLHH
Subjt:  YSSSSSSNHPLITRKVLTSKVDFTPFFPQR---RPNRPPKHSRPTDTNDQPSPA--DIDPRYGVEKRRVPTGPNPLHH

SwissProt top hitse value%identityAlignment
A2X462 Protein FON2 SPARE13.6e-0477.27Show/hide
Query:  DIDPRYGVEKRRVPTGPNPLHH
        ++DPR+GV+KR VPTGPNPLHH
Subjt:  DIDPRYGVEKRRVPTGPNPLHH

Q29PU4 CLAVATA3/ESR (CLE)-related protein 122.2e-0951.52Show/hide
Query:  NHPLITRKVLTSKVDFTPFFPQRRPNRPPKHSRPTDTNDQPSPADIDPRYGVEKRRVPTGPNPLHH
        ++ L++RKVL+ + DFTPF    R N    H     + +Q    +IDPRYGVEKRRVP+GPNPLHH
Subjt:  NHPLITRKVLTSKVDFTPFFPQRRPNRPPKHSRPTDTNDQPSPADIDPRYGVEKRRVPTGPNPLHH

Q6NMF0 CLAVATA3/ESR (CLE)-related protein 137.3e-0539.53Show/hide
Query:  MNHKPTPIITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPQ-RRPNRPPKHSRPTDTNDQPSPADIDPRYGVEKRRVPTGPNPLHH
        +N  P+P+IT               R +     DFTPF    RR N   + + P         ++IDPRYGVEKR VP+GPNPLHH
Subjt:  MNHKPTPIITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPQ-RRPNRPPKHSRPTDTNDQPSPADIDPRYGVEKRRVPTGPNPLHH

Q6Z6T2 Inactive protein FON2 SPARE13.6e-0477.27Show/hide
Query:  DIDPRYGVEKRRVPTGPNPLHH
        ++DPR+GV+KR VPTGPNPLHH
Subjt:  DIDPRYGVEKRRVPTGPNPLHH

Q9FZE4 CLAVATA3/ESR (CLE)-related protein 91.6e-0473.08Show/hide
Query:  PSPADIDPRYGVEKRRVPTGPNPLHH
        P P +IDPRYGV+KR VP+GPNPLH+
Subjt:  PSPADIDPRYGVEKRRVPTGPNPLHH

Arabidopsis top hitse value%identityAlignment
AT1G26600.1 CLAVATA3/ESR-RELATED 91.2e-0573.08Show/hide
Query:  PSPADIDPRYGVEKRRVPTGPNPLHH
        P P +IDPRYGV+KR VP+GPNPLH+
Subjt:  PSPADIDPRYGVEKRRVPTGPNPLHH

AT1G68795.1 CLAVATA3/ESR-RELATED 121.6e-1051.52Show/hide
Query:  NHPLITRKVLTSKVDFTPFFPQRRPNRPPKHSRPTDTNDQPSPADIDPRYGVEKRRVPTGPNPLHH
        ++ L++RKVL+ + DFTPF    R N    H     + +Q    +IDPRYGVEKRRVP+GPNPLHH
Subjt:  NHPLITRKVLTSKVDFTPFFPQRRPNRPPKHSRPTDTNDQPSPADIDPRYGVEKRRVPTGPNPLHH

AT1G69320.1 CLAVATA3/ESR-RELATED 104.4e-0555.81Show/hide
Query:  RPNRPPKHSRPTDTNDQPSPADIDPRYGVEKRRVPTGPNPLHH
        R +R P  S P      P P +ID RYGVEKR VP+GPNPLH+
Subjt:  RPNRPPKHSRPTDTNDQPSPADIDPRYGVEKRRVPTGPNPLHH

AT1G73965.1 CLAVATA3/ESR-RELATED 135.2e-0639.53Show/hide
Query:  MNHKPTPIITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPQ-RRPNRPPKHSRPTDTNDQPSPADIDPRYGVEKRRVPTGPNPLHH
        +N  P+P+IT               R +     DFTPF    RR N   + + P         ++IDPRYGVEKR VP+GPNPLHH
Subjt:  MNHKPTPIITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPQ-RRPNRPPKHSRPTDTNDQPSPADIDPRYGVEKRRVPTGPNPLHH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCACAAACCAACACCAATCATCACATTTTCCTATTCTTCTTCTTCCTCCTCCAACCATCCATTGATAACAAGGAAGGTACTAACCAGCAAGGTAGACTTCACCCC
CTTTTTCCCACAGCGCCGGCCGAATCGACCACCGAAGCATTCTCGCCCCACCGACACCAACGACCAACCATCCCCCGCCGACATCGATCCTCGGTACGGCGTTGAGAAGC
GACGAGTCCCTACCGGTCCAAATCCATTGCACCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATCACAAACCAACACCAATCATCACATTTTCCTATTCTTCTTCTTCCTCCTCCAACCATCCATTGATAACAAGGAAGGTACTAACCAGCAAGGTAGACTTCACCCC
CTTTTTCCCACAGCGCCGGCCGAATCGACCACCGAAGCATTCTCGCCCCACCGACACCAACGACCAACCATCCCCCGCCGACATCGATCCTCGGTACGGCGTTGAGAAGC
GACGAGTCCCTACCGGTCCAAATCCATTGCACCATTGA
Protein sequenceShow/hide protein sequence
MNHKPTPIITFSYSSSSSSNHPLITRKVLTSKVDFTPFFPQRRPNRPPKHSRPTDTNDQPSPADIDPRYGVEKRRVPTGPNPLHH