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HG10009483 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10009483
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionprotein CROWDED NUCLEI 3
Genome locationChr06:6468430..6468886
RNA-Seq ExpressionHG10009483
SyntenyHG10009483
Gene Ontology termsGO:0006997 - nucleus organization (biological process)
GO:0005652 - nuclear lamina (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK00276.1 protein CROWDED NUCLEI 3 [Cucumis melo var. makuwa]5.6e-3682.41Show/hide
Query:  MEKEN-EGTPSVDGEKGGKMDSVQITTVRTVYRSEDRVVQFESQRTAEDNTSMEKLV--TVDDLHDEANGSADYEDEDQSILDDEDEYDEEQPDVGSIGK
        MEKEN E TP+V GE G KMDSV+ITTVRT+Y SEDRVV+FESQRTAEDN  MEKLV  TV+DL  EANGS++YEDEDQSILDDEDEYDEEQPDVGSIGK
Subjt:  MEKEN-EGTPSVDGEKGGKMDSVQITTVRTVYRSEDRVVQFESQRTAEDNTSMEKLV--TVDDLHDEANGSADYEDEDQSILDDEDEYDEEQPDVGSIGK

Query:  KIWTFFTT
        KIWTFFTT
Subjt:  KIWTFFTT

XP_004147138.1 protein CROWDED NUCLEI 3 [Cucumis sativus]5.6e-3682.08Show/hide
Query:  MEKENEGTPSVDGEKGGKMDSVQITTVRTVYRSEDRVVQFESQRTAEDNTSMEKLV-TVDDLHDEANGSADYEDEDQSILDDEDEYDEEQPDVGSIGKKI
        MEKENE T +V GE G KMDSV+ITTVRT+Y SEDRVV+FESQRTAEDN   EKLV TV+DL DE NGS++YEDEDQSILDDEDEYDEEQPDVGSIGKKI
Subjt:  MEKENEGTPSVDGEKGGKMDSVQITTVRTVYRSEDRVVQFESQRTAEDNTSMEKLV-TVDDLHDEANGSADYEDEDQSILDDEDEYDEEQPDVGSIGKKI

Query:  WTFFTT
        WTFFTT
Subjt:  WTFFTT

XP_008467201.1 PREDICTED: protein CROWDED NUCLEI 3 [Cucumis melo]5.6e-3682.41Show/hide
Query:  MEKEN-EGTPSVDGEKGGKMDSVQITTVRTVYRSEDRVVQFESQRTAEDNTSMEKLV--TVDDLHDEANGSADYEDEDQSILDDEDEYDEEQPDVGSIGK
        MEKEN E TP+V GE G KMDSV+ITTVRT+Y SEDRVV+FESQRTAEDN  MEKLV  TV+DL  EANGS++YEDEDQSILDDEDEYDEEQPDVGSIGK
Subjt:  MEKEN-EGTPSVDGEKGGKMDSVQITTVRTVYRSEDRVVQFESQRTAEDNTSMEKLV--TVDDLHDEANGSADYEDEDQSILDDEDEYDEEQPDVGSIGK

Query:  KIWTFFTT
        KIWTFFTT
Subjt:  KIWTFFTT

XP_038907101.1 protein CROWDED NUCLEI 1 isoform X1 [Benincasa hispida]1.1e-3988.57Show/hide
Query:  MEKENEGTPSVDGEKGGKMDSVQITTVRTVYRSEDRVVQFESQRTAEDNTSMEKLVTVDDLHDEANGSADYEDEDQSILDDEDEYDEEQPDVGSIGKKIW
        MEKENEGTPSV GE   +MDSVQITTVRT+YRSEDRVVQFESQRTA+D+TSMEKLVTVD+L DEANGSA+YEDEDQSILDDEDEYD EQPDVGSIGKKIW
Subjt:  MEKENEGTPSVDGEKGGKMDSVQITTVRTVYRSEDRVVQFESQRTAEDNTSMEKLVTVDDLHDEANGSADYEDEDQSILDDEDEYDEEQPDVGSIGKKIW

Query:  TFFTT
        TFFTT
Subjt:  TFFTT

XP_038907102.1 protein CROWDED NUCLEI 1 isoform X2 [Benincasa hispida]9.5e-3684.76Show/hide
Query:  MEKENEGTPSVDGEKGGKMDSVQITTVRTVYRSEDRVVQFESQRTAEDNTSMEKLVTVDDLHDEANGSADYEDEDQSILDDEDEYDEEQPDVGSIGKKIW
        MEKENEGTPSV GE   +MDSVQITTVRT+YRSEDRVV    QRTA+D+TSMEKLVTVD+L DEANGSA+YEDEDQSILDDEDEYD EQPDVGSIGKKIW
Subjt:  MEKENEGTPSVDGEKGGKMDSVQITTVRTVYRSEDRVVQFESQRTAEDNTSMEKLVTVDDLHDEANGSADYEDEDQSILDDEDEYDEEQPDVGSIGKKIW

Query:  TFFTT
        TFFTT
Subjt:  TFFTT

TrEMBL top hitse value%identityAlignment
A0A0A0KRQ7 Uncharacterized protein2.7e-3682.08Show/hide
Query:  MEKENEGTPSVDGEKGGKMDSVQITTVRTVYRSEDRVVQFESQRTAEDNTSMEKLV-TVDDLHDEANGSADYEDEDQSILDDEDEYDEEQPDVGSIGKKI
        MEKENE T +V GE G KMDSV+ITTVRT+Y SEDRVV+FESQRTAEDN   EKLV TV+DL DE NGS++YEDEDQSILDDEDEYDEEQPDVGSIGKKI
Subjt:  MEKENEGTPSVDGEKGGKMDSVQITTVRTVYRSEDRVVQFESQRTAEDNTSMEKLV-TVDDLHDEANGSADYEDEDQSILDDEDEYDEEQPDVGSIGKKI

Query:  WTFFTT
        WTFFTT
Subjt:  WTFFTT

A0A1S3CSZ3 protein CROWDED NUCLEI 32.7e-3682.41Show/hide
Query:  MEKEN-EGTPSVDGEKGGKMDSVQITTVRTVYRSEDRVVQFESQRTAEDNTSMEKLV--TVDDLHDEANGSADYEDEDQSILDDEDEYDEEQPDVGSIGK
        MEKEN E TP+V GE G KMDSV+ITTVRT+Y SEDRVV+FESQRTAEDN  MEKLV  TV+DL  EANGS++YEDEDQSILDDEDEYDEEQPDVGSIGK
Subjt:  MEKEN-EGTPSVDGEKGGKMDSVQITTVRTVYRSEDRVVQFESQRTAEDNTSMEKLV--TVDDLHDEANGSADYEDEDQSILDDEDEYDEEQPDVGSIGK

Query:  KIWTFFTT
        KIWTFFTT
Subjt:  KIWTFFTT

A0A5D3BPV3 Protein CROWDED NUCLEI 32.7e-3682.41Show/hide
Query:  MEKEN-EGTPSVDGEKGGKMDSVQITTVRTVYRSEDRVVQFESQRTAEDNTSMEKLV--TVDDLHDEANGSADYEDEDQSILDDEDEYDEEQPDVGSIGK
        MEKEN E TP+V GE G KMDSV+ITTVRT+Y SEDRVV+FESQRTAEDN  MEKLV  TV+DL  EANGS++YEDEDQSILDDEDEYDEEQPDVGSIGK
Subjt:  MEKEN-EGTPSVDGEKGGKMDSVQITTVRTVYRSEDRVVQFESQRTAEDNTSMEKLV--TVDDLHDEANGSADYEDEDQSILDDEDEYDEEQPDVGSIGK

Query:  KIWTFFTT
        KIWTFFTT
Subjt:  KIWTFFTT

A0A6J1JUG6 protein CROWDED NUCLEI 1-like isoform X26.0e-2874.23Show/hide
Query:  SVDGEKGGKMDSVQITTVRTVYRSEDRVVQFESQRTAEDNTSMEKLVTVDDLHDEANGSADYEDEDQSILDD-EDEYDEEQPDVGSIGKKIWTFFTT
        SVDGE   K D VQ+TTVRT+YRSEDRVVQFES R  EDN SMEKLV +DDL DE N +++YEDED +I+DD EDEYDEEQPD  SIGKKIWTFFTT
Subjt:  SVDGEKGGKMDSVQITTVRTVYRSEDRVVQFESQRTAEDNTSMEKLVTVDDLHDEANGSADYEDEDQSILDD-EDEYDEEQPDVGSIGKKIWTFFTT

A0A6J1K004 protein CROWDED NUCLEI 1-like isoform X16.0e-2874.23Show/hide
Query:  SVDGEKGGKMDSVQITTVRTVYRSEDRVVQFESQRTAEDNTSMEKLVTVDDLHDEANGSADYEDEDQSILDD-EDEYDEEQPDVGSIGKKIWTFFTT
        SVDGE   K D VQ+TTVRT+YRSEDRVVQFES R  EDN SMEKLV +DDL DE N +++YEDED +I+DD EDEYDEEQPD  SIGKKIWTFFTT
Subjt:  SVDGEKGGKMDSVQITTVRTVYRSEDRVVQFESQRTAEDNTSMEKLVTVDDLHDEANGSADYEDEDQSILDD-EDEYDEEQPDVGSIGKKIWTFFTT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAAGAAAACGAAGGAACTCCTAGTGTTGATGGTGAAAAAGGGGGAAAAATGGACTCTGTGCAGATTACAACAGTCAGAACTGTATATCGTTCTGAGGATAGAGT
AGTTCAGTTTGAATCGCAAAGAACGGCTGAAGATAATACTTCCATGGAGAAGCTGGTTACAGTCGATGATTTGCACGATGAAGCGAATGGTTCAGCAGACTATGAAGATG
AAGATCAAAGCATACTCGATGATGAAGACGAGTACGATGAAGAGCAGCCTGACGTGGGATCAATTGGAAAGAAGATTTGGACCTTTTTCACAACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAAGAAAACGAAGGAACTCCTAGTGTTGATGGTGAAAAAGGGGGAAAAATGGACTCTGTGCAGATTACAACAGTCAGAACTGTATATCGTTCTGAGGATAGAGT
AGTTCAGTTTGAATCGCAAAGAACGGCTGAAGATAATACTTCCATGGAGAAGCTGGTTACAGTCGATGATTTGCACGATGAAGCGAATGGTTCAGCAGACTATGAAGATG
AAGATCAAAGCATACTCGATGATGAAGACGAGTACGATGAAGAGCAGCCTGACGTGGGATCAATTGGAAAGAAGATTTGGACCTTTTTCACAACTTAG
Protein sequenceShow/hide protein sequence
MEKENEGTPSVDGEKGGKMDSVQITTVRTVYRSEDRVVQFESQRTAEDNTSMEKLVTVDDLHDEANGSADYEDEDQSILDDEDEYDEEQPDVGSIGKKIWTFFTT