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HG10009539 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10009539
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionconserved peptide upstream open reading frame 28
Genome locationChr06:7194172..7194324
RNA-Seq ExpressionHG10009539
SyntenyHG10009539
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579252.1 hypothetical protein SDJN03_23700, partial [Cucurbita argyrosperma subsp. sororia]1.3e-1197.56Show/hide
Query:  MVEENSSSSNYMRSLLDSRASARLPLSAASSFAFGSCKEGW
        MVEENS SSNYMRSLLDSRASARLPLSAASSFAFGSCKEGW
Subjt:  MVEENSSSSNYMRSLLDSRASARLPLSAASSFAFGSCKEGW
KAG7032577.1 hypothetical protein SDJN02_06626, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-1695.83Show/hide
Query:  MVEENSSSSNYMRSLLDSRASARLPLSAASSFAFGSCKEGWYYRCLGV
        MVEENSSSSNYMRSLLDSRASARLPLSA SSFAFGSCKEGWYYRCLG+
Subjt:  MVEENSSSSNYMRSLLDSRASARLPLSAASSFAFGSCKEGWYYRCLGV
XP_008467130.2 PREDICTED: uncharacterized protein LOC103504558 [Cucumis melo]8.6e-19100Show/hide
Query:  MVEENSSSSNYMRSLLDSRASARLPLSAASSFAFGSCKEGWYYRCLGVDP
        MVEENSSSSNYMRSLLDSRASARLPLSAASSFAFGSCKEGWYYRCLGVDP
Subjt:  MVEENSSSSNYMRSLLDSRASARLPLSAASSFAFGSCKEGWYYRCLGVDP
XP_016647517.1 PREDICTED: uncharacterized protein LOC107880498 [Prunus mume]3.5e-1286.36Show/hide
Query:  SSSNYMRSLLDSRASARLPLSAASSFAFGSCKEGWYYRCLGVDP
        S SN+MRSLL SRASA LP+SAAS+FAFGSCKEGWYYRCLGVDP
Subjt:  SSSNYMRSLLDSRASARLPLSAASSFAFGSCKEGWYYRCLGVDP
XP_017971818.1 PREDICTED: uncharacterized protein LOC108660978 [Theobroma cacao]1.3e-1176Show/hide
Query:  MVEENSSSSNYMRSLLDSRASARLPLSAASSFAFGSCKEGWYYRCLGVDP
        MVE   S SN+M SL  SRASA LP+SAAS+FAFGSCKEGWYYRCLG+DP
Subjt:  MVEENSSSSNYMRSLLDSRASARLPLSAASSFAFGSCKEGWYYRCLGVDP
TrEMBL top hitse value%identityAlignment
A0A1S3CSS9 uncharacterized protein LOC1035045584.2e-19100Show/hide
Query:  MVEENSSSSNYMRSLLDSRASARLPLSAASSFAFGSCKEGWYYRCLGVDP
        MVEENSSSSNYMRSLLDSRASARLPLSAASSFAFGSCKEGWYYRCLGVDP
Subjt:  MVEENSSSSNYMRSLLDSRASARLPLSAASSFAFGSCKEGWYYRCLGVDP
A0A251R6V3 Uncharacterized protein1.7e-1286.36Show/hide
Query:  SSSNYMRSLLDSRASARLPLSAASSFAFGSCKEGWYYRCLGVDP
        S SN+MRSLL SRASA LP+SAAS+FAFGSCKEGWYYRCLGVDP
Subjt:  SSSNYMRSLLDSRASARLPLSAASSFAFGSCKEGWYYRCLGVDP
A0A2P6R3E4 Uncharacterized protein4.6e-1077.78Show/hide
Query:  SSSNYMRSLLDSRASAR-LPLSAASSFAFGSCKEGWYYRCLGVDP
        S SN+MRS+  SRASA  LP+SAAS+F+FGSCKEGWYYRCLGVDP
Subjt:  SSSNYMRSLLDSRASAR-LPLSAASSFAFGSCKEGWYYRCLGVDP
A0A5D2MAG5 Uncharacterized protein7.9e-1074Show/hide
Query:  MVEENSSSSNYMRSLLDSRASARLPLSAASSFAFGSCKEGWYYRCLGVDP
        MVE   S S  M SL  SRAS  LPLSAAS+FAFGSCKEGWYYRCLG+DP
Subjt:  MVEENSSSSNYMRSLLDSRASARLPLSAASSFAFGSCKEGWYYRCLGVDP
A0A5D3E3V5 Senescence-associated protein3.2e-11100Show/hide
Query:  MVEENSSSSNYMRSLLDSRASARLPLSAASSFAFGSCKEG
        MVEENSSSSNYMRSLLDSRASARLPLSAASSFAFGSCKEG
Subjt:  MVEENSSSSNYMRSLLDSRASARLPLSAASSFAFGSCKEG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G23149.1 conserved peptide upstream open reading frame 296.6e-0954.9Show/hide
Query:  MVEENSSSSNYMRSLLDSRAS-ARLPLSAASSFAFGSCKEGWYYRCLGVDP
        MVE N    N+  +L   RAS   +PLS  S F+FGSCKEGWY+RC+G+DP
Subjt:  MVEENSSSSNYMRSLLDSRAS-ARLPLSAASSFAFGSCKEGWYYRCLGVDP
AT1G70782.1 conserved peptide upstream open reading frame 282.4e-1162Show/hide
Query:  MVEENSSSSNYMRSLLDSRASARLPLSAASSFAFGSCKEGWYYRCLGVDP
        MVE N     +  SL   RAS  LPLS +S FAFGSCKEGWY+RCLG+DP
Subjt:  MVEENSSSSNYMRSLLDSRASARLPLSAASSFAFGSCKEGWYYRCLGVDP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGAAGAAAATTCCAGTAGTAGTAATTACATGCGCTCCCTTTTGGATTCAAGGGCGAGCGCTCGTCTTCCTCTTTCTGCTGCTTCTTCTTTCGCTTTTGGTTCTTG
CAAGGAAGGCTGGTACTACCGCTGCCTTGGAGTTGACCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGAAGAAAATTCCAGTAGTAGTAATTACATGCGCTCCCTTTTGGATTCAAGGGCGAGCGCTCGTCTTCCTCTTTCTGCTGCTTCTTCTTTCGCTTTTGGTTCTTG
CAAGGAAGGCTGGTACTACCGCTGCCTTGGAGTTGACCCTTGA
Protein sequenceShow/hide protein sequence
MVEENSSSSNYMRSLLDSRASARLPLSAASSFAFGSCKEGWYYRCLGVDP