; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10009552 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10009552
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionDynein light chain
Genome locationChr06:7409096..7411164
RNA-Seq ExpressionHG10009552
SyntenyHG10009552
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150121.1 dynein light chain 1, cytoplasmic [Cucumis sativus]1.4e-6394.78Show/hide
Query:  MDVAEMELERRSKFLSGLILKKKAGEQQEQRDHLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSQRLALVLKKEFDSSYGPAWHCIVGTSFGSYVT
        MD AEMELERRSKFL+GLILKKKAGEQQEQRD LNVRVRASDM FPLQNRAFSCARELLDSMPGKLDS+RLAL LKKEFDSSYGPAWHCIVGTSFGSYVT
Subjt:  MDVAEMELERRSKFLSGLILKKKAGEQQEQRDHLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSQRLALVLKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD
        HSLGGFLYFSIDKVYILLFKTAVEPLSRG SLKD
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD

XP_022939677.1 dynein light chain LC6, flagellar outer arm [Cucurbita moschata]2.0e-6292.54Show/hide
Query:  MDVAEMELERRSKFLSGLILKKKAGEQQEQRDHLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSQRLALVLKKEFDSSYGPAWHCIVGTSFGSYVT
        M+ AEMELERR+KFL+GLILKKKAGE QE RD LNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDS+RLAL LKKEFDSSYGPAWHCIVGTSFGSYVT
Subjt:  MDVAEMELERRSKFLSGLILKKKAGEQQEQRDHLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSQRLALVLKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD
        HSLGGFLYFSIDKVYILLFKTAVEPLSRG SLKD
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD

XP_022973572.1 dynein light chain LC6, flagellar outer arm [Cucurbita maxima]1.2e-6292.54Show/hide
Query:  MDVAEMELERRSKFLSGLILKKKAGEQQEQRDHLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSQRLALVLKKEFDSSYGPAWHCIVGTSFGSYVT
        M+ AEMELERRSKFL+GLILKKKAGE QE RD LN+RVRASDMPFPLQNRAFSCARELLDSMPGKLDS+RLAL LKKEFDSSYGPAWHCIVGTSFGSYVT
Subjt:  MDVAEMELERRSKFLSGLILKKKAGEQQEQRDHLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSQRLALVLKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD
        HSLGGFLYFSIDKVYILLFKTAVEPLSRG SLKD
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD

XP_023551552.1 dynein light chain LC6, flagellar outer arm [Cucurbita pepo subsp. pepo]8.9e-6393.28Show/hide
Query:  MDVAEMELERRSKFLSGLILKKKAGEQQEQRDHLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSQRLALVLKKEFDSSYGPAWHCIVGTSFGSYVT
        M+ AEMELERRSKFL+GLILKKKAGE QE RD LNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDS+RLAL LKKEFDSSYGPAWHCIVGTSFGSYVT
Subjt:  MDVAEMELERRSKFLSGLILKKKAGEQQEQRDHLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSQRLALVLKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD
        HSLGGFLYFSIDKVYILLFKTAVEPLSRG SLKD
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD

XP_038906759.1 dynein light chain LC6, flagellar outer arm [Benincasa hispida]1.9e-6597.01Show/hide
Query:  MDVAEMELERRSKFLSGLILKKKAGEQQEQRDHLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSQRLALVLKKEFDSSYGPAWHCIVGTSFGSYVT
        MD AEMELERRSKFLSGLILKKKAGEQQEQRD LNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDS+RLAL LKKEFDSSYGPAWHCIVGTSFGSYVT
Subjt:  MDVAEMELERRSKFLSGLILKKKAGEQQEQRDHLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSQRLALVLKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD
        HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD

TrEMBL top hitse value%identityAlignment
A0A0A0KPF8 Dynein light chain6.7e-6494.78Show/hide
Query:  MDVAEMELERRSKFLSGLILKKKAGEQQEQRDHLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSQRLALVLKKEFDSSYGPAWHCIVGTSFGSYVT
        MD AEMELERRSKFL+GLILKKKAGEQQEQRD LNVRVRASDM FPLQNRAFSCARELLDSMPGKLDS+RLAL LKKEFDSSYGPAWHCIVGTSFGSYVT
Subjt:  MDVAEMELERRSKFLSGLILKKKAGEQQEQRDHLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSQRLALVLKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD
        HSLGGFLYFSIDKVYILLFKTAVEPLSRG SLKD
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD

A0A1S3CSY6 Dynein light chain6.7e-6494.78Show/hide
Query:  MDVAEMELERRSKFLSGLILKKKAGEQQEQRDHLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSQRLALVLKKEFDSSYGPAWHCIVGTSFGSYVT
        MD AEMELERRSKFL+GLILKKKAGEQQEQRD LNVRVRASDM FPLQNRAFSCARELLDSMPGKLDS+RLAL LKKEFDSSYGPAWHCIVGTSFGSYVT
Subjt:  MDVAEMELERRSKFLSGLILKKKAGEQQEQRDHLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSQRLALVLKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD
        HSLGGFLYFSIDKVYILLFKTAVEPLSRG SLKD
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD

A0A6J1CWZ8 Dynein light chain2.8e-6291.79Show/hide
Query:  MDVAEMELERRSKFLSGLILKKKAGEQQEQRDHLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSQRLALVLKKEFDSSYGPAWHCIVGTSFGSYVT
        M+ AEMELERRSKFL+GLI KKKA EQQE+RD LN+RVRASDMPFPLQNRAFSCARELLDSMPGKLDS+R AL LKKEFDSSYGPAWHCIVGTSFGSYVT
Subjt:  MDVAEMELERRSKFLSGLILKKKAGEQQEQRDHLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSQRLALVLKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD
        HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD

A0A6J1FHG9 Dynein light chain9.6e-6392.54Show/hide
Query:  MDVAEMELERRSKFLSGLILKKKAGEQQEQRDHLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSQRLALVLKKEFDSSYGPAWHCIVGTSFGSYVT
        M+ AEMELERR+KFL+GLILKKKAGE QE RD LNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDS+RLAL LKKEFDSSYGPAWHCIVGTSFGSYVT
Subjt:  MDVAEMELERRSKFLSGLILKKKAGEQQEQRDHLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSQRLALVLKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD
        HSLGGFLYFSIDKVYILLFKTAVEPLSRG SLKD
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD

A0A6J1I7W2 Dynein light chain5.7e-6392.54Show/hide
Query:  MDVAEMELERRSKFLSGLILKKKAGEQQEQRDHLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSQRLALVLKKEFDSSYGPAWHCIVGTSFGSYVT
        M+ AEMELERRSKFL+GLILKKKAGE QE RD LN+RVRASDMPFPLQNRAFSCARELLDSMPGKLDS+RLAL LKKEFDSSYGPAWHCIVGTSFGSYVT
Subjt:  MDVAEMELERRSKFLSGLILKKKAGEQQEQRDHLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSQRLALVLKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD
        HSLGGFLYFSIDKVYILLFKTAVEPLSRG SLKD
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSRGTSLKD

SwissProt top hitse value%identityAlignment
O02414 Dynein light chain LC6, flagellar outer arm9.4e-1545.24Show/hide
Query:  VRASDMPFPLQNRAFSCARELLDSMPGKLDSQRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT
        ++ +DMP  +Q  A  CA + L+    + D   +A  +KKEFD  Y P WHCIVG +FGSYVTH    F+YF + +V +LLFK+
Subjt:  VRASDMPFPLQNRAFSCARELLDSMPGKLDSQRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT

O96860 Dynein light chain 2, cytoplasmic8.0e-1445.24Show/hide
Query:  VRASDMPFPLQNRAFSCARELLDSMPGKLDSQRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT
        ++ +DM   +Q  A  CA + L+    + D   +A  +KKEFD  Y P WHCIVG +FGSYVTH    F+YF + +V ILLFK+
Subjt:  VRASDMPFPLQNRAFSCARELLDSMPGKLDSQRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT

Q22799 Dynein light chain 1, cytoplasmic6.1e-1445.24Show/hide
Query:  VRASDMPFPLQNRAFSCARELLDSMPGKLDSQRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT
        ++ +DM   +Q  A  CA + L+    + D   +A  +KKEFD  Y P WHCIVG +FGSYVTH    F+YF + +V ILLFK+
Subjt:  VRASDMPFPLQNRAFSCARELLDSMPGKLDSQRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT

Q24117 Dynein light chain 1, cytoplasmic8.0e-1445.24Show/hide
Query:  VRASDMPFPLQNRAFSCARELLDSMPGKLDSQRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT
        ++ +DM   +Q  A  CA + L+    + D   +A  +KKEFD  Y P WHCIVG +FGSYVTH    F+YF + +V ILLFK+
Subjt:  VRASDMPFPLQNRAFSCARELLDSMPGKLDSQRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKT

Q86A88 Dynein light chain, cytoplasmic1.2e-1444.71Show/hide
Query:  VRVRASDMPFPLQNRAFSCARELLDSMPGKLDSQRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFK
        + V+ +DMP  +Q  A  C  +  +    + D   +A+++KKEFD  Y P WHCIVG SFGS+VTH    F+YF+I+K  +LLFK
Subjt:  VRVRASDMPFPLQNRAFSCARELLDSMPGKLDSQRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFK

Arabidopsis top hitse value%identityAlignment
AT1G23220.1 Dynein light chain type 1 family protein2.2e-5175Show/hide
Query:  MDVAEMELERRSKFLSGLILKKKAGEQQEQRDHLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSQRLALVLKKEFDSSYGPAWHCIVGTSFGSYVT
        M+  E+ELERRSKFL+ LI KKKA EQQ+Q+D  NVRVRASDMP P QNRAFS +RE+L++ PGK D++RLA  LKK+FDS+YGPAWHCIVGTSFGSYVT
Subjt:  MDVAEMELERRSKFLSGLILKKKAGEQQEQRDHLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSQRLALVLKKEFDSSYGPAWHCIVGTSFGSYVT

Query:  HSLGGFLYFSIDKVYILLFKTAVEPLSR
        HS GGFLYF IDKVY+LLFKTAVEPL +
Subjt:  HSLGGFLYFSIDKVYILLFKTAVEPLSR

AT1G52240.2 RHO guanyl-nucleotide exchange factor 112.8e-1442.05Show/hide
Query:  VRASDMPFPLQNRAFSCARELLDSMPGKLDSQRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEP
        V  SDMP  +Q +A + A + LD +    D + +A  +KKEFD  YG  W C+VG++FG + THS G F+YF ++ +  L+FK A  P
Subjt:  VRASDMPFPLQNRAFSCARELLDSMPGKLDSQRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEP

AT3G16120.1 Dynein light chain type 1 family protein4.8e-1443.02Show/hide
Query:  RVRASDMPFPLQNRAFSCARELLDSMPGKLDSQRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTA
        +V  +DMP  +Q +A   A + LD +    DS  +A  +KKEFD  YG  W C+VGT+FG + THS G F+YF +  +  L+FK A
Subjt:  RVRASDMPFPLQNRAFSCARELLDSMPGKLDSQRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTA

AT4G27360.1 Dynein light chain type 1 family protein1.1e-1345.78Show/hide
Query:  SDMPFPLQNRAFSCARELLDSMPGKLDSQRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAV
        +DM   ++  A S A + LD      +  ++A  +KKEFD SYG  W CIVGT FGS+VTH  G F++FS+  + ILLFK +V
Subjt:  SDMPFPLQNRAFSCARELLDSMPGKLDSQRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAV

AT5G20110.1 Dynein light chain type 1 family protein4.5e-2862.77Show/hide
Query:  LNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSQRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLS
        L VR+ A+DMP  +Q  AF CAR  LDS+  K  S+ +A  LKKEFD  YGPAWHCIVG+SFGS+VTHS G F+YFS+DK+Y+LLFKT V P S
Subjt:  LNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSQRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFSIDKVYILLFKTAVEPLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTAGCGGAAATGGAGCTTGAGCGACGGAGCAAGTTTCTGAGTGGGCTTATTTTGAAGAAGAAGGCGGGGGAGCAGCAAGAGCAGCGTGATCATCTCAATGTTCG
CGTTAGAGCCTCCGATATGCCGTTTCCTCTGCAGAATCGCGCTTTTAGTTGCGCTCGTGAACTGCTCGATTCGATGCCTGGGAAGCTCGATAGCCAACGTCTTGCTCTTG
TCCTTAAAAAGGAATTTGATTCCTCCTATGGTCCGGCTTGGCATTGCATTGTGGGAACTAGTTTTGGGTCCTATGTAACACATTCTCTGGGTGGGTTCTTGTATTTTTCA
ATAGATAAAGTTTATATCCTTCTCTTCAAAACAGCAGTGGAGCCTCTATCTCGTGGAACATCGTTGAAAGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGTAGCGGAAATGGAGCTTGAGCGACGGAGCAAGTTTCTGAGTGGGCTTATTTTGAAGAAGAAGGCGGGGGAGCAGCAAGAGCAGCGTGATCATCTCAATGTTCG
CGTTAGAGCCTCCGATATGCCGTTTCCTCTGCAGAATCGCGCTTTTAGTTGCGCTCGTGAACTGCTCGATTCGATGCCTGGGAAGCTCGATAGCCAACGTCTTGCTCTTG
TCCTTAAAAAGGAATTTGATTCCTCCTATGGTCCGGCTTGGCATTGCATTGTGGGAACTAGTTTTGGGTCCTATGTAACACATTCTCTGGGTGGGTTCTTGTATTTTTCA
ATAGATAAAGTTTATATCCTTCTCTTCAAAACAGCAGTGGAGCCTCTATCTCGTGGAACATCGTTGAAAGATTGA
Protein sequenceShow/hide protein sequence
MDVAEMELERRSKFLSGLILKKKAGEQQEQRDHLNVRVRASDMPFPLQNRAFSCARELLDSMPGKLDSQRLALVLKKEFDSSYGPAWHCIVGTSFGSYVTHSLGGFLYFS
IDKVYILLFKTAVEPLSRGTSLKD