; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10009554 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10009554
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionmediator of RNA polymerase II transcription subunit 23
Genome locationChr06:7424602..7426634
RNA-Seq ExpressionHG10009554
SyntenyHG10009554
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0010628 - positive regulation of gene expression (biological process)
GO:0005667 - transcription factor complex (cellular component)
GO:0016592 - mediator complex (cellular component)
InterPro domainsIPR000873 - AMP-dependent synthetase/ligase
IPR021629 - Mediator complex, subunit Med23
IPR042099 - ANL, N-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579266.1 Mediator of RNA polymerase II transcription subunit 23, partial [Cucurbita argyrosperma subsp. sororia]1.5e-6067.86Show/hide
Query:  MKSGCIDFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARSICQSASILLICISHVVELKSDFLKIGKVETTRKIISFHREDKSAD
        MKSGCIDFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDAR                           KVETTRKI+SFHREDKSAD
Subjt:  MKSGCIDFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARSICQSASILLICISHVVELKSDFLKIGKVETTRKIISFHREDKSAD

Query:  PNNPQSILLDFISSCQNLRIWSLNTATREYLNSEQLQKGKQIDEWWRQASKGTRGFNPKNPRNCLSVGLF--------APNIEAEVIDWVSRSFMP
        PNNPQSILLDFISSCQNLRIWSLNTATREYLN+EQLQKGKQIDEWWRQA KG R  +  N  +  S+G+F         P  E  V++W+S + +P
Subjt:  PNNPQSILLDFISSCQNLRIWSLNTATREYLNSEQLQKGKQIDEWWRQASKGTRGFNPKNPRNCLSVGLF--------APNIEAEVIDWVSRSFMP

KAG7016782.1 Mediator of RNA polymerase II transcription subunit 23 [Cucurbita argyrosperma subsp. argyrosperma]1.5e-6067.86Show/hide
Query:  MKSGCIDFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARSICQSASILLICISHVVELKSDFLKIGKVETTRKIISFHREDKSAD
        MKSGCIDFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDAR                           KVETTRKI+SFHREDKSAD
Subjt:  MKSGCIDFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARSICQSASILLICISHVVELKSDFLKIGKVETTRKIISFHREDKSAD

Query:  PNNPQSILLDFISSCQNLRIWSLNTATREYLNSEQLQKGKQIDEWWRQASKGTRGFNPKNPRNCLSVGLF--------APNIEAEVIDWVSRSFMP
        PNNPQSILLDFISSCQNLRIWSLNTATREYLN+EQLQKGKQIDEWWRQA KG R  +  N  +  S+G+F         P  E  V++W+S + +P
Subjt:  PNNPQSILLDFISSCQNLRIWSLNTATREYLNSEQLQKGKQIDEWWRQASKGTRGFNPKNPRNCLSVGLF--------APNIEAEVIDWVSRSFMP

XP_022938601.1 mediator of RNA polymerase II transcription subunit 23 [Cucurbita moschata]1.5e-6067.86Show/hide
Query:  MKSGCIDFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARSICQSASILLICISHVVELKSDFLKIGKVETTRKIISFHREDKSAD
        MKSGCIDFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDAR                           KVETTRKI+SFHREDKSAD
Subjt:  MKSGCIDFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARSICQSASILLICISHVVELKSDFLKIGKVETTRKIISFHREDKSAD

Query:  PNNPQSILLDFISSCQNLRIWSLNTATREYLNSEQLQKGKQIDEWWRQASKGTRGFNPKNPRNCLSVGLF--------APNIEAEVIDWVSRSFMP
        PNNPQSILLDFISSCQNLRIWSLNTATREYLN+EQLQKGKQIDEWWRQA KG R  +  N  +  S+G+F         P  E  V++W+S + +P
Subjt:  PNNPQSILLDFISSCQNLRIWSLNTATREYLNSEQLQKGKQIDEWWRQASKGTRGFNPKNPRNCLSVGLF--------APNIEAEVIDWVSRSFMP

XP_022973546.1 mediator of RNA polymerase II transcription subunit 23 [Cucurbita maxima]8.5e-6167.86Show/hide
Query:  MKSGCIDFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARSICQSASILLICISHVVELKSDFLKIGKVETTRKIISFHREDKSAD
        MKSGCIDFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDAR                           KVETTRKI+SFHREDKSAD
Subjt:  MKSGCIDFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARSICQSASILLICISHVVELKSDFLKIGKVETTRKIISFHREDKSAD

Query:  PNNPQSILLDFISSCQNLRIWSLNTATREYLNSEQLQKGKQIDEWWRQASKGTRGFNPKNPRNCLSVGLF--------APNIEAEVIDWVSRSFMP
        PNNPQSILLDFISSCQNLRIWSLNT TREYLN+EQLQKGKQIDEWWRQASKG R  +  N  +  S+G+F         P  E  V++W+S + +P
Subjt:  PNNPQSILLDFISSCQNLRIWSLNTATREYLNSEQLQKGKQIDEWWRQASKGTRGFNPKNPRNCLSVGLF--------APNIEAEVIDWVSRSFMP

XP_023551559.1 mediator of RNA polymerase II transcription subunit 23 [Cucurbita pepo subsp. pepo]2.9e-6168.37Show/hide
Query:  MKSGCIDFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARSICQSASILLICISHVVELKSDFLKIGKVETTRKIISFHREDKSAD
        MKSGCIDFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDAR                           KVETTRKI+SFHREDKSAD
Subjt:  MKSGCIDFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARSICQSASILLICISHVVELKSDFLKIGKVETTRKIISFHREDKSAD

Query:  PNNPQSILLDFISSCQNLRIWSLNTATREYLNSEQLQKGKQIDEWWRQASKGTRGFNPKNPRNCLSVGLF--------APNIEAEVIDWVSRSFMP
        PNNPQSILLDFISSCQNLRIWSLNTATREYLN+EQLQKGKQIDEWWRQASKG R  +  N  +  S+G+F         P  E  V++W+S + +P
Subjt:  PNNPQSILLDFISSCQNLRIWSLNTATREYLNSEQLQKGKQIDEWWRQASKGTRGFNPKNPRNCLSVGLF--------APNIEAEVIDWVSRSFMP

TrEMBL top hitse value%identityAlignment
A0A1S3CSR7 mediator of RNA polymerase II transcription subunit 23 isoform X11.7e-5974.71Show/hide
Query:  MKSGCIDFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARSICQSASILLICISHVVELKSDFLKIGKVETTRKIISFHREDKSAD
        MKSGCIDFADFVAKLFSRVTEGG HVLRTNHVTWLFAQIIRVELVMSALNSDAR                           KVETTRKIISFHREDK+AD
Subjt:  MKSGCIDFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARSICQSASILLICISHVVELKSDFLKIGKVETTRKIISFHREDKSAD

Query:  PNNPQSILLDFISSCQNLRIWSLNTATREYLNSEQLQKGKQIDEWWRQASKGTRGFNPKNPRNCLSVGLF
        PNNPQSILLDFISSCQNLRIWSLNT TREYLNSEQLQKGKQIDEWWRQASKG R  +  N  +  S+G+F
Subjt:  PNNPQSILLDFISSCQNLRIWSLNTATREYLNSEQLQKGKQIDEWWRQASKGTRGFNPKNPRNCLSVGLF

A0A1S4DS63 mediator of RNA polymerase II transcription subunit 23 isoform X21.7e-5974.71Show/hide
Query:  MKSGCIDFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARSICQSASILLICISHVVELKSDFLKIGKVETTRKIISFHREDKSAD
        MKSGCIDFADFVAKLFSRVTEGG HVLRTNHVTWLFAQIIRVELVMSALNSDAR                           KVETTRKIISFHREDK+AD
Subjt:  MKSGCIDFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARSICQSASILLICISHVVELKSDFLKIGKVETTRKIISFHREDKSAD

Query:  PNNPQSILLDFISSCQNLRIWSLNTATREYLNSEQLQKGKQIDEWWRQASKGTRGFNPKNPRNCLSVGLF
        PNNPQSILLDFISSCQNLRIWSLNT TREYLNSEQLQKGKQIDEWWRQASKG R  +  N  +  S+G+F
Subjt:  PNNPQSILLDFISSCQNLRIWSLNTATREYLNSEQLQKGKQIDEWWRQASKGTRGFNPKNPRNCLSVGLF

A0A5A7TSF1 Mediator of RNA polymerase II transcription subunit 23 isoform X11.7e-5974.71Show/hide
Query:  MKSGCIDFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARSICQSASILLICISHVVELKSDFLKIGKVETTRKIISFHREDKSAD
        MKSGCIDFADFVAKLFSRVTEGG HVLRTNHVTWLFAQIIRVELVMSALNSDAR                           KVETTRKIISFHREDK+AD
Subjt:  MKSGCIDFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARSICQSASILLICISHVVELKSDFLKIGKVETTRKIISFHREDKSAD

Query:  PNNPQSILLDFISSCQNLRIWSLNTATREYLNSEQLQKGKQIDEWWRQASKGTRGFNPKNPRNCLSVGLF
        PNNPQSILLDFISSCQNLRIWSLNT TREYLNSEQLQKGKQIDEWWRQASKG R  +  N  +  S+G+F
Subjt:  PNNPQSILLDFISSCQNLRIWSLNTATREYLNSEQLQKGKQIDEWWRQASKGTRGFNPKNPRNCLSVGLF

A0A6J1FDL6 mediator of RNA polymerase II transcription subunit 237.1e-6167.86Show/hide
Query:  MKSGCIDFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARSICQSASILLICISHVVELKSDFLKIGKVETTRKIISFHREDKSAD
        MKSGCIDFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDAR                           KVETTRKI+SFHREDKSAD
Subjt:  MKSGCIDFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARSICQSASILLICISHVVELKSDFLKIGKVETTRKIISFHREDKSAD

Query:  PNNPQSILLDFISSCQNLRIWSLNTATREYLNSEQLQKGKQIDEWWRQASKGTRGFNPKNPRNCLSVGLF--------APNIEAEVIDWVSRSFMP
        PNNPQSILLDFISSCQNLRIWSLNTATREYLN+EQLQKGKQIDEWWRQA KG R  +  N  +  S+G+F         P  E  V++W+S + +P
Subjt:  PNNPQSILLDFISSCQNLRIWSLNTATREYLNSEQLQKGKQIDEWWRQASKGTRGFNPKNPRNCLSVGLF--------APNIEAEVIDWVSRSFMP

A0A6J1I8Y2 mediator of RNA polymerase II transcription subunit 234.1e-6167.86Show/hide
Query:  MKSGCIDFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARSICQSASILLICISHVVELKSDFLKIGKVETTRKIISFHREDKSAD
        MKSGCIDFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDAR                           KVETTRKI+SFHREDKSAD
Subjt:  MKSGCIDFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARSICQSASILLICISHVVELKSDFLKIGKVETTRKIISFHREDKSAD

Query:  PNNPQSILLDFISSCQNLRIWSLNTATREYLNSEQLQKGKQIDEWWRQASKGTRGFNPKNPRNCLSVGLF--------APNIEAEVIDWVSRSFMP
        PNNPQSILLDFISSCQNLRIWSLNT TREYLN+EQLQKGKQIDEWWRQASKG R  +  N  +  S+G+F         P  E  V++W+S + +P
Subjt:  PNNPQSILLDFISSCQNLRIWSLNTATREYLNSEQLQKGKQIDEWWRQASKGTRGFNPKNPRNCLSVGLF--------APNIEAEVIDWVSRSFMP

SwissProt top hitse value%identityAlignment
F4I4P3 Mediator of RNA polymerase II transcription subunit 235.1e-4854.87Show/hide
Query:  MKSGCIDFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARSICQSASILLICISHVVELKSDFLKIGKVETTRKIISFHREDKSAD
        +KSGC DF DF+ KL  R+    +H+LRTNHVTWL AQIIRVELVM+ALNSDA+                           KVETTRKI+SFHRED+++D
Subjt:  MKSGCIDFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARSICQSASILLICISHVVELKSDFLKIGKVETTRKIISFHREDKSAD

Query:  PNNPQSILLDFISSCQNLRIWSLNTATREYLNSEQLQKGKQIDEWWRQASKGTRGFNPKNPRNCLSVGLF--------APNIEAEVIDWVSRSFM
        PNNPQS+LLDF+SSCQNLRIWSL+T TR YLN+EQL KGKQIDEWWR  SKG R  +  N  +  S+G+F         P  E  VI+W+S + M
Subjt:  PNNPQSILLDFISSCQNLRIWSLNTATREYLNSEQLQKGKQIDEWWRQASKGTRGFNPKNPRNCLSVGLF--------APNIEAEVIDWVSRSFM

Q6YYZ2 4-coumarate--CoA ligase-like 31.7e-1938.69Show/hide
Query:  GTRGFNPKNPRNCLSVGLFAPNIEAEVIDWVSRSFMPPGKTQKLLLCGPGLVKGYLNIPKATMCTIDQENLLHTGDFVYFDGEEYLSVVDRLKEVI----
        GTRGFN    +   SVGL APN+ A+++   S S +PPG + +L L GPG++KGYL+      CT  ++  L TGD  YFD + YL +V RLK+ I    
Subjt:  GTRGFNPKNPRNCLSVGLFAPNIEAEVIDWVSRSFMPPGKTQKLLLCGPGLVKGYLNIPKATMCTIDQENLLHTGDFVYFDGEEYLSVVDRLKEVI----

Query:  --TCCGDL--------EVLDTGVAVAVDEECWEILVAFVGQEARKHALMKMLQIMLLNRSHCVKRFEK
             GDL        E+LD  V  A DEE  EI VAFV + +  +   K +   +  +    KR  K
Subjt:  --TCCGDL--------EVLDTGVAVAVDEECWEILVAFVGQEARKHALMKMLQIMLLNRSHCVKRFEK

Q84P23 4-coumarate--CoA ligase-like 91.2e-1737.78Show/hide
Query:  FNPKNPRNCLSVGLFAPNIEAEVIDWVSRSFMPPGKTQKLLLCGPGLVKGYLNIPKATMCTIDQENLLHTGDFVYFDGEEYLSVVDRLKEVI--------
        F P+      SVG  + N+EA+++D  +   +PPGKT +L L GP ++KGY+   KA+  T+D+E  L TGD  YFD E++L +VDRLKE+I        
Subjt:  FNPKNPRNCLSVGLFAPNIEAEVIDWVSRSFMPPGKTQKLLLCGPGLVKGYLNIPKATMCTIDQENLLHTGDFVYFDGEEYLSVVDRLKEVI--------

Query:  ------TCCGDLEVLDTGVAVAVDEECWEILVAFV
                  + +V+D  V    DE+  EI +AF+
Subjt:  ------TCCGDLEVLDTGVAVAVDEECWEILVAFV

Q84P24 4-coumarate--CoA ligase-like 64.0e-2948.92Show/hide
Query:  GTRGFNPKNPRNCLSVGLFAPNIEAEVIDWVSRSFMPPGKTQKLLLCGPGLVKGYLNIPKATMCTIDQENLLHTGDFVYFDGEEYLSVVDRLKEVITCCG
        GTRGFN +      SVGL APN++A+V+DW S SF+PPG   +L + GPG++KGYLN PKAT  +I +++ L TGD  YFD + YL +VDR+KE+I   G
Subjt:  GTRGFNPKNPRNCLSVGLFAPNIEAEVIDWVSRSFMPPGKTQKLLLCGPGLVKGYLNIPKATMCTIDQENLLHTGDFVYFDGEEYLSVVDRLKEVITCCG

Query:  ------DLE--------VLDTGVAVAVDEECWEILVAFV
              DLE        ++D  V  A +EEC EI VAFV
Subjt:  ------DLE--------VLDTGVAVAVDEECWEILVAFV

Q9M0X9 4-coumarate--CoA ligase-like 71.0e-1638.76Show/hide
Query:  RNCLSVGLFAPNIEAEVIDWVSRSFMPPGKTQKLLLCGPGLVKGYLNIPKATMCTIDQENLLHTGDFVYFDGEEYLSVVDRLKEVITCCG------DLE-
        RN  S G+ AP +EA+++   +    PP +  ++ + GP ++KGYLN P+AT  TID+++ +HTGD  YF+ +  L VVDR+KE+I   G      +LE 
Subjt:  RNCLSVGLFAPNIEAEVIDWVSRSFMPPGKTQKLLLCGPGLVKGYLNIPKATMCTIDQENLLHTGDFVYFDGEEYLSVVDRLKEVITCCG------DLE-

Query:  -------VLDTGVAVAVDEECWEILVAFV
               +LD  V    DEE  E+ +AFV
Subjt:  -------VLDTGVAVAVDEECWEILVAFV

Arabidopsis top hitse value%identityAlignment
AT1G23230.1 CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629); Has 187 Blast hits to 184 proteins in 67 species: Archae - 0; Bacteria - 0; Metazoa - 135; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).3.6e-4954.87Show/hide
Query:  MKSGCIDFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARSICQSASILLICISHVVELKSDFLKIGKVETTRKIISFHREDKSAD
        +KSGC DF DF+ KL  R+    +H+LRTNHVTWL AQIIRVELVM+ALNSDA+                           KVETTRKI+SFHRED+++D
Subjt:  MKSGCIDFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARSICQSASILLICISHVVELKSDFLKIGKVETTRKIISFHREDKSAD

Query:  PNNPQSILLDFISSCQNLRIWSLNTATREYLNSEQLQKGKQIDEWWRQASKGTRGFNPKNPRNCLSVGLF--------APNIEAEVIDWVSRSFM
        PNNPQS+LLDF+SSCQNLRIWSL+T TR YLN+EQL KGKQIDEWWR  SKG R  +  N  +  S+G+F         P  E  VI+W+S + M
Subjt:  PNNPQSILLDFISSCQNLRIWSLNTATREYLNSEQLQKGKQIDEWWRQASKGTRGFNPKNPRNCLSVGLF--------APNIEAEVIDWVSRSFM

AT1G23230.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mediator complex subunit Med23 (InterPro:IPR021629).3.6e-4954.87Show/hide
Query:  MKSGCIDFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARSICQSASILLICISHVVELKSDFLKIGKVETTRKIISFHREDKSAD
        +KSGC DF DF+ KL  R+    +H+LRTNHVTWL AQIIRVELVM+ALNSDA+                           KVETTRKI+SFHRED+++D
Subjt:  MKSGCIDFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARSICQSASILLICISHVVELKSDFLKIGKVETTRKIISFHREDKSAD

Query:  PNNPQSILLDFISSCQNLRIWSLNTATREYLNSEQLQKGKQIDEWWRQASKGTRGFNPKNPRNCLSVGLF--------APNIEAEVIDWVSRSFM
        PNNPQS+LLDF+SSCQNLRIWSL+T TR YLN+EQL KGKQIDEWWR  SKG R  +  N  +  S+G+F         P  E  VI+W+S + M
Subjt:  PNNPQSILLDFISSCQNLRIWSLNTATREYLNSEQLQKGKQIDEWWRQASKGTRGFNPKNPRNCLSVGLF--------APNIEAEVIDWVSRSFM

AT4G05160.1 AMP-dependent synthetase and ligase family protein7.3e-1838.76Show/hide
Query:  RNCLSVGLFAPNIEAEVIDWVSRSFMPPGKTQKLLLCGPGLVKGYLNIPKATMCTIDQENLLHTGDFVYFDGEEYLSVVDRLKEVITCCG------DLE-
        RN  S G+ AP +EA+++   +    PP +  ++ + GP ++KGYLN P+AT  TID+++ +HTGD  YF+ +  L VVDR+KE+I   G      +LE 
Subjt:  RNCLSVGLFAPNIEAEVIDWVSRSFMPPGKTQKLLLCGPGLVKGYLNIPKATMCTIDQENLLHTGDFVYFDGEEYLSVVDRLKEVITCCG------DLE-

Query:  -------VLDTGVAVAVDEECWEILVAFV
               +LD  V    DEE  E+ +AFV
Subjt:  -------VLDTGVAVAVDEECWEILVAFV

AT4G19010.1 AMP-dependent synthetase and ligase family protein2.9e-3048.92Show/hide
Query:  GTRGFNPKNPRNCLSVGLFAPNIEAEVIDWVSRSFMPPGKTQKLLLCGPGLVKGYLNIPKATMCTIDQENLLHTGDFVYFDGEEYLSVVDRLKEVITCCG
        GTRGFN +      SVGL APN++A+V+DW S SF+PPG   +L + GPG++KGYLN PKAT  +I +++ L TGD  YFD + YL +VDR+KE+I   G
Subjt:  GTRGFNPKNPRNCLSVGLFAPNIEAEVIDWVSRSFMPPGKTQKLLLCGPGLVKGYLNIPKATMCTIDQENLLHTGDFVYFDGEEYLSVVDRLKEVITCCG

Query:  ------DLE--------VLDTGVAVAVDEECWEILVAFV
              DLE        ++D  V  A +EEC EI VAFV
Subjt:  ------DLE--------VLDTGVAVAVDEECWEILVAFV

AT5G63380.1 AMP-dependent synthetase and ligase family protein8.6e-1937.78Show/hide
Query:  FNPKNPRNCLSVGLFAPNIEAEVIDWVSRSFMPPGKTQKLLLCGPGLVKGYLNIPKATMCTIDQENLLHTGDFVYFDGEEYLSVVDRLKEVI--------
        F P+      SVG  + N+EA+++D  +   +PPGKT +L L GP ++KGY+   KA+  T+D+E  L TGD  YFD E++L +VDRLKE+I        
Subjt:  FNPKNPRNCLSVGLFAPNIEAEVIDWVSRSFMPPGKTQKLLLCGPGLVKGYLNIPKATMCTIDQENLLHTGDFVYFDGEEYLSVVDRLKEVI--------

Query:  ------TCCGDLEVLDTGVAVAVDEECWEILVAFV
                  + +V+D  V    DE+  EI +AF+
Subjt:  ------TCCGDLEVLDTGVAVAVDEECWEILVAFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAGTGGATGTATTGATTTTGCGGACTTTGTGGCTAAGCTGTTCTCTCGTGTAACAGAGGGAGGTCACCATGTTTTAAGGACAAATCATGTCACTTGGCTGTTTGC
ACAAATCATTCGGGTTGAACTTGTGATGAGTGCTTTGAATTCAGATGCAAGAAGTATTTGTCAATCCGCAAGCATATTGTTAATATGCATTAGCCATGTTGTGGAATTGA
AGTCTGATTTCCTCAAAATTGGAAAAGTGGAGACGACAAGAAAAATAATATCATTTCATAGAGAAGATAAAAGTGCTGATCCAAATAATCCTCAAAGCATCTTGCTTGAT
TTTATTAGCAGTTGTCAGAACTTGCGTATTTGGTCTCTAAACACAGCAACAAGAGAATATTTGAATAGTGAGCAGCTACAGAAAGGAAAACAAATTGATGAATGGTGGAG
GCAAGCAAGTAAAGGAACTCGTGGCTTCAACCCCAAAAATCCTAGAAATTGTTTGTCAGTGGGACTTTTTGCTCCAAACATAGAAGCTGAAGTAATTGATTGGGTCAGCA
GATCTTTCATGCCTCCTGGTAAAACCCAGAAACTTCTGTTATGCGGACCTGGTTTAGTGAAAGGGTACTTGAATATTCCGAAGGCAACAATGTGCACAATAGACCAAGAA
AATCTGCTACATACTGGAGACTTCGTCTACTTCGATGGAGAAGAATACTTGTCTGTTGTTGATCGTTTGAAGGAGGTTATAACATGCTGTGGTGATCTAGAAGTTCTTGA
CACTGGAGTAGCAGTGGCCGTTGATGAAGAATGTTGGGAGATTCTAGTGGCATTTGTTGGTCAAGAAGCCAGGAAGCACGCACTCATGAAAATGTTACAGATTATGTTGC
TCAACAGATCGCACTGTGTAAAAAGGTTTGAAAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAGTGGATGTATTGATTTTGCGGACTTTGTGGCTAAGCTGTTCTCTCGTGTAACAGAGGGAGGTCACCATGTTTTAAGGACAAATCATGTCACTTGGCTGTTTGC
ACAAATCATTCGGGTTGAACTTGTGATGAGTGCTTTGAATTCAGATGCAAGAAGTATTTGTCAATCCGCAAGCATATTGTTAATATGCATTAGCCATGTTGTGGAATTGA
AGTCTGATTTCCTCAAAATTGGAAAAGTGGAGACGACAAGAAAAATAATATCATTTCATAGAGAAGATAAAAGTGCTGATCCAAATAATCCTCAAAGCATCTTGCTTGAT
TTTATTAGCAGTTGTCAGAACTTGCGTATTTGGTCTCTAAACACAGCAACAAGAGAATATTTGAATAGTGAGCAGCTACAGAAAGGAAAACAAATTGATGAATGGTGGAG
GCAAGCAAGTAAAGGAACTCGTGGCTTCAACCCCAAAAATCCTAGAAATTGTTTGTCAGTGGGACTTTTTGCTCCAAACATAGAAGCTGAAGTAATTGATTGGGTCAGCA
GATCTTTCATGCCTCCTGGTAAAACCCAGAAACTTCTGTTATGCGGACCTGGTTTAGTGAAAGGGTACTTGAATATTCCGAAGGCAACAATGTGCACAATAGACCAAGAA
AATCTGCTACATACTGGAGACTTCGTCTACTTCGATGGAGAAGAATACTTGTCTGTTGTTGATCGTTTGAAGGAGGTTATAACATGCTGTGGTGATCTAGAAGTTCTTGA
CACTGGAGTAGCAGTGGCCGTTGATGAAGAATGTTGGGAGATTCTAGTGGCATTTGTTGGTCAAGAAGCCAGGAAGCACGCACTCATGAAAATGTTACAGATTATGTTGC
TCAACAGATCGCACTGTGTAAAAAGGTTTGAAAAGTGA
Protein sequenceShow/hide protein sequence
MKSGCIDFADFVAKLFSRVTEGGHHVLRTNHVTWLFAQIIRVELVMSALNSDARSICQSASILLICISHVVELKSDFLKIGKVETTRKIISFHREDKSADPNNPQSILLD
FISSCQNLRIWSLNTATREYLNSEQLQKGKQIDEWWRQASKGTRGFNPKNPRNCLSVGLFAPNIEAEVIDWVSRSFMPPGKTQKLLLCGPGLVKGYLNIPKATMCTIDQE
NLLHTGDFVYFDGEEYLSVVDRLKEVITCCGDLEVLDTGVAVAVDEECWEILVAFVGQEARKHALMKMLQIMLLNRSHCVKRFEK