; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10009573 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10009573
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionB3 domain-containing protein At2g31420-like
Genome locationChr06:7585481..7585882
RNA-Seq ExpressionHG10009573
SyntenyHG10009573
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR005508 - B3 domain-containing protein At2g31720-like
IPR015300 - DNA-binding pseudobarrel domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038874960.1 B3 domain-containing protein At2g31420-like [Benincasa hispida]9.2e-5279.07Show/hide
Query:  MGGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLLYDFATEEERKLLSEQENKNKKGMNVVIMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLK
        MGG+ INLVIQKQLQDTDLNKN GRLSLPA+KLL+DFATEEE+KLLS++ENK KKGMNV+IMD+V EER ICLKKWKIGSGDVYCLMTQWN F EE+ LK
Subjt:  MGGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLLYDFATEEERKLLSEQENKNKKGMNVVIMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLK

Query:  SGDHIRLWSFRKDDEIEGSSHLCFAMVKL
        SG HI++W FR+DDE E +S LCF MVKL
Subjt:  SGDHIRLWSFRKDDEIEGSSHLCFAMVKL

XP_038874962.1 putative B3 domain-containing protein At5g35780 [Benincasa hispida]1.9e-5279.84Show/hide
Query:  MGGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLLYDFATEEERKLLSEQENKNKKGMNVVIMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLK
        MGG+EINLVIQKQLQDTDLNKN GRLSLP +KLL+DFATEEE+KLLS++ENK KKGMNV+IMD+V EERRICLKKWKIGSGDVYCLMTQWN F EE  LK
Subjt:  MGGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLLYDFATEEERKLLSEQENKNKKGMNVVIMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLK

Query:  SGDHIRLWSFRKDDEIEGSSHLCFAMVKL
        SG HI++W FR+DDE E +S LCF MVKL
Subjt:  SGDHIRLWSFRKDDEIEGSSHLCFAMVKL

XP_038875653.1 B3 domain-containing protein At1g05920-like [Benincasa hispida]1.2e-5987.12Show/hide
Query:  MGGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLLYDFATEEERKLLSEQENKNKKGMNVVIMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLK
        MGG+EINLVIQKQLQDTDLNKN GRLSLP KKLL+DFATEEER+LLS+QENKNKKG+NVVIMD VLEER ICLKKWKIGSGDVYCLMTQWN FV+ER LK
Subjt:  MGGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLLYDFATEEERKLLSEQENKNKKGMNVVIMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLK

Query:  SGDHIRLWSFRKDDEIEGSSHLCFAMVKLIHG
        SGDHI+LWSFRKDDE EG   LCFAMVKLIHG
Subjt:  SGDHIRLWSFRKDDEIEGSSHLCFAMVKLIHG

XP_038876237.1 putative B3 domain-containing protein At3g24850 [Benincasa hispida]1.4e-5280.62Show/hide
Query:  MGGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLLYDFATEEERKLLSEQENKNKKGMNVVIMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLK
        MGG+ INLVIQKQLQDTDLNKN GRLSLPA+KLL+DF TE+E+ LLS++ENK KKGMNV+IMDDVLEERRICLK WKIGSGDVYCLMTQWN+FVEE  LK
Subjt:  MGGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLLYDFATEEERKLLSEQENKNKKGMNVVIMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLK

Query:  SGDHIRLWSFRKDDEIEGSSHLCFAMVKL
        SG+HI++W FRKDDE E +S LCFAMVKL
Subjt:  SGDHIRLWSFRKDDEIEGSSHLCFAMVKL

XP_038907053.1 B3 domain-containing protein At2g31420-like [Benincasa hispida]4.3e-4977.52Show/hide
Query:  MGGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLLYDFATEEERKLLSEQENKNKKGMNVVIMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLK
        MGG+EI LVIQKQL+DTDL+KNHGRLS+P KKLL+DF TEEERKLLSE EN+NKKG+N VI+DDV EER ICLKKWKIGSGDVYCL TQWN+ VEE  LK
Subjt:  MGGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLLYDFATEEERKLLSEQENKNKKGMNVVIMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLK

Query:  SGDHIRLWSFRKDDEIEGSSHLCFAMVKL
         G HI++WSFRKDDE E + H+CFAMVKL
Subjt:  SGDHIRLWSFRKDDEIEGSSHLCFAMVKL

TrEMBL top hitse value%identityAlignment
A0A0A0KP87 Uncharacterized protein1.8e-4875.97Show/hide
Query:  MGGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLLYDFATEEERKLLSEQENKNKKGMNVVIMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLK
        MGG+EINLVIQKQL DTDLNKNHGRLS+  K+L +DFATEEE KLLSEQENKNK G+NV+I+DDVLEER +CLKKWKIGSG VYCLMT+WN  VEER LK
Subjt:  MGGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLLYDFATEEERKLLSEQENKNKKGMNVVIMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLK

Query:  SGDHIRLWSFRKDDEIEGSSHLCFAMVKL
        SG+ I++WSFRKDDE E +  LC A+VKL
Subjt:  SGDHIRLWSFRKDDEIEGSSHLCFAMVKL

A0A1S4E600 putative B3 domain-containing protein At3g248502.3e-4873.64Show/hide
Query:  MGGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLLYDFATEEERKLLSEQENKNKKGMNVVIMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLK
        MGG+EI LVIQKQL DTDLNKNHGRLS+  K+L +DFATEEE KLLSEQENKNK+G+NV+++DDVLEER +CLKKWKIGSG+VYCLMT+WN  VEER  K
Subjt:  MGGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLLYDFATEEERKLLSEQENKNKKGMNVVIMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLK

Query:  SGDHIRLWSFRKDDEIEGSSHLCFAMVKL
         G+ I++WSFRKDDE E +  LCFA+VKL
Subjt:  SGDHIRLWSFRKDDEIEGSSHLCFAMVKL

A0A5A7TWX2 Putative B3 domain-containing protein5.1e-4873.64Show/hide
Query:  MGGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLLYDFATEEERKLLSEQENKNKKGMNVVIMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLK
        MGG+EI LVIQKQL DTDLNKNHGRLS+  K+L +DFATEEE +LLSEQENKNKKG+NV+I+DDVLEER +CLKKWKIGSG+VYCLMT+WN  VE+R  +
Subjt:  MGGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLLYDFATEEERKLLSEQENKNKKGMNVVIMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLK

Query:  SGDHIRLWSFRKDDEIEGSSHLCFAMVKL
        SG+ I++WSFRKDDE E +  LCFA+VKL
Subjt:  SGDHIRLWSFRKDDEIEGSSHLCFAMVKL

A0A5A7TY85 Putative B3 domain-containing protein3.9e-4875.19Show/hide
Query:  MGGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLLYDFATEEERKLLSEQENKNKKGMNVVIMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLK
        MGG+EI LVIQKQL DTDLNK HGRLS+  K+L +DFATEEE KLLSEQENKNKKG+NV+I+DDVLEER +CLKKWKIGSG+VYCLMT+WN  VE+R  K
Subjt:  MGGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLLYDFATEEERKLLSEQENKNKKGMNVVIMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLK

Query:  SGDHIRLWSFRKDDEIEGSSHLCFAMVKL
        SG+ I+LWSFRKDDE E +  LCFA+VKL
Subjt:  SGDHIRLWSFRKDDEIEGSSHLCFAMVKL

A0A5A7TY94 Putative B3 domain-containing protein2.3e-4873.64Show/hide
Query:  MGGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLLYDFATEEERKLLSEQENKNKKGMNVVIMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLK
        MGG+EI LVIQKQL DTDLNKNHGRLS+  K+L +DFATEEE KLLSEQENKNK+G+NV+++DDVLEER +CLKKWKIGSG+VYCLMT+WN  VEER  K
Subjt:  MGGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLLYDFATEEERKLLSEQENKNKKGMNVVIMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLK

Query:  SGDHIRLWSFRKDDEIEGSSHLCFAMVKL
         G+ I++WSFRKDDE E +  LCFA+VKL
Subjt:  SGDHIRLWSFRKDDEIEGSSHLCFAMVKL

SwissProt top hitse value%identityAlignment
F4I8U3 Putative B3 domain-containing protein At1g056155.0e-0830.12Show/hide
Query:  YDFATEEERKLLSEQENKNK-KGMNVVIMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLKSGDHIRLWSFRKDDEI
        ++F   +E++++ E  NK + +G++V++++    E  + L++W +G+  +Y L++     V+  RLK G+ IR+WSF  DD++
Subjt:  YDFATEEERKLLSEQENKNK-KGMNVVIMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLKSGDHIRLWSFRKDDEI

Q5RM09 B3 domain-containing protein At1g059202.2e-1133.58Show/hide
Query:  GGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLLY-DFATEEERKLLSEQE--NKNKKGMNVVIMDDVLEERRICLKKW--KIGSGDVY---CLMTQWNTF
        G  +  L+I+K L   D++    RLS+P   ++  DF T +E +L+ E E  N+   G+   ++D   ++  +  K+W     SG  Y    L  +W+  
Subjt:  GGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLLY-DFATEEERKLLSEQE--NKNKKGMNVVIMDDVLEERRICLKKW--KIGSGDVY---CLMTQWNTF

Query:  VEERRLKSGDHIRLWSFRKDDEIEGSSHLCFAMV
        VE   LK GD I LWSFR +D       LCFA+V
Subjt:  VEERRLKSGDHIRLWSFRKDDEIEGSSHLCFAMV

Q8RV83 B3 domain-containing protein At2g317204.1e-1030.51Show/hide
Query:  MGGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLL-YDFATEEERKLLSEQENK---NKKGMNVVIMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEE
        + G +  L+  K L ++D+++   RL +P K++L  DF  EEE + +     K   + KG +V++++    +R++ LK+W + S   Y L   WN  V +
Subjt:  MGGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLL-YDFATEEERKLLSEQENK---NKKGMNVVIMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEE

Query:  RRLKSGDHIRLWSFRKDD
          L+ G  +R+WSF   D
Subjt:  RRLKSGDHIRLWSFRKDD

Q9FFX1 B3 domain-containing protein At5g385002.3e-0526.85Show/hide
Query:  LVIQKQLQDTDLNKNHGRLSLPAKKLL-YDFATEEERKLLSEQENKNKK------------------------GMNVVIMDDVLEERRICLKKWKI----
        L+ ++ L  +D+N N  RL +P +KL+  DF T EE + + E ++K+ +                        G   ++++   +   +  K W +    
Subjt:  LVIQKQLQDTDLNKNHGRLSLPAKKLL-YDFATEEERKLLSEQENKNKK------------------------GMNVVIMDDVLEERRICLKKWKI----

Query:  GSGDV-YCLMTQWNTFVEERRLKSGDHIRLWSFRKDDEIEGSSHLCFAM
        G G + Y L   WN  V+   LK+GD+I LW+FR          LCFA+
Subjt:  GSGDV-YCLMTQWNTFVEERRLKSGDHIRLWSFRKDDEIEGSSHLCFAM

Q9ZV39 Putative B3 domain-containing protein At2g188101.2e-0634.15Show/hide
Query:  DFATEEERKLLSEQENK---NKKGMNVVIMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLKSGDHIRLWSFRKDD
        DF  EEE + +     K   + KG +V++++    +R++ LK+W + S   Y L + WN  V E  L++G  +RLWSF   D
Subjt:  DFATEEERKLLSEQENK---NKKGMNVVIMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLKSGDHIRLWSFRKDD

Arabidopsis top hitse value%identityAlignment
AT1G05615.1 Domain of unknown function (DUF313)3.5e-0930.12Show/hide
Query:  YDFATEEERKLLSEQENKNK-KGMNVVIMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLKSGDHIRLWSFRKDDEI
        ++F   +E++++ E  NK + +G++V++++    E  + L++W +G+  +Y L++     V+  RLK G+ IR+WSF  DD++
Subjt:  YDFATEEERKLLSEQENKNK-KGMNVVIMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLKSGDHIRLWSFRKDDEI

AT1G05920.1 Domain of unknown function (DUF313)1.5e-1233.58Show/hide
Query:  GGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLLY-DFATEEERKLLSEQE--NKNKKGMNVVIMDDVLEERRICLKKW--KIGSGDVY---CLMTQWNTF
        G  +  L+I+K L   D++    RLS+P   ++  DF T +E +L+ E E  N+   G+   ++D   ++  +  K+W     SG  Y    L  +W+  
Subjt:  GGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLLY-DFATEEERKLLSEQE--NKNKKGMNVVIMDDVLEERRICLKKW--KIGSGDVY---CLMTQWNTF

Query:  VEERRLKSGDHIRLWSFRKDDEIEGSSHLCFAMV
        VE   LK GD I LWSFR +D       LCFA+V
Subjt:  VEERRLKSGDHIRLWSFRKDDEIEGSSHLCFAMV

AT2G18810.1 Domain of unknown function (DUF313)8.7e-0834.15Show/hide
Query:  DFATEEERKLLSEQENK---NKKGMNVVIMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLKSGDHIRLWSFRKDD
        DF  EEE + +     K   + KG +V++++    +R++ LK+W + S   Y L + WN  V E  L++G  +RLWSF   D
Subjt:  DFATEEERKLLSEQENK---NKKGMNVVIMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLKSGDHIRLWSFRKDD

AT2G31720.1 Domain of unknown function (DUF313)2.9e-1130.51Show/hide
Query:  MGGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLL-YDFATEEERKLLSEQENK---NKKGMNVVIMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEE
        + G +  L+  K L ++D+++   RL +P K++L  DF  EEE + +     K   + KG +V++++    +R++ LK+W + S   Y L   WN  V +
Subjt:  MGGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLL-YDFATEEERKLLSEQENK---NKKGMNVVIMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEE

Query:  RRLKSGDHIRLWSFRKDD
          L+ G  +R+WSF   D
Subjt:  RRLKSGDHIRLWSFRKDD

AT5G38500.1 Domain of unknown function (DUF313)1.6e-0626.85Show/hide
Query:  LVIQKQLQDTDLNKNHGRLSLPAKKLL-YDFATEEERKLLSEQENKNKK------------------------GMNVVIMDDVLEERRICLKKWKI----
        L+ ++ L  +D+N N  RL +P +KL+  DF T EE + + E ++K+ +                        G   ++++   +   +  K W +    
Subjt:  LVIQKQLQDTDLNKNHGRLSLPAKKLL-YDFATEEERKLLSEQENKNKK------------------------GMNVVIMDDVLEERRICLKKWKI----

Query:  GSGDV-YCLMTQWNTFVEERRLKSGDHIRLWSFRKDDEIEGSSHLCFAM
        G G + Y L   WN  V+   LK+GD+I LW+FR          LCFA+
Subjt:  GSGDV-YCLMTQWNTFVEERRLKSGDHIRLWSFRKDDEIEGSSHLCFAM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGGACATGAAATTAACCTGGTGATTCAAAAGCAACTTCAAGATACAGATCTAAACAAGAATCACGGGCGTTTGTCTCTTCCTGCAAAGAAATTACTGTATGATTT
TGCAACAGAGGAGGAGAGGAAGCTGCTGAGCGAACAAGAAAACAAGAACAAAAAAGGGATGAATGTAGTGATAATGGATGATGTTTTAGAAGAAAGAAGAATTTGTTTGA
AGAAGTGGAAGATTGGAAGTGGGGATGTGTACTGTTTGATGACACAGTGGAATACGTTTGTGGAAGAAAGGAGATTGAAAAGTGGAGACCATATTCGACTGTGGAGCTTC
AGAAAAGATGATGAAATTGAGGGTTCTTCTCATCTCTGTTTTGCAATGGTGAAGCTAATTCATGGGGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGGACATGAAATTAACCTGGTGATTCAAAAGCAACTTCAAGATACAGATCTAAACAAGAATCACGGGCGTTTGTCTCTTCCTGCAAAGAAATTACTGTATGATTT
TGCAACAGAGGAGGAGAGGAAGCTGCTGAGCGAACAAGAAAACAAGAACAAAAAAGGGATGAATGTAGTGATAATGGATGATGTTTTAGAAGAAAGAAGAATTTGTTTGA
AGAAGTGGAAGATTGGAAGTGGGGATGTGTACTGTTTGATGACACAGTGGAATACGTTTGTGGAAGAAAGGAGATTGAAAAGTGGAGACCATATTCGACTGTGGAGCTTC
AGAAAAGATGATGAAATTGAGGGTTCTTCTCATCTCTGTTTTGCAATGGTGAAGCTAATTCATGGGGTGTGA
Protein sequenceShow/hide protein sequence
MGGHEINLVIQKQLQDTDLNKNHGRLSLPAKKLLYDFATEEERKLLSEQENKNKKGMNVVIMDDVLEERRICLKKWKIGSGDVYCLMTQWNTFVEERRLKSGDHIRLWSF
RKDDEIEGSSHLCFAMVKLIHGV