CuGenDBv2

Gene ID	HG10009612
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3
Genome location	Chr06:8176305..8181190
RNA-Seq Expression	HG10009612
Synteny	HG10009612
Gene Ontology terms	GO:0010020 - chloroplast fission (biological process) GO:0015074 - DNA integration (biological process) GO:0009570 - chloroplast stroma (cellular component) GO:0009707 - chloroplast outer membrane (cellular component) GO:0035452 - extrinsic component of plastid membrane (cellular component) GO:0003676 - nucleic acid binding (molecular function) GO:0003924 - GTPase activity (molecular function) GO:0005525 - GTP binding (molecular function) GO:0043621 - protein self-association (molecular function)
InterPro domains	IPR036525 - Tubulin/FtsZ, GTPase domain superfamily IPR045013 - ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7016680.1 Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 [Cucurbita argyrosperma subsp. argyrosperma]

1.1e-48

75.48

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Query:  MIDVPLSLQSCSKTVILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQDERTPLGQVGGEYFAEDPTWSSGRRWKPVD-LKDIDTDRL
        MIDVPLSLQSCSK VILVVSAGYG DYSAAVDILRT+RSANGFTVTIVLKPFSFEG+RRQDE   L                GR  +    L DIDTDRL
Subjt:  MIDVPLSLQSCSKTVILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQDERTPLGQVGGEYFAEDPTWSSGRRWKPVD-LKDIDTDRL

Query:  LEKDLVTLDEAVRSANNAVLLAINSVSIVKSEMLIKFVDEPQNDVKELDVIDVME
        LEKDLVTLDEAVRSANNAVL+AINS+SI+KSEML KF+DEPQN VKEL VIDVME
Subjt:  LEKDLVTLDEAVRSANNAVLLAINSVSIVKSEMLIKFVDEPQNDVKELDVIDVME

XP_011654532.1 protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 [Cucumis sativus]

2.9e-49

76.77

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Query:  MIDVPLSLQSCSKTVILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQDERTPLGQVGGEYFAEDPTWSSGRRWKPVD-LKDIDTDRL
        MIDVPLSLQSCSK VILVVSAGYGFDYSAAVD+LRTIRSANGFTVTIVLKPFSFEGKRRQDE   L                GR  +    L DIDTDRL
Subjt:  MIDVPLSLQSCSKTVILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQDERTPLGQVGGEYFAEDPTWSSGRRWKPVD-LKDIDTDRL

Query:  LEKDLVTLDEAVRSANNAVLLAINSVSIVKSEMLIKFVDEPQNDVKELDVIDVME
        LEKDLVTLD+AVRSANNAVLLAINS+SIVKSEM+IKFVDEPQND+KEL  +DVME
Subjt:  LEKDLVTLDEAVRSANNAVLLAINSVSIVKSEMLIKFVDEPQNDVKELDVIDVME

XP_022992937.1 protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 [Cucurbita maxima]

8.5e-49

76.62

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Query:  MIDVPLSLQSCSKTVILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQDERTPLGQVGGEYFAEDPTWSSGRRWKPVDLKDIDTDRLL
        MIDVPLSLQSCSK VILVVSAGYG DYSAAVDILRT+RSANGFTVTIVLKPFSFEG+RRQDE   L  VG     E  ++          L DIDTDRLL
Subjt:  MIDVPLSLQSCSKTVILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQDERTPLGQVGGEYFAEDPTWSSGRRWKPVDLKDIDTDRLL

Query:  EKDLVTLDEAVRSANNAVLLAINSVSIVKSEMLIKFVDEPQNDVKELDVIDVME
        EKDLVTLDEAVRSANNAVL+AINS+SI+KSEML KF+DEPQN VKEL VIDVME
Subjt:  EKDLVTLDEAVRSANNAVLLAINSVSIVKSEMLIKFVDEPQNDVKELDVIDVME

XP_023550462.1 protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 [Cucurbita pepo subsp. pepo]

1.5e-48

75.48

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Query:  MIDVPLSLQSCSKTVILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQDERTPLGQVGGEYFAEDPTWSSGRRWKPVD-LKDIDTDRL
        MIDVPLSLQSCSK VILVVSAGYG DYSAAVDILRT+RSANGFTVTIVLKPFSFEG+RRQDE   L                GR  +    L DIDTDRL
Subjt:  MIDVPLSLQSCSKTVILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQDERTPLGQVGGEYFAEDPTWSSGRRWKPVD-LKDIDTDRL

Query:  LEKDLVTLDEAVRSANNAVLLAINSVSIVKSEMLIKFVDEPQNDVKELDVIDVME
        LEKDLVTLDEAVRSANNAVL+AINS+SI+KSEML KF+DEPQN VKEL VIDVME
Subjt:  LEKDLVTLDEAVRSANNAVLLAINSVSIVKSEMLIKFVDEPQNDVKELDVIDVME

XP_038907181.1 protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 [Benincasa hispida]

1.1e-48

77.92

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Query:  IDVPLSLQSCSKTVILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQDERTPLGQVGGEYFAEDPTWSSGRRWKPVD-LKDIDTDRLL
        ID+PL LQSCSK VILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQDE   L                GR  +    L DIDTDRLL
Subjt:  IDVPLSLQSCSKTVILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQDERTPLGQVGGEYFAEDPTWSSGRRWKPVD-LKDIDTDRLL

Query:  EKDLVTLDEAVRSANNAVLLAINSVSIVKSEMLIKFVDEPQNDVKELDVIDVME
        EKDLVTLDEAVRSANNAVLLAINS+SIVKSEMLIK V EPQNDVKEL VIDVME
Subjt:  EKDLVTLDEAVRSANNAVLLAINSVSIVKSEMLIKFVDEPQNDVKELDVIDVME

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CRX6 protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 isoform X1

6.0e-48

75.48

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Query:  MIDVPLSLQSCSKTVILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQDERTPLGQVGGEYFAEDPTWSSGRRWKPVD-LKDIDTDRL
        MIDVPLSL SC K VILVVSAGYGFDY AAVD+LRTIRSANGFTVTIVLKPFSFEGKRRQDE   L                GR  +    L DIDTDRL
Subjt:  MIDVPLSLQSCSKTVILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQDERTPLGQVGGEYFAEDPTWSSGRRWKPVD-LKDIDTDRL

Query:  LEKDLVTLDEAVRSANNAVLLAINSVSIVKSEMLIKFVDEPQNDVKELDVIDVME
        LEKDLVTLD+AVRSANNAVLLAINS+SIVKSEM+IKFVDEPQND+KEL V+DVME
Subjt:  LEKDLVTLDEAVRSANNAVLLAINSVSIVKSEMLIKFVDEPQNDVKELDVIDVME

A0A1S3CS57 protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 isoform X3

6.0e-48

75.48

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Query:  MIDVPLSLQSCSKTVILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQDERTPLGQVGGEYFAEDPTWSSGRRWKPVD-LKDIDTDRL
        MIDVPLSL SC K VILVVSAGYGFDY AAVD+LRTIRSANGFTVTIVLKPFSFEGKRRQDE   L                GR  +    L DIDTDRL
Subjt:  MIDVPLSLQSCSKTVILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQDERTPLGQVGGEYFAEDPTWSSGRRWKPVD-LKDIDTDRL

Query:  LEKDLVTLDEAVRSANNAVLLAINSVSIVKSEMLIKFVDEPQNDVKELDVIDVME
        LEKDLVTLD+AVRSANNAVLLAINS+SIVKSEM+IKFVDEPQND+KEL V+DVME
Subjt:  LEKDLVTLDEAVRSANNAVLLAINSVSIVKSEMLIKFVDEPQNDVKELDVIDVME

A0A6J1CZD7 protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3

1.2e-45

72.61

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Query:  MIDVPLSLQSCSKTVILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQDERTPLGQVGGEYFAEDPTWSSGRRWKPVDLKDIDTDRLL
        M+DVPLSLQSCSK VILVVSAGYG DYSAAVDILRTIRSANGFTVTIVLKPFSFEG+RRQDE   L  VG     E  ++          L DIDT RLL
Subjt:  MIDVPLSLQSCSKTVILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQDERTPLGQVGGEYFAEDPTWSSGRRWKPVDLKDIDTDRLL

Query:  EKDLVTLDEAVRSANNAVLLAINSVSIVKSEMLIKFVDEPQNDVKEL---DVIDVME
        EKDLVTLDEAVRSANNAVLLAINS+SI+KSE LIKF++EPQND+KEL   +VI ++E
Subjt:  EKDLVTLDEAVRSANNAVLLAINSVSIVKSEMLIKFVDEPQNDVKEL---DVIDVME

A0A6J1FFA3 protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3

2.7e-48

74.84

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Query:  MIDVPLSLQSCSKTVILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQDERTPLGQVGGEYFAEDPTWSSGRRWKPVD-LKDIDTDRL
        MIDVPLSLQSCSK VILVVSAGYG DYSAAVDILRT+RSANGFTVTIVLKPFSFEG+RRQDE   L                GR  +    L DIDTDRL
Subjt:  MIDVPLSLQSCSKTVILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQDERTPLGQVGGEYFAEDPTWSSGRRWKPVD-LKDIDTDRL

Query:  LEKDLVTLDEAVRSANNAVLLAINSVSIVKSEMLIKFVDEPQNDVKELDVIDVME
        LEKDLVTLDEAVRSAN+AVL+AINS+SI+KSEML KF+DEPQN VKEL VIDVME
Subjt:  LEKDLVTLDEAVRSANNAVLLAINSVSIVKSEMLIKFVDEPQNDVKELDVIDVME

A0A6J1JRB9 protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3

4.1e-49

76.62

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Query:  MIDVPLSLQSCSKTVILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQDERTPLGQVGGEYFAEDPTWSSGRRWKPVDLKDIDTDRLL
        MIDVPLSLQSCSK VILVVSAGYG DYSAAVDILRT+RSANGFTVTIVLKPFSFEG+RRQDE   L  VG     E  ++          L DIDTDRLL
Subjt:  MIDVPLSLQSCSKTVILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQDERTPLGQVGGEYFAEDPTWSSGRRWKPVDLKDIDTDRLL

Query:  EKDLVTLDEAVRSANNAVLLAINSVSIVKSEMLIKFVDEPQNDVKELDVIDVME
        EKDLVTLDEAVRSANNAVL+AINS+SI+KSEML KF+DEPQN VKEL VIDVME
Subjt:  EKDLVTLDEAVRSANNAVLLAINSVSIVKSEMLIKFVDEPQNDVKELDVIDVME

SwissProt top hits

e value

%identity

Alignment

Q6F6B5 Protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3

1.9e-19

42.76

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Query:  LQSCSKTVILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQDERTPLGQVGGEYFAEDPTWSSGRRWKPVDLKDIDTDRLLEKDLVTL
        LQS  +  ILV SAGYG D   A++IL  +RS     V ++LKPFSFEG++R +E   L +   ++                   DID + LL+KDLVTL
Subjt:  LQSCSKTVILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQDERTPLGQVGGEYFAEDPTWSSGRRWKPVDLKDIDTDRLLEKDLVTL

Query:  DEAVRSANNAVLLAINSVSIVKSEMLIKFVDEPQNDVKELDVIDV
        DEA+R+ANNAV +AIN+ S + S M   F+D    D+KEL+  +V
Subjt:  DEAVRSANNAVLLAINSVSIVKSEMLIKFVDEPQNDVKELDVIDV

Arabidopsis top hits

e value

%identity

Alignment

AT1G75010.1 GTP binding

1.4e-20

42.76

Show/hide

Query:  LQSCSKTVILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQDERTPLGQVGGEYFAEDPTWSSGRRWKPVDLKDIDTDRLLEKDLVTL
        LQS  +  ILV SAGYG D   A++IL  +RS     V ++LKPFSFEG++R +E   L +   ++                   DID + LL+KDLVTL
Subjt:  LQSCSKTVILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQDERTPLGQVGGEYFAEDPTWSSGRRWKPVDLKDIDTDRLLEKDLVTL

Query:  DEAVRSANNAVLLAINSVSIVKSEMLIKFVDEPQNDVKELDVIDV
        DEA+R+ANNAV +AIN+ S + S M   F+D    D+KEL+  +V
Subjt:  DEAVRSANNAVLLAINSVSIVKSEMLIKFVDEPQNDVKELDVIDV

Sequences

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CDS sequence

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ATGATTGACGTTCCACTGTCACTACAATCATGTTCGAAGACTGTTATACTTGTGGTTAGTGCTGGATATGGCTTTGATTACTCTGCAGCTGTTGATATCCTTAGAACCAT
AAGATCTGCAAATGGATTTACTGTTACAATTGTCTTAAAACCTTTTAGCTTTGAAGGGAAAAGGCGCCAGGATGAGAGGACCCCACTTGGTCAAGTGGGAGGAGAATACT
TTGCAGAGGACCCCACTTGGTCAAGTGGGAGGAGGTGGAAGCCTGTGGATCTAAAAGATATTGACACCGATAGACTACTTGAAAAGGACTTGGTGACTCTTGATGAGGCT
GTGAGATCTGCAAATAATGCTGTCTTGTTGGCTATAAATTCGGTATCCATTGTCAAGTCTGAGATGTTAATAAAGTTTGTAGATGAACCTCAAAATGATGTGAAAGAGCT
TGATGTTATAGACGTCATGGAAAGGAGTTCTGGAATCCAGCATGAGCCAAGATGTCTAAAGGAAATGGCACTTGTCTTGGTGAAAGAGGGAGGAGCTAATCTTCTCTCCT
TCATATGGTATTCCCTCTTGAGAATGGATAGAGATGAGAAGTTTAATGCAGAATGGAGATAA

mRNA sequence

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Protein sequence

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MIDVPLSLQSCSKTVILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQDERTPLGQVGGEYFAEDPTWSSGRRWKPVDLKDIDTDRLLEKDLVTLDEA
VRSANNAVLLAINSVSIVKSEMLIKFVDEPQNDVKELDVIDVMERSSGIQHEPRCLKEMALVLVKEGGANLLSFIWYSLLRMDRDEKFNAEWR

HG10009612 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome