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HG10009639 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10009639
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPeptidyl-prolyl cis-trans isomerase
Genome locationChr06:8410231..8411912
RNA-Seq ExpressionHG10009639
SyntenyHG10009639
Gene Ontology termsGO:0000413 - protein peptidyl-prolyl isomerization (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0003755 - peptidyl-prolyl cis-trans isomerase activity (molecular function)
InterPro domainsIPR002130 - Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain
IPR029000 - Cyclophilin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB44479.1 Peptidyl-prolyl cis-trans isomerase [Morus notabilis]1.2e-2481.33Show/hide
Query:  QDV-ELQAEVSTKCFFDVEIGGEP----GTGGVSIYGSSFRDENFSLKHVGPGVLSMANAGPNTNGSQFFICTVK
        QDV ELQ+ V+TKCFFD+EIGGEP    GTGGVSIYGS F DEN  LKHVGPGVLSMANAGP+TNGSQFFICTVK
Subjt:  QDV-ELQAEVSTKCFFDVEIGGEP----GTGGVSIYGSSFRDENFSLKHVGPGVLSMANAGPNTNGSQFFICTVK

KAF6163475.1 hypothetical protein GIB67_029324 [Kingdonia uniflora]1.6e-2460.58Show/hide
Query:  SLSQDVELQAEVSTKCFFDVEIGGEP-------------------------------GTGGVSIYGSSFRDENFSLKHVGPGVLSMANAGPNTNGSQFFI
        +++QDVELQAEV+TKCFFDVE+GGEP                               GTGG SIYGS F DENF LKH GPGVLSMANAGPNTNGSQFFI
Subjt:  SLSQDVELQAEVSTKCFFDVEIGGEP-------------------------------GTGGVSIYGSSFRDENFSLKHVGPGVLSMANAGPNTNGSQFFI

Query:  CTVK
        CTVK
Subjt:  CTVK

KAG8486214.1 hypothetical protein CXB51_019617 [Gossypium anomalum]1.0e-2362Show/hide
Query:  SLSQDVELQAEVSTKCFFDVEIGGE---------------------------PGTGGVSIYGSSFRDENFSLKHVGPGVLSMANAGPNTNGSQFFICTVK
        S++ DVELQA+V+TKCFFDVEIGGE                            GTGG+SIYGS F DE+F+LKHVGPGVLSMANAGPNTNGSQFFICTVK
Subjt:  SLSQDVELQAEVSTKCFFDVEIGGE---------------------------PGTGGVSIYGSSFRDENFSLKHVGPGVLSMANAGPNTNGSQFFICTVK

TYJ98147.1 peptidyl-prolyl cis-trans isomerase A1 [Cucumis melo var. makuwa]6.1e-2451.06Show/hide
Query:  ASVVPMSVLGTLPSLSQDVELQAEVSTKCFFDVEIGGEP-------------------------------------------------------GTGGVS
        AS +    L  + S ++DVELQAEVSTKCFFDVEIGGEP                                                       GTGGVS
Subjt:  ASVVPMSVLGTLPSLSQDVELQAEVSTKCFFDVEIGGEP-------------------------------------------------------GTGGVS

Query:  IYGSSFRDENFSLKHVGPGVLSMANAGPNTNGSQFFICTVK
        IYG SFRDENFSLKHVGPGVLSMANAGPNTNGSQFFICTVK
Subjt:  IYGSSFRDENFSLKHVGPGVLSMANAGPNTNGSQFFICTVK

XP_038875165.1 peptidyl-prolyl cis-trans isomerase A1 [Benincasa hispida]2.7e-2453.91Show/hide
Query:  SLSQDVELQAEVSTKCFFDVEIGGEP-------------------------------------------------------GTGGVSIYGSSFRDENFSL
        S ++DVELQAEVSTKCFFD+EIGGEP                                                       GTGGVSIYGSSFRDENFSL
Subjt:  SLSQDVELQAEVSTKCFFDVEIGGEP-------------------------------------------------------GTGGVSIYGSSFRDENFSL

Query:  KHVGPGVLSMANAGPNTNGSQFFICTVK
        KHVGPGVLSMANAGPNTNGSQFFICTVK
Subjt:  KHVGPGVLSMANAGPNTNGSQFFICTVK

TrEMBL top hitse value%identityAlignment
A0A0B0NIZ5 Peptidyl-prolyl cis-trans isomerase6.6e-2462Show/hide
Query:  SLSQDVELQAEVSTKCFFDVEIGGE---------------------------PGTGGVSIYGSSFRDENFSLKHVGPGVLSMANAGPNTNGSQFFICTVK
        S+  DVELQA+V+TKCFFDVEIGGE                            GTGG+SIYGS F DE+F+LKHVGPGVLSMANAGPNTNGSQFFICTVK
Subjt:  SLSQDVELQAEVSTKCFFDVEIGGE---------------------------PGTGGVSIYGSSFRDENFSLKHVGPGVLSMANAGPNTNGSQFFICTVK

A0A2N9FM92 Peptidyl-prolyl cis-trans isomerase5.0e-2459.62Show/hide
Query:  SLSQDVELQAEVSTKCFFDVEIGGEP-------------------------------GTGGVSIYGSSFRDENFSLKHVGPGVLSMANAGPNTNGSQFFI
        S++ +VELQA+V+TKCFFDVEIGGEP                               GTGG+SIYGS F DE+FSLKHVGPGVLSMANAGP+TNGSQFFI
Subjt:  SLSQDVELQAEVSTKCFFDVEIGGEP-------------------------------GTGGVSIYGSSFRDENFSLKHVGPGVLSMANAGPNTNGSQFFI

Query:  CTVK
        CTVK
Subjt:  CTVK

A0A5D3BG99 Peptidyl-prolyl cis-trans isomerase3.0e-2451.06Show/hide
Query:  ASVVPMSVLGTLPSLSQDVELQAEVSTKCFFDVEIGGEP-------------------------------------------------------GTGGVS
        AS +    L  + S ++DVELQAEVSTKCFFDVEIGGEP                                                       GTGGVS
Subjt:  ASVVPMSVLGTLPSLSQDVELQAEVSTKCFFDVEIGGEP-------------------------------------------------------GTGGVS

Query:  IYGSSFRDENFSLKHVGPGVLSMANAGPNTNGSQFFICTVK
        IYG SFRDENFSLKHVGPGVLSMANAGPNTNGSQFFICTVK
Subjt:  IYGSSFRDENFSLKHVGPGVLSMANAGPNTNGSQFFICTVK

A0A7J7N8J8 Peptidyl-prolyl cis-trans isomerase7.8e-2560.58Show/hide
Query:  SLSQDVELQAEVSTKCFFDVEIGGEP-------------------------------GTGGVSIYGSSFRDENFSLKHVGPGVLSMANAGPNTNGSQFFI
        +++QDVELQAEV+TKCFFDVE+GGEP                               GTGG SIYGS F DENF LKH GPGVLSMANAGPNTNGSQFFI
Subjt:  SLSQDVELQAEVSTKCFFDVEIGGEP-------------------------------GTGGVSIYGSSFRDENFSLKHVGPGVLSMANAGPNTNGSQFFI

Query:  CTVK
        CTVK
Subjt:  CTVK

W9QYH5 Peptidyl-prolyl cis-trans isomerase6.0e-2581.33Show/hide
Query:  QDV-ELQAEVSTKCFFDVEIGGEP----GTGGVSIYGSSFRDENFSLKHVGPGVLSMANAGPNTNGSQFFICTVK
        QDV ELQ+ V+TKCFFD+EIGGEP    GTGGVSIYGS F DEN  LKHVGPGVLSMANAGP+TNGSQFFICTVK
Subjt:  QDV-ELQAEVSTKCFFDVEIGGEP----GTGGVSIYGSSFRDENFSLKHVGPGVLSMANAGPNTNGSQFFICTVK

SwissProt top hitse value%identityAlignment
P29117 Peptidyl-prolyl cis-trans isomerase F, mitochondrial2.3e-1889.36Show/hide
Query:  GTGGVSIYGSSFRDENFSLKHVGPGVLSMANAGPNTNGSQFFICTVK
        GTGG SIYGS F DENF+LKHVGPGVLSMANAGPNTNGSQFFICT+K
Subjt:  GTGGVSIYGSSFRDENFSLKHVGPGVLSMANAGPNTNGSQFFICTVK

P30405 Peptidyl-prolyl cis-trans isomerase F, mitochondrial2.3e-1889.36Show/hide
Query:  GTGGVSIYGSSFRDENFSLKHVGPGVLSMANAGPNTNGSQFFICTVK
        GTGG SIYGS F DENF+LKHVGPGVLSMANAGPNTNGSQFFICT+K
Subjt:  GTGGVSIYGSSFRDENFSLKHVGPGVLSMANAGPNTNGSQFFICTVK

P34791 Peptidyl-prolyl cis-trans isomerase CYP20-3, chloroplastic6.1e-1941.86Show/hide
Query:  VELQAEVSTKCFFDVEIGGE-------------------------------------------------------PGTGGVSIYGSSFRDENFSLKHVGP
        +E QA+V+ K +FDVEIGGE                                                        GTGG+SIYG+ F DENF+LKH GP
Subjt:  VELQAEVSTKCFFDVEIGGE-------------------------------------------------------PGTGGVSIYGSSFRDENFSLKHVGP

Query:  GVLSMANAGPNTNGSQFFICTVKVIQLQH
        G+LSMANAGPNTNGSQFFICTVK   L +
Subjt:  GVLSMANAGPNTNGSQFFICTVKVIQLQH

Q41651 Peptidyl-prolyl cis-trans isomerase, chloroplastic2.1e-1946.28Show/hide
Query:  ELQAEVSTKCFFDVEIGGEP-------------------------------------------------------GTGGVSIYGSSFRDENFSLKHVGPG
        ELQA+V++K FFD+EIGGE                                                        GTGGVSIYGS F DE+F LKHVGPG
Subjt:  ELQAEVSTKCFFDVEIGGEP-------------------------------------------------------GTGGVSIYGSSFRDENFSLKHVGPG

Query:  VLSMANAGPNTNGSQFFICTV
        VLSMANAGPNTNGSQFFICTV
Subjt:  VLSMANAGPNTNGSQFFICTV

Q99KR7 Peptidyl-prolyl cis-trans isomerase F, mitochondrial3.0e-1889.36Show/hide
Query:  GTGGVSIYGSSFRDENFSLKHVGPGVLSMANAGPNTNGSQFFICTVK
        GTGG SIYGS F DENF+LKHVGPGVLSMANAGPNTNGSQFFICT+K
Subjt:  GTGGVSIYGSSFRDENFSLKHVGPGVLSMANAGPNTNGSQFFICTVK

Arabidopsis top hitse value%identityAlignment
AT3G62030.1 rotamase CYP 44.4e-2041.86Show/hide
Query:  VELQAEVSTKCFFDVEIGGE-------------------------------------------------------PGTGGVSIYGSSFRDENFSLKHVGP
        +E QA+V+ K +FDVEIGGE                                                        GTGG+SIYG+ F DENF+LKH GP
Subjt:  VELQAEVSTKCFFDVEIGGE-------------------------------------------------------PGTGGVSIYGSSFRDENFSLKHVGP

Query:  GVLSMANAGPNTNGSQFFICTVKVIQLQH
        G+LSMANAGPNTNGSQFFICTVK   L +
Subjt:  GVLSMANAGPNTNGSQFFICTVKVIQLQH

AT3G62030.2 rotamase CYP 44.4e-2041.86Show/hide
Query:  VELQAEVSTKCFFDVEIGGE-------------------------------------------------------PGTGGVSIYGSSFRDENFSLKHVGP
        +E QA+V+ K +FDVEIGGE                                                        GTGG+SIYG+ F DENF+LKH GP
Subjt:  VELQAEVSTKCFFDVEIGGE-------------------------------------------------------PGTGGVSIYGSSFRDENFSLKHVGP

Query:  GVLSMANAGPNTNGSQFFICTVKVIQLQH
        G+LSMANAGPNTNGSQFFICTVK   L +
Subjt:  GVLSMANAGPNTNGSQFFICTVKVIQLQH

AT3G62030.3 rotamase CYP 44.4e-2041.86Show/hide
Query:  VELQAEVSTKCFFDVEIGGE-------------------------------------------------------PGTGGVSIYGSSFRDENFSLKHVGP
        +E QA+V+ K +FDVEIGGE                                                        GTGG+SIYG+ F DENF+LKH GP
Subjt:  VELQAEVSTKCFFDVEIGGE-------------------------------------------------------PGTGGVSIYGSSFRDENFSLKHVGP

Query:  GVLSMANAGPNTNGSQFFICTVKVIQLQH
        G+LSMANAGPNTNGSQFFICTVK   L +
Subjt:  GVLSMANAGPNTNGSQFFICTVKVIQLQH

AT5G13120.1 cyclophilin 20-28.2e-1982.98Show/hide
Query:  GTGGVSIYGSSFRDENFSLKHVGPGVLSMANAGPNTNGSQFFICTVK
        GTGG S+YG +F+DENF L HVGPGVLSMANAGPNTNGSQFFICT+K
Subjt:  GTGGVSIYGSSFRDENFSLKHVGPGVLSMANAGPNTNGSQFFICTVK

AT5G13120.2 cyclophilin 20-28.2e-1982.98Show/hide
Query:  GTGGVSIYGSSFRDENFSLKHVGPGVLSMANAGPNTNGSQFFICTVK
        GTGG S+YG +F+DENF L HVGPGVLSMANAGPNTNGSQFFICT+K
Subjt:  GTGGVSIYGSSFRDENFSLKHVGPGVLSMANAGPNTNGSQFFICTVK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTGTAGTCCCAATGAGTGTGTTGGGCACACTGCCTTCTCTTTCACAGGATGTAGAGCTGCAAGCAGAAGTCTCAACAAAGTGCTTTTTCGATGTAGAAATTGG
AGGTGAACCGGGAACTGGAGGTGTTAGTATCTATGGTTCCAGTTTTCGAGACGAGAATTTTTCATTGAAGCATGTAGGACCTGGTGTACTTAGCATGGCCAATGCTGGAC
CTAATACTAATGGAAGCCAATTCTTCATCTGTACTGTAAAGGTAATTCAACTTCAGCATTCTATTCTTTCTGCAGATTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTGTAGTCCCAATGAGTGTGTTGGGCACACTGCCTTCTCTTTCACAGGATGTAGAGCTGCAAGCAGAAGTCTCAACAAAGTGCTTTTTCGATGTAGAAATTGG
AGGTGAACCGGGAACTGGAGGTGTTAGTATCTATGGTTCCAGTTTTCGAGACGAGAATTTTTCATTGAAGCATGTAGGACCTGGTGTACTTAGCATGGCCAATGCTGGAC
CTAATACTAATGGAAGCCAATTCTTCATCTGTACTGTAAAGGTAATTCAACTTCAGCATTCTATTCTTTCTGCAGATTATTGA
Protein sequenceShow/hide protein sequence
MASVVPMSVLGTLPSLSQDVELQAEVSTKCFFDVEIGGEPGTGGVSIYGSSFRDENFSLKHVGPGVLSMANAGPNTNGSQFFICTVKVIQLQHSILSADY