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HG10009653 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10009653
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionIleal sodium/bile acid cotransporter, putative
Genome locationChr06:8533898..8534383
RNA-Seq ExpressionHG10009653
SyntenyHG10009653
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050244.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa]1.4e-4666.46Show/hide
Query:  MAAATPHETSLDMNQLYSFITAVTKRNPGISSCTWG--ASDCLPIHIKMERP-PVNSPPQLGKIFLSLTFQAILALFFSLSSSSPPLPTVLFGAVMLIGF
        MA   PHE SLDMN+LYSFITAVT RNPGISSCTWG  ASDCLPI+IKM+RP PVNS PQ G  F+S  FQAIL LF +L  S PPL + L G VML  F
Subjt:  MAAATPHETSLDMNQLYSFITAVTKRNPGISSCTWG--ASDCLPIHIKMERP-PVNSPPQLGKIFLSLTFQAILALFFSLSSSSPPLPTVLFGAVMLIGF

Query:  AVSFAGVLLQNAFPKIALLLEKLGALFAAIGICIIATLLVHPNLAWICWLACGFFILTFIISFK
          SF GVLLQ  FPKIA LL+  GAL AAIG+CI+ + L+HPNL WI WLACG  +  FI SFK
Subjt:  AVSFAGVLLQNAFPKIALLLEKLGALFAAIGICIIATLLVHPNLAWICWLACGFFILTFIISFK

KAA0050246.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa]1.7e-3658.82Show/hide
Query:  MNQLYSFITAVTKRNPGISSCTWGASDCLPIHIKMERP-PVNSPP---QLGKIFLSLTFQAILALFFSLSSSSPPLPTVLFGAVMLIGFAVSFAGVLLQN
        MN+LYSFITA+ +RNP I+S        LPI I M+RP P NS      +GK  L LTFQA+LALF +  +SSPPL T LF A +LI FAVSFAG+ LQN
Subjt:  MNQLYSFITAVTKRNPGISSCTWGASDCLPIHIKMERP-PVNSPP---QLGKIFLSLTFQAILALFFSLSSSSPPLPTVLFGAVMLIGFAVSFAGVLLQN

Query:  AFPKIALLLEKLGALFAAIGICIIATLLVHPNLAWICWLACGFFILTFIISFK
         FP+IALL EK+GAL AAIG+CI+A+LL+H N AWI WLA GF ++ F++SF+
Subjt:  AFPKIALLLEKLGALFAAIGICIIATLLVHPNLAWICWLACGFFILTFIISFK

KGN49803.1 hypothetical protein Csa_004681 [Cucumis sativus]5.6e-3554.32Show/hide
Query:  ATPHETSLDMNQLYSFITAVTKRNPGISSCTWGASDCLPIHIKME-RPPVNSPP---QLGKIFLSLTFQAILALFFSLSSSSPPLPTVLFGAVMLIGFAV
        ++  + S+DMN LYS IT++ +RNP I+         LPI I M+   P NS      +G   L LTFQA+LALF + S+SSPPL T LFGA +LI FAV
Subjt:  ATPHETSLDMNQLYSFITAVTKRNPGISSCTWGASDCLPIHIKME-RPPVNSPP---QLGKIFLSLTFQAILALFFSLSSSSPPLPTVLFGAVMLIGFAV

Query:  SFAGVLLQNAFPKIALLLEKLGALFAAIGICIIATLLVHPNLAWICWLACGFFILTFIISFK
        SF GV LQ+ FP+IALL EK+GAL AAIG+CI+A+LL+H N AWI WLACGF ++ F++SF+
Subjt:  SFAGVLLQNAFPKIALLLEKLGALFAAIGICIIATLLVHPNLAWICWLACGFFILTFIISFK

KGN49806.1 hypothetical protein Csa_004683 [Cucumis sativus]4.8e-4767.27Show/hide
Query:  MAAATPHETSLDMNQLYSFITAVTKRNPGISSCTWG--ASDCLPIHIKMERP-PVNSPPQLGKIFLSLTFQAILALFFSLS-SSSPPLPTVLFGAVMLIG
        MA   PHE SLDMN+L S I AVT RNPGISSCTWG  ASDCLPI+IKM+RP PVNS PQ G  FLSLTFQAI+ LF SL+ SSS PLP+ LF AVML  
Subjt:  MAAATPHETSLDMNQLYSFITAVTKRNPGISSCTWG--ASDCLPIHIKMERP-PVNSPPQLGKIFLSLTFQAILALFFSLS-SSSPPLPTVLFGAVMLIG

Query:  FAVSFAGVLLQNAFPKIALLLEKLGALFAAIGICIIATLLVHPNLAWICWLACGFFILTFIISFK
        F  S+ GV+LQ  FPK A LL+  GALFAAIG CII +LL++PN  WICWLA G  +  FIISFK
Subjt:  FAVSFAGVLLQNAFPKIALLLEKLGALFAAIGICIIATLLVHPNLAWICWLACGFFILTFIISFK

KGN49808.1 hypothetical protein Csa_004650 [Cucumis sativus]1.4e-3352.44Show/hide
Query:  AATPHETSLDMNQLYSFITAVTKRNPGISSCTWGASDCLPIHIKMERPP---VNSPPQLGKIFLSLTFQAILALFFSL-SSSSPPLPTVLFGAVMLIGFA
        A+T H+TSLDM+   SFI  +++RN G+  C    S+CLP+ I+M++ P    +S  +LGKI LSL+FQA+LALF S   +S PPL    F A + I FA
Subjt:  AATPHETSLDMNQLYSFITAVTKRNPGISSCTWGASDCLPIHIKMERPP---VNSPPQLGKIFLSLTFQAILALFFSL-SSSSPPLPTVLFGAVMLIGFA

Query:  VSFAGVLLQNAFPKIALLLEKLGALFAAIGICIIAT-LLVHPNLAWICWLACGFFILTFIISFK
        VSFA + L N+FP+ A L EK+GALF+A G+C IA+ LLVH N AWICW+AC F I+ F +SFK
Subjt:  VSFAGVLLQNAFPKIALLLEKLGALFAAIGICIIAT-LLVHPNLAWICWLACGFFILTFIISFK

TrEMBL top hitse value%identityAlignment
A0A0A0KJN8 Uncharacterized protein2.7e-3554.32Show/hide
Query:  ATPHETSLDMNQLYSFITAVTKRNPGISSCTWGASDCLPIHIKME-RPPVNSPP---QLGKIFLSLTFQAILALFFSLSSSSPPLPTVLFGAVMLIGFAV
        ++  + S+DMN LYS IT++ +RNP I+         LPI I M+   P NS      +G   L LTFQA+LALF + S+SSPPL T LFGA +LI FAV
Subjt:  ATPHETSLDMNQLYSFITAVTKRNPGISSCTWGASDCLPIHIKME-RPPVNSPP---QLGKIFLSLTFQAILALFFSLSSSSPPLPTVLFGAVMLIGFAV

Query:  SFAGVLLQNAFPKIALLLEKLGALFAAIGICIIATLLVHPNLAWICWLACGFFILTFIISFK
        SF GV LQ+ FP+IALL EK+GAL AAIG+CI+A+LL+H N AWI WLACGF ++ F++SF+
Subjt:  SFAGVLLQNAFPKIALLLEKLGALFAAIGICIIATLLVHPNLAWICWLACGFFILTFIISFK

A0A0A0KJP2 Uncharacterized protein6.6e-3452.44Show/hide
Query:  AATPHETSLDMNQLYSFITAVTKRNPGISSCTWGASDCLPIHIKMERPP---VNSPPQLGKIFLSLTFQAILALFFSL-SSSSPPLPTVLFGAVMLIGFA
        A+T H+TSLDM+   SFI  +++RN G+  C    S+CLP+ I+M++ P    +S  +LGKI LSL+FQA+LALF S   +S PPL    F A + I FA
Subjt:  AATPHETSLDMNQLYSFITAVTKRNPGISSCTWGASDCLPIHIKMERPP---VNSPPQLGKIFLSLTFQAILALFFSL-SSSSPPLPTVLFGAVMLIGFA

Query:  VSFAGVLLQNAFPKIALLLEKLGALFAAIGICIIAT-LLVHPNLAWICWLACGFFILTFIISFK
        VSFA + L N+FP+ A L EK+GALF+A G+C IA+ LLVH N AWICW+AC F I+ F +SFK
Subjt:  VSFAGVLLQNAFPKIALLLEKLGALFAAIGICIIAT-LLVHPNLAWICWLACGFFILTFIISFK

A0A0A0KQ03 Uncharacterized protein2.3e-4767.27Show/hide
Query:  MAAATPHETSLDMNQLYSFITAVTKRNPGISSCTWG--ASDCLPIHIKMERP-PVNSPPQLGKIFLSLTFQAILALFFSLS-SSSPPLPTVLFGAVMLIG
        MA   PHE SLDMN+L S I AVT RNPGISSCTWG  ASDCLPI+IKM+RP PVNS PQ G  FLSLTFQAI+ LF SL+ SSS PLP+ LF AVML  
Subjt:  MAAATPHETSLDMNQLYSFITAVTKRNPGISSCTWG--ASDCLPIHIKMERP-PVNSPPQLGKIFLSLTFQAILALFFSLS-SSSPPLPTVLFGAVMLIG

Query:  FAVSFAGVLLQNAFPKIALLLEKLGALFAAIGICIIATLLVHPNLAWICWLACGFFILTFIISFK
        F  S+ GV+LQ  FPK A LL+  GALFAAIG CII +LL++PN  WICWLA G  +  FIISFK
Subjt:  FAVSFAGVLLQNAFPKIALLLEKLGALFAAIGICIIATLLVHPNLAWICWLACGFFILTFIISFK

A0A5A7U7U1 Putative Ileal sodium/bile acid cotransporter8.4e-3758.82Show/hide
Query:  MNQLYSFITAVTKRNPGISSCTWGASDCLPIHIKMERP-PVNSPP---QLGKIFLSLTFQAILALFFSLSSSSPPLPTVLFGAVMLIGFAVSFAGVLLQN
        MN+LYSFITA+ +RNP I+S        LPI I M+RP P NS      +GK  L LTFQA+LALF +  +SSPPL T LF A +LI FAVSFAG+ LQN
Subjt:  MNQLYSFITAVTKRNPGISSCTWGASDCLPIHIKMERP-PVNSPP---QLGKIFLSLTFQAILALFFSLSSSSPPLPTVLFGAVMLIGFAVSFAGVLLQN

Query:  AFPKIALLLEKLGALFAAIGICIIATLLVHPNLAWICWLACGFFILTFIISFK
         FP+IALL EK+GAL AAIG+CI+A+LL+H N AWI WLA GF ++ F++SF+
Subjt:  AFPKIALLLEKLGALFAAIGICIIATLLVHPNLAWICWLACGFFILTFIISFK

A0A5D3BEH8 Putative Ileal sodium/bile acid cotransporter6.8e-4766.46Show/hide
Query:  MAAATPHETSLDMNQLYSFITAVTKRNPGISSCTWG--ASDCLPIHIKMERP-PVNSPPQLGKIFLSLTFQAILALFFSLSSSSPPLPTVLFGAVMLIGF
        MA   PHE SLDMN+LYSFITAVT RNPGISSCTWG  ASDCLPI+IKM+RP PVNS PQ G  F+S  FQAIL LF +L  S PPL + L G VML  F
Subjt:  MAAATPHETSLDMNQLYSFITAVTKRNPGISSCTWG--ASDCLPIHIKMERP-PVNSPPQLGKIFLSLTFQAILALFFSLSSSSPPLPTVLFGAVMLIGF

Query:  AVSFAGVLLQNAFPKIALLLEKLGALFAAIGICIIATLLVHPNLAWICWLACGFFILTFIISFK
          SF GVLLQ  FPKIA LL+  GAL AAIG+CI+ + L+HPNL WI WLACG  +  FI SFK
Subjt:  AVSFAGVLLQNAFPKIALLLEKLGALFAAIGICIIATLLVHPNLAWICWLACGFFILTFIISFK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCAGCTACTCCACATGAAACCTCCCTAGATATGAATCAACTCTATTCCTTCATCACTGCAGTCACAAAGAGAAATCCTGGAATAAGCAGTTGTACCTGGGGAGC
ATCAGATTGCCTGCCAATTCACATCAAAATGGAGAGGCCACCAGTCAACAGTCCCCCTCAGCTTGGGAAGATATTTCTTAGTCTAACTTTTCAGGCAATTTTAGCCTTGT
TTTTCAGCTTATCCTCTTCATCTCCTCCATTACCTACTGTTCTGTTTGGGGCTGTTATGTTGATTGGCTTTGCAGTTTCATTTGCTGGAGTTCTCCTTCAAAATGCATTC
CCAAAAATTGCACTTCTGTTGGAAAAGTTGGGTGCTCTGTTTGCTGCAATTGGTATCTGCATCATAGCAACTCTTTTAGTCCATCCAAACCTTGCTTGGATCTGTTGGCT
AGCATGTGGCTTCTTCATACTAACCTTTATTATATCATTCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCAGCTACTCCACATGAAACCTCCCTAGATATGAATCAACTCTATTCCTTCATCACTGCAGTCACAAAGAGAAATCCTGGAATAAGCAGTTGTACCTGGGGAGC
ATCAGATTGCCTGCCAATTCACATCAAAATGGAGAGGCCACCAGTCAACAGTCCCCCTCAGCTTGGGAAGATATTTCTTAGTCTAACTTTTCAGGCAATTTTAGCCTTGT
TTTTCAGCTTATCCTCTTCATCTCCTCCATTACCTACTGTTCTGTTTGGGGCTGTTATGTTGATTGGCTTTGCAGTTTCATTTGCTGGAGTTCTCCTTCAAAATGCATTC
CCAAAAATTGCACTTCTGTTGGAAAAGTTGGGTGCTCTGTTTGCTGCAATTGGTATCTGCATCATAGCAACTCTTTTAGTCCATCCAAACCTTGCTTGGATCTGTTGGCT
AGCATGTGGCTTCTTCATACTAACCTTTATTATATCATTCAAGTGA
Protein sequenceShow/hide protein sequence
MAAATPHETSLDMNQLYSFITAVTKRNPGISSCTWGASDCLPIHIKMERPPVNSPPQLGKIFLSLTFQAILALFFSLSSSSPPLPTVLFGAVMLIGFAVSFAGVLLQNAF
PKIALLLEKLGALFAAIGICIIATLLVHPNLAWICWLACGFFILTFIISFK