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HG10009654 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10009654
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionIleal sodium/bile acid cotransporter, putative
Genome locationChr06:8543711..8544202
RNA-Seq ExpressionHG10009654
SyntenyHG10009654
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050246.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa]1.8e-4166.67Show/hide
Query:  MNALSSFIPTINQRSYGISIFCTPSDCLPICIRMQQ-SPQATASSPQNLAKTILGLTFQAILALFISSPTSSPPLLTHLFGAAVLISFAVSFAALFLHNS
        MN L SFI  IN+R+  I       + LPICI MQ+ SP  ++ +  N+ KTILGLTFQA+LALFI+SP SSPPLLTHLF AAVLISFAVSFA +FL N 
Subjt:  MNALSSFIPTINQRSYGISIFCTPSDCLPICIRMQQ-SPQATASSPQNLAKTILGLTFQAILALFISSPTSSPPLLTHLFGAAVLISFAVSFAALFLHNS

Query:  FPRTARLFEKIGALFAGIGVCIIASFLLVHQNFAWICWLACGFSFIVFVLSFK
        FPR A LFEKIGAL A IGVCI+AS LL+HQNFAWI WLA GFS + FVLSF+
Subjt:  FPRTARLFEKIGALFAGIGVCIIASFLLVHQNFAWICWLACGFSFIVFVLSFK

KAG6579132.1 hypothetical protein SDJN03_23580, partial [Cucurbita argyrosperma subsp. sororia]9.9e-3261.83Show/hide
Query:  FCTPSDCLPICIRMQQSPQATASSPQNLAKTILGLTFQAILALFISSPTSSPPLLTHLFGAAVLISFAVSFAALFLHNSFPRTARLFEKIGALFAGIGVC
        F TP DCLPI  R ++          N+ K I+GLT QA+LA+FISSP+SSPPLL  LFGA + ISF +SFA +FL N+FP+ ARLFEK+GALFA IGV 
Subjt:  FCTPSDCLPICIRMQQSPQATASSPQNLAKTILGLTFQAILALFISSPTSSPPLLTHLFGAAVLISFAVSFAALFLHNSFPRTARLFEKIGALFAGIGVC

Query:  IIASFLLVHQNFAWICWLACGFSFIVFVLSF
        IIASFLL+H+N+AWI  LAC FS IVF LS+
Subjt:  IIASFLLVHQNFAWICWLACGFSFIVFVLSF

KGN49803.1 hypothetical protein Csa_004681 [Cucumis sativus]6.9e-4163.41Show/hide
Query:  MASTSHQTSFYMNALSSFIPTINQRSYGISIFCTPSDCLPICIRMQ-QSPQATASSPQNLAKTILGLTFQAILALFISSPTSSPPLLTHLFGAAVLISFA
        M S+S Q S  MN L S I +IN+R+  I       + LPICI MQ  SP  ++ +  N+  TILGLTFQA+LALFI+S TSSPPLLTHLFGAAVLISFA
Subjt:  MASTSHQTSFYMNALSSFIPTINQRSYGISIFCTPSDCLPICIRMQ-QSPQATASSPQNLAKTILGLTFQAILALFISSPTSSPPLLTHLFGAAVLISFA

Query:  VSFAALFLHNSFPRTARLFEKIGALFAGIGVCIIASFLLVHQNFAWICWLACGFSFIVFVLSFK
        VSF  +FL + FPR A LFEKIGAL A IGVCI+AS LL+HQNFAWI WLACGFS + F+LSF+
Subjt:  VSFAALFLHNSFPRTARLFEKIGALFAGIGVCIIASFLLVHQNFAWICWLACGFSFIVFVLSFK

KGN49808.1 hypothetical protein Csa_004650 [Cucumis sativus]1.5e-5976.83Show/hide
Query:  MASTSHQTSFYMNALSSFIPTINQRSYGISIFCTPSDCLPICIRMQQSPQATASSPQNLAKTILGLTFQAILALFISS-PTSSPPLLTHLFGAAVLISFA
        MASTSHQTS  M+A SSFI TI+QR+YG+   CTPS+CLP+ IRMQQSPQATA S Q L K IL L+FQA+LALFISS PTS PPLL H F AAV ISFA
Subjt:  MASTSHQTSFYMNALSSFIPTINQRSYGISIFCTPSDCLPICIRMQQSPQATASSPQNLAKTILGLTFQAILALFISS-PTSSPPLLTHLFGAAVLISFA

Query:  VSFAALFLHNSFPRTARLFEKIGALFAGIGVCIIASFLLVHQNFAWICWLACGFSFIVFVLSFK
        VSFAALFLHNSFPRTA LFEK+GALF+  GVC IASFLLVHQNFAWICW+AC FS IVF LSFK
Subjt:  VSFAALFLHNSFPRTARLFEKIGALFAGIGVCIIASFLLVHQNFAWICWLACGFSFIVFVLSFK

XP_022146444.1 uncharacterized protein LOC111015658 [Momordica charantia]6.4e-3168.25Show/hide
Query:  MASTSHQTSFYMNALSSFIPTINQRSYGISIF------CTPSDCLPICIRMQQSPQATASSPQNLAKTILGLTFQAILALFISSPTSSPPLLTHLFGAAV
        MAST  QTS  MNALSSFI  IN+R+ GIS F       TPSDCLPICIRMQ+ P A +S  Q+L KTILGLTFQA+LALFIS P+S P L T LFGAAV
Subjt:  MASTSHQTSFYMNALSSFIPTINQRSYGISIF------CTPSDCLPICIRMQQSPQATASSPQNLAKTILGLTFQAILALFISSPTSSPPLLTHLFGAAV

Query:  LISFAVSFAALFLHNSFPRTARLFEK
        LISFAVSFA LFL  ++PR A LFEK
Subjt:  LISFAVSFAALFLHNSFPRTARLFEK

TrEMBL top hitse value%identityAlignment
A0A0A0KJN8 Uncharacterized protein3.3e-4163.41Show/hide
Query:  MASTSHQTSFYMNALSSFIPTINQRSYGISIFCTPSDCLPICIRMQ-QSPQATASSPQNLAKTILGLTFQAILALFISSPTSSPPLLTHLFGAAVLISFA
        M S+S Q S  MN L S I +IN+R+  I       + LPICI MQ  SP  ++ +  N+  TILGLTFQA+LALFI+S TSSPPLLTHLFGAAVLISFA
Subjt:  MASTSHQTSFYMNALSSFIPTINQRSYGISIFCTPSDCLPICIRMQ-QSPQATASSPQNLAKTILGLTFQAILALFISSPTSSPPLLTHLFGAAVLISFA

Query:  VSFAALFLHNSFPRTARLFEKIGALFAGIGVCIIASFLLVHQNFAWICWLACGFSFIVFVLSFK
        VSF  +FL + FPR A LFEKIGAL A IGVCI+AS LL+HQNFAWI WLACGFS + F+LSF+
Subjt:  VSFAALFLHNSFPRTARLFEKIGALFAGIGVCIIASFLLVHQNFAWICWLACGFSFIVFVLSFK

A0A0A0KJP2 Uncharacterized protein7.1e-6076.83Show/hide
Query:  MASTSHQTSFYMNALSSFIPTINQRSYGISIFCTPSDCLPICIRMQQSPQATASSPQNLAKTILGLTFQAILALFISS-PTSSPPLLTHLFGAAVLISFA
        MASTSHQTS  M+A SSFI TI+QR+YG+   CTPS+CLP+ IRMQQSPQATA S Q L K IL L+FQA+LALFISS PTS PPLL H F AAV ISFA
Subjt:  MASTSHQTSFYMNALSSFIPTINQRSYGISIFCTPSDCLPICIRMQQSPQATASSPQNLAKTILGLTFQAILALFISS-PTSSPPLLTHLFGAAVLISFA

Query:  VSFAALFLHNSFPRTARLFEKIGALFAGIGVCIIASFLLVHQNFAWICWLACGFSFIVFVLSFK
        VSFAALFLHNSFPRTA LFEK+GALF+  GVC IASFLLVHQNFAWICW+AC FS IVF LSFK
Subjt:  VSFAALFLHNSFPRTARLFEKIGALFAGIGVCIIASFLLVHQNFAWICWLACGFSFIVFVLSFK

A0A0A0KQ03 Uncharacterized protein2.0e-2549.11Show/hide
Query:  MAST-SHQTSFYMNALSSFIPTINQRSYGISIFCT----PSDCLPICIRMQQSPQATASSPQNLAKTILGLTFQAILALFIS-SPTSSPPLLTHLFGAAV
        MA T  H+ S  MN L+S I  +  R+ GIS  CT     SDCLPI I+MQ+   +  +SPQ    T L LTFQAI+ LF+S +P+SS PL + LF A +
Subjt:  MAST-SHQTSFYMNALSSFIPTINQRSYGISIFCT----PSDCLPICIRMQQSPQATASSPQNLAKTILGLTFQAILALFIS-SPTSSPPLLTHLFGAAV

Query:  LISFAVSFAALFLHNSFPRTARLFEKIGALFAGIGVCIIASFLLVHQNFAWICWLACGFSFIVFVLSFK
        L SF  S+  + L   FP+TA+L +  GALFA IG CII S LL++ NF WICWLA G     F++SFK
Subjt:  LISFAVSFAALFLHNSFPRTARLFEKIGALFAGIGVCIIASFLLVHQNFAWICWLACGFSFIVFVLSFK

A0A5A7U7U1 Putative Ileal sodium/bile acid cotransporter8.7e-4266.67Show/hide
Query:  MNALSSFIPTINQRSYGISIFCTPSDCLPICIRMQQ-SPQATASSPQNLAKTILGLTFQAILALFISSPTSSPPLLTHLFGAAVLISFAVSFAALFLHNS
        MN L SFI  IN+R+  I       + LPICI MQ+ SP  ++ +  N+ KTILGLTFQA+LALFI+SP SSPPLLTHLF AAVLISFAVSFA +FL N 
Subjt:  MNALSSFIPTINQRSYGISIFCTPSDCLPICIRMQQ-SPQATASSPQNLAKTILGLTFQAILALFISSPTSSPPLLTHLFGAAVLISFAVSFAALFLHNS

Query:  FPRTARLFEKIGALFAGIGVCIIASFLLVHQNFAWICWLACGFSFIVFVLSFK
        FPR A LFEKIGAL A IGVCI+AS LL+HQNFAWI WLA GFS + FVLSF+
Subjt:  FPRTARLFEKIGALFAGIGVCIIASFLLVHQNFAWICWLACGFSFIVFVLSFK

A0A6J1CY58 uncharacterized protein LOC1110156583.1e-3168.25Show/hide
Query:  MASTSHQTSFYMNALSSFIPTINQRSYGISIF------CTPSDCLPICIRMQQSPQATASSPQNLAKTILGLTFQAILALFISSPTSSPPLLTHLFGAAV
        MAST  QTS  MNALSSFI  IN+R+ GIS F       TPSDCLPICIRMQ+ P A +S  Q+L KTILGLTFQA+LALFIS P+S P L T LFGAAV
Subjt:  MASTSHQTSFYMNALSSFIPTINQRSYGISIF------CTPSDCLPICIRMQQSPQATASSPQNLAKTILGLTFQAILALFISSPTSSPPLLTHLFGAAV

Query:  LISFAVSFAALFLHNSFPRTARLFEK
        LISFAVSFA LFL  ++PR A LFEK
Subjt:  LISFAVSFAALFLHNSFPRTARLFEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCAACTTCACACCAAACCTCATTTTATATGAATGCACTTTCTTCCTTTATCCCAACAATCAACCAAAGAAGCTATGGAATTAGCATTTTCTGCACACCATCAGA
TTGTTTACCAATTTGCATTAGAATGCAACAGAGCCCTCAAGCAACAGCCAGTAGCCCTCAAAATCTTGCCAAGACAATTCTTGGGCTTACTTTTCAAGCAATTTTGGCCT
TGTTCATCAGCTCACCAACTTCTTCTCCTCCACTTTTGACTCATCTTTTTGGTGCTGCTGTTTTGATTAGCTTTGCAGTTTCATTTGCTGCTCTTTTCCTTCATAACTCC
TTCCCGAGAACCGCACGTTTGTTCGAAAAGATCGGTGCACTTTTCGCCGGAATCGGTGTTTGTATCATAGCAAGTTTTCTTCTAGTCCATCAGAACTTTGCTTGGATATG
TTGGTTGGCATGTGGCTTCTCCTTCATTGTCTTTGTTCTATCATTTAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCAACTTCACACCAAACCTCATTTTATATGAATGCACTTTCTTCCTTTATCCCAACAATCAACCAAAGAAGCTATGGAATTAGCATTTTCTGCACACCATCAGA
TTGTTTACCAATTTGCATTAGAATGCAACAGAGCCCTCAAGCAACAGCCAGTAGCCCTCAAAATCTTGCCAAGACAATTCTTGGGCTTACTTTTCAAGCAATTTTGGCCT
TGTTCATCAGCTCACCAACTTCTTCTCCTCCACTTTTGACTCATCTTTTTGGTGCTGCTGTTTTGATTAGCTTTGCAGTTTCATTTGCTGCTCTTTTCCTTCATAACTCC
TTCCCGAGAACCGCACGTTTGTTCGAAAAGATCGGTGCACTTTTCGCCGGAATCGGTGTTTGTATCATAGCAAGTTTTCTTCTAGTCCATCAGAACTTTGCTTGGATATG
TTGGTTGGCATGTGGCTTCTCCTTCATTGTCTTTGTTCTATCATTTAAGTGA
Protein sequenceShow/hide protein sequence
MASTSHQTSFYMNALSSFIPTINQRSYGISIFCTPSDCLPICIRMQQSPQATASSPQNLAKTILGLTFQAILALFISSPTSSPPLLTHLFGAAVLISFAVSFAALFLHNS
FPRTARLFEKIGALFAGIGVCIIASFLLVHQNFAWICWLACGFSFIVFVLSFK