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HG10009664 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10009664
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionF-box/kelch-repeat protein At4g19930-like
Genome locationChr06:8640193..8640537
RNA-Seq ExpressionHG10009664
SyntenyHG10009664
Gene Ontology termsNA
InterPro domainsIPR013187 - F-box associated domain, type 3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146376.1 F-box/kelch-repeat protein At4g19930-like [Momordica charantia]1.7e-1751.67Show/hide
Query:  MEMWVLEDYQNQKWV--KEQSFQYDMSDSDID---CRLH-PLGTVTNEGGEQILLFKPTGKNMDRQQLGRQLLYYDMKRRRFHGAEIAGLSQWLSSND--
        +EMWVL+DYQN  WV  KE +FQYDMS  D D    RL  PLG+                        G +LLYYD+KRRRF G EI GLS+WLS+ND  
Subjt:  MEMWVLEDYQNQKWV--KEQSFQYDMSDSDID---CRLH-PLGTVTNEGGEQILLFKPTGKNMDRQQLGRQLLYYDMKRRRFHGAEIAGLSQWLSSND--

Query:  VTDFSFDVYEENIMSLSSIL
        VTD SFD YEENI++LSS++
Subjt:  VTDFSFDVYEENIMSLSSIL
TrEMBL top hitse value%identityAlignment
A0A2P2K4Y2 F-box protein At5g62510-like2.7e-0539.32Show/hide
Query:  MEMWVLEDYQNQKWVKE-QSFQYDMSDSDIDCRLHPLGTVTNEGGEQILLFKPTGKNMDRQQLGRQLLYYDMKRRRFHGAEIAGLSQWL--SSNDVTDFS
        ME+WVL+DYQ   WVK+   F +D ++S    R  P GT+ N  GE +LL   +  +M        +L+YDMKRR F   E++GL +     S  +T   
Subjt:  MEMWVLEDYQNQKWVKE-QSFQYDMSDSDIDCRLHPLGTVTNEGGEQILLFKPTGKNMDRQQLGRQLLYYDMKRRRFHGAEIAGLSQWL--SSNDVTDFS

Query:  FDVYEENIMSLSS-ILG
           YEE+IM+L   ILG
Subjt:  FDVYEENIMSLSS-ILG
A0A6J1CZ64 F-box/kelch-repeat protein At4g19930-like8.0e-1851.67Show/hide
Query:  MEMWVLEDYQNQKWV--KEQSFQYDMSDSDID---CRLH-PLGTVTNEGGEQILLFKPTGKNMDRQQLGRQLLYYDMKRRRFHGAEIAGLSQWLSSND--
        +EMWVL+DYQN  WV  KE +FQYDMS  D D    RL  PLG+                        G +LLYYD+KRRRF G EI GLS+WLS+ND  
Subjt:  MEMWVLEDYQNQKWV--KEQSFQYDMSDSDID---CRLH-PLGTVTNEGGEQILLFKPTGKNMDRQQLGRQLLYYDMKRRRFHGAEIAGLSQWLSSND--

Query:  VTDFSFDVYEENIMSLSSIL
        VTD SFD YEENI++LSS++
Subjt:  VTDFSFDVYEENIMSLSSIL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATGTGGGTATTAGAGGATTACCAGAATCAAAAGTGGGTTAAGGAACAAAGTTTCCAATACGACATGTCGGATTCAGATATCGACTGTCGTCTTCATCCCTTGGG
GACGGTGACAAATGAGGGTGGTGAACAGATTTTACTGTTCAAACCCACTGGCAAAAATATGGATCGCCAACAACTTGGACGGCAGCTGCTTTACTACGACATGAAACGAC
GGCGTTTTCATGGAGCTGAGATTGCTGGTCTGTCTCAATGGTTGTCGTCTAATGATGTTACAGATTTTAGTTTTGATGTTTACGAAGAGAATATTATGAGTTTGTCCTCT
ATTTTGGGTGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGATGTGGGTATTAGAGGATTACCAGAATCAAAAGTGGGTTAAGGAACAAAGTTTCCAATACGACATGTCGGATTCAGATATCGACTGTCGTCTTCATCCCTTGGG
GACGGTGACAAATGAGGGTGGTGAACAGATTTTACTGTTCAAACCCACTGGCAAAAATATGGATCGCCAACAACTTGGACGGCAGCTGCTTTACTACGACATGAAACGAC
GGCGTTTTCATGGAGCTGAGATTGCTGGTCTGTCTCAATGGTTGTCGTCTAATGATGTTACAGATTTTAGTTTTGATGTTTACGAAGAGAATATTATGAGTTTGTCCTCT
ATTTTGGGTGCTTAG
Protein sequenceShow/hide protein sequence
MEMWVLEDYQNQKWVKEQSFQYDMSDSDIDCRLHPLGTVTNEGGEQILLFKPTGKNMDRQQLGRQLLYYDMKRRRFHGAEIAGLSQWLSSNDVTDFSFDVYEENIMSLSS
ILGA