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HG10009679 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10009679
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionV-set and immunoglobulin domain-containing protein
Genome locationChr06:8825753..8827916
RNA-Seq ExpressionHG10009679
SyntenyHG10009679
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601944.1 hypothetical protein SDJN03_07177, partial [Cucurbita argyrosperma subsp. sororia]7.9e-5186.57Show/hide
Query:  MARLLISTRPFPFSPPPVVPPRAFFRPSTFSPAVRFSGETSASRTLRVVTTRAGPSTSSYIFAFSIPLSLILITALTALKIGDNLDKKFLEELALNQAIM
        MARLLISTR FPF P P+VP RA FRPS  SPAVRFSG+ SA+R LRVVTTRAG STSSYIFAFSIP SLIL+TALTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARLLISTRPFPFSPPPVVPPRAFFRPSTFSPAVRFSGETSASRTLRVVTTRAGPSTSSYIFAFSIPLSLILITALTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEENKDDGSEVSFEEKPALPRTRNRPKREAEV
        EEDEENKD  SE+SFEEKPALPRTRNRPKREAEV
Subjt:  EEDEENKDDGSEVSFEEKPALPRTRNRPKREAEV

KAG7032638.1 hypothetical protein SDJN02_06688 [Cucurbita argyrosperma subsp. argyrosperma]6.1e-5186.57Show/hide
Query:  MARLLISTRPFPFSPPPVVPPRAFFRPSTFSPAVRFSGETSASRTLRVVTTRAGPSTSSYIFAFSIPLSLILITALTALKIGDNLDKKFLEELALNQAIM
        MARLLISTR FPF P P+VP RAFFRPS  SPAVRFSG+ SA+R LRVVTTRAG STSSYIFAFSIP SLIL+TALTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARLLISTRPFPFSPPPVVPPRAFFRPSTFSPAVRFSGETSASRTLRVVTTRAGPSTSSYIFAFSIPLSLILITALTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEENKDDGSEVSFEEKPALPRTRNRPKREAEV
        EEDEENKD  SE+SFE KPALPRTRNRPKREAEV
Subjt:  EEDEENKDDGSEVSFEEKPALPRTRNRPKREAEV

XP_022961614.1 uncharacterized protein LOC111462310 [Cucurbita moschata]1.4e-5086.47Show/hide
Query:  MARLLISTRPFPFSPPPVVPPRAFFRPSTFSPAVRFSGETSASRTLRVVTTRAGPSTSSYIFAFSIPLSLILITALTALKIGDNLDKKFLEELALNQAIM
        MARLLISTR FPF P P+VP RAFFRPS  SPAVRFSG+ SA+R LRVVTTRAG STSSYIFAFSIP SLIL+TALTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARLLISTRPFPFSPPPVVPPRAFFRPSTFSPAVRFSGETSASRTLRVVTTRAGPSTSSYIFAFSIPLSLILITALTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEENKDDGSEVSFEEKPALPRTRNRPKREAE
        EEDEENKD  SE+ FEEKPALPRTRNRPKREAE
Subjt:  EEDEENKDDGSEVSFEEKPALPRTRNRPKREAE

XP_023525740.1 uncharacterized protein LOC111789252 [Cucurbita pepo subsp. pepo]9.4e-5287.31Show/hide
Query:  MARLLISTRPFPFSPPPVVPPRAFFRPSTFSPAVRFSGETSASRTLRVVTTRAGPSTSSYIFAFSIPLSLILITALTALKIGDNLDKKFLEELALNQAIM
        MARLLISTR FPF P P+VP RAFFRPS  SPAVRFSG+ SA+R LRVVTTRAG STSSYIFAFSIP SLIL+TALTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARLLISTRPFPFSPPPVVPPRAFFRPSTFSPAVRFSGETSASRTLRVVTTRAGPSTSSYIFAFSIPLSLILITALTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEENKDDGSEVSFEEKPALPRTRNRPKREAEV
        EEDEENKD  SE+SFEEKPALPRTRNRPKREAEV
Subjt:  EEDEENKDDGSEVSFEEKPALPRTRNRPKREAEV

XP_038875344.1 uncharacterized protein LOC120067823 [Benincasa hispida]6.5e-5384.72Show/hide
Query:  TLPLP-----MARLLISTRPFPFSPPPVVPPRAFFRPSTFSPAVRFSGETSASRTLRVVTTRAGPSTSSYIFAFSIPLSLILITALTALKIGDNLDKKFL
        ++P+P     MA+LLISTRPFPFS   V PPRAFFRPS FSPAV FSG  S SR LRVVTTRAG STSSYIFAFSIPLSLILIT LTALKIGDNLDKKFL
Subjt:  TLPLP-----MARLLISTRPFPFSPPPVVPPRAFFRPSTFSPAVRFSGETSASRTLRVVTTRAGPSTSSYIFAFSIPLSLILITALTALKIGDNLDKKFL

Query:  EELALNQAIMEEDEENKDDGSEVSFEEKPALPRTRNRPKREAEV
        EELALNQAIMEEDEENKDDGSE+SFEEKPALPRTRNRPKREAEV
Subjt:  EELALNQAIMEEDEENKDDGSEVSFEEKPALPRTRNRPKREAEV

TrEMBL top hitse value%identityAlignment
A0A1S3CQ37 uncharacterized protein LOC1035034029.5e-5084.33Show/hide
Query:  MARLLISTRPFPFSPPPVVPPRAFFRPSTFSPAVRFSGETSASRTLRVVTTRAGPSTSSYIFAFSIPLSLILITALTALKIGDNLDKKFLEELALNQAIM
        MAR LISTRPFPFS  P+ PPRAFFRP TFSP VRFS   S SRTLRVV TRAG STSSYIFAFSIPLSLILIT LTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARLLISTRPFPFSPPPVVPPRAFFRPSTFSPAVRFSGETSASRTLRVVTTRAGPSTSSYIFAFSIPLSLILITALTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEENKDDGSEVSFEEKPALPRTRNRPKREAEV
        EEDE+ + DG+E+SFEEKP LPRTRNRPKREAEV
Subjt:  EEDEENKDDGSEVSFEEKPALPRTRNRPKREAEV

A0A6J1FJ66 uncharacterized protein LOC1114447536.1e-4984.44Show/hide
Query:  MARLLISTRP-FPFSPPPVVPPRAFFRPSTFSPAVRFSGETSASRTLRVVTTRAGPSTSSYIFAFSIPLSLILITALTALKIGDNLDKKFLEELALNQAI
        MARLLISTR  FP S  PV P RAFFRPS  SPAVRF G+ SA +TLR+VTTRAG STSSYIFAFSIP SL+L+TALTALKIGDNLDKKFLEELALNQAI
Subjt:  MARLLISTRP-FPFSPPPVVPPRAFFRPSTFSPAVRFSGETSASRTLRVVTTRAGPSTSSYIFAFSIPLSLILITALTALKIGDNLDKKFLEELALNQAI

Query:  MEEDEENKDDGSEVSFEEKPALPRTRNRPKREAEV
        MEEDEENKDDGS +SFEEKPALPRTRNRPKREAEV
Subjt:  MEEDEENKDDGSEVSFEEKPALPRTRNRPKREAEV

A0A6J1HEK5 uncharacterized protein LOC1114623106.6e-5186.47Show/hide
Query:  MARLLISTRPFPFSPPPVVPPRAFFRPSTFSPAVRFSGETSASRTLRVVTTRAGPSTSSYIFAFSIPLSLILITALTALKIGDNLDKKFLEELALNQAIM
        MARLLISTR FPF P P+VP RAFFRPS  SPAVRFSG+ SA+R LRVVTTRAG STSSYIFAFSIP SLIL+TALTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARLLISTRPFPFSPPPVVPPRAFFRPSTFSPAVRFSGETSASRTLRVVTTRAGPSTSSYIFAFSIPLSLILITALTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEENKDDGSEVSFEEKPALPRTRNRPKREAE
        EEDEENKD  SE+ FEEKPALPRTRNRPKREAE
Subjt:  EEDEENKDDGSEVSFEEKPALPRTRNRPKREAE

A0A6J1JTZ0 uncharacterized protein LOC1114874915.5e-5087.12Show/hide
Query:  MARLLISTRPFPFSPPPVVPPRAFFRPSTFSPAVRFSGETSASRTLRVVTTRAGPSTSSYIFAFSIPLSLILITALTALKIGDNLDKKFLEELALNQAIM
        MARLLISTR FPF   P+VP RAFFRPS  SPAVRFSG+ SA+RTLRVVTTRAG STSSYIFAFSIP SLIL+TALTALKIGDNLDKKFLEELALNQAIM
Subjt:  MARLLISTRPFPFSPPPVVPPRAFFRPSTFSPAVRFSGETSASRTLRVVTTRAGPSTSSYIFAFSIPLSLILITALTALKIGDNLDKKFLEELALNQAIM

Query:  EEDEENKDDGSEVSFEEKPALPRTRNRPKREA
        EEDEENKD  SE+SFEEKPALPRTRNRPKREA
Subjt:  EEDEENKDDGSEVSFEEKPALPRTRNRPKREA

A0A6J1K146 uncharacterized protein LOC1114896903.0e-4884.44Show/hide
Query:  MARLLISTRP-FPFSPPPVVPPRAFFRPSTFSPAVRFSGETSASRTLRVVTTRAGPSTSSYIFAFSIPLSLILITALTALKIGDNLDKKFLEELALNQAI
        MARLLISTR  FP S  PVVP RA FRPS  SPAVRF G++SA +TLR+VTTRAG STSSYIFAFSI  SLIL+TALTALKIGDNLDKKFLEELALNQAI
Subjt:  MARLLISTRP-FPFSPPPVVPPRAFFRPSTFSPAVRFSGETSASRTLRVVTTRAGPSTSSYIFAFSIPLSLILITALTALKIGDNLDKKFLEELALNQAI

Query:  MEEDEENKDDGSEVSFEEKPALPRTRNRPKREAEV
        MEEDEENKDDGS +SFEEKPALPRTRNRPKREAEV
Subjt:  MEEDEENKDDGSEVSFEEKPALPRTRNRPKREAEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G31560.1 high chlorophyll fluorescence 1534.7e-1745.32Show/hide
Query:  MARLLISTRPFPFSPPPVVPPRAFFRPSTFSPAVRF----SGETSASRTLR--VVTTRAGPSTSSYIFAFSIPLSLILITALTALKIGDNLDKKFLEELA
        MARL +S    P  P  +  P +  +P    PA  F    +G    +R +R   V TRAGPSTSSY+ AF+IP +LI  T  T++KI D LD+ FLE++A
Subjt:  MARLLISTRPFPFSPPPVVPPRAFFRPSTFSPAVRF----SGETSASRTLR--VVTTRAGPSTSSYIFAFSIPLSLILITALTALKIGDNLDKKFLEELA

Query:  LNQAI--MEEDEENKDDGSEVSFEEKPALPRTRNRPKRE
        LNQAI   E+ E  + D S     ++P L RTRNRPKRE
Subjt:  LNQAI--MEEDEENKDDGSEVSFEEKPALPRTRNRPKRE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCAATTGCTTGGAGAGGTCCATTGGATTGGAGTTGGGCCGTCCATTGTCTTCACACCCATTTACATGATAACAACTTCCAGCCTTCAACAATGTCCATTCCAGTT
CCATACACTTCCACTACCTATGGCCAGGCTCCTTATCTCAACCCGGCCCTTTCCCTTTTCCCCTCCCCCCGTCGTTCCGCCACGGGCATTCTTCAGGCCCTCCACTTTTT
CGCCGGCGGTCAGATTCTCCGGCGAAACATCGGCGTCCAGAACCCTACGAGTGGTGACGACTCGTGCCGGCCCCAGCACCAGCAGTTACATCTTTGCCTTCTCCATCCCT
TTATCTCTTATTCTCATCACTGCCCTCACCGCTCTTAAAATCGGCGATAACCTCGACAAGAAGTTTCTTGAGGAGCTTGCTCTTAATCAAGCCATCATGGAGGAAGATGA
GGAGAACAAAGATGATGGTTCAGAAGTATCTTTTGAAGAAAAGCCAGCTCTTCCACGAACTCGCAACCGCCCTAAAAGGGAAGCTGAGGTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGCAATTGCTTGGAGAGGTCCATTGGATTGGAGTTGGGCCGTCCATTGTCTTCACACCCATTTACATGATAACAACTTCCAGCCTTCAACAATGTCCATTCCAGTT
CCATACACTTCCACTACCTATGGCCAGGCTCCTTATCTCAACCCGGCCCTTTCCCTTTTCCCCTCCCCCCGTCGTTCCGCCACGGGCATTCTTCAGGCCCTCCACTTTTT
CGCCGGCGGTCAGATTCTCCGGCGAAACATCGGCGTCCAGAACCCTACGAGTGGTGACGACTCGTGCCGGCCCCAGCACCAGCAGTTACATCTTTGCCTTCTCCATCCCT
TTATCTCTTATTCTCATCACTGCCCTCACCGCTCTTAAAATCGGCGATAACCTCGACAAGAAGTTTCTTGAGGAGCTTGCTCTTAATCAAGCCATCATGGAGGAAGATGA
GGAGAACAAAGATGATGGTTCAGAAGTATCTTTTGAAGAAAAGCCAGCTCTTCCACGAACTCGCAACCGCCCTAAAAGGGAAGCTGAGGTATAA
Protein sequenceShow/hide protein sequence
MGQLLGEVHWIGVGPSIVFTPIYMITTSSLQQCPFQFHTLPLPMARLLISTRPFPFSPPPVVPPRAFFRPSTFSPAVRFSGETSASRTLRVVTTRAGPSTSSYIFAFSIP
LSLILITALTALKIGDNLDKKFLEELALNQAIMEEDEENKDDGSEVSFEEKPALPRTRNRPKREAEV