; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10009705 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10009705
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCoiled-coil domain-containing protein 86
Genome locationChr06:9075662..9076234
RNA-Seq ExpressionHG10009705
SyntenyHG10009705
Gene Ontology termsGO:0005730 - nucleolus (cellular component)
InterPro domainsIPR005579 - Cgr1-like
IPR026570 - Coiled-coil domain-containing protein 86


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004143761.1 protein PXR1 [Cucumis sativus]1.8e-8595.29Show/hide
Query:  MACTIDFRRLDEGFGGKTYKRKREEAEKSLNITESENADASMEIDDSL-PPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQV
        MACTIDFRRLDEGFGGKTYKRKREEAEKSL ITESENAD  MEIDDSL PPP+KRSAIPSSENPDKPT+GNPTYDGVI GKVSGRKWKQ RKHRTSAMQV
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAEKSLNITESENADASMEIDDSL-PPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQV

Query:  SRKGTTFEERERQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
        SRKGTTFEERERQKMIKAAF+ERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
Subjt:  SRKGTTFEERERQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
XP_008465532.1 PREDICTED: protein PXR1 [Cucumis melo]5.6e-8796.34Show/hide
Query:  MACTIDFRRLDEGFGGKTYKRKREEAEKSLNITESENADASMEIDDSL-PPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQV
        MACTIDFRRLDEGFGGKTYKRKREEAEKSL ITESENAD +MEIDDSL PPP+KRSAIPSSENPDKPT+GNPTYDGVIAGKVSGRKWKQPRKHRTSAMQV
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAEKSLNITESENADASMEIDDSL-PPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQV

Query:  SRKGTTFEERERQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
        SRKGTTFEERERQKMIKAAF+ERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
Subjt:  SRKGTTFEERERQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
XP_022141739.1 protein PXR1 [Momordica charantia]5.8e-8492.71Show/hide
Query:  MACTIDFRRLDEGFGGKTYKRK--REEAEKSLNITESENADASMEIDDSLPPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQ
        MACTIDFR LDEGFGGKTYKRK  REEA+ SLNI +SENADASMEID+S PPP+KRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHR SAMQ
Subjt:  MACTIDFRRLDEGFGGKTYKRK--REEAEKSLNITESENADASMEIDDSLPPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQ

Query:  VSRKGTTFEERERQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
        VSRKGTTFEERE+QKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVP+D+IKK
Subjt:  VSRKGTTFEERERQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
XP_022939634.1 protein PXR1 [Cucurbita moschata]1.7e-8393.68Show/hide
Query:  MACTIDFRRLDEGFGGKTYKRKREEAEKSLNITESENADASMEIDDSLPPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQVS
        MACTIDFRRLDEGFGGKTYKRKREEAE SLNI  SENADASM++D+SL PP KRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRTSAM VS
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAEKSLNITESENADASMEIDDSLPPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQVS

Query:  RKGTTFEERERQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
        RKGTTFEERERQKMIKAA+RERKEELKEQIR NKVEKRKK+EEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
Subjt:  RKGTTFEERERQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
XP_038874831.1 protein PXR1 [Benincasa hispida]3.5e-8998.42Show/hide
Query:  MACTIDFRRLDEGFGGKTYKRKREEAEKSLNITESENADASMEIDDSLPPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQVS
        MACTIDFRRLDEGFGGKTYKRKREEAEKSLNITESENAD SMEIDDSLPPPSKRSAIPSSENPDKPTF NPTYDGVIAGKVSGRKWKQPRKHRTSAMQVS
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAEKSLNITESENADASMEIDDSLPPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQVS

Query:  RKGTTFEERERQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
        RKGTTFEERERQK IKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
Subjt:  RKGTTFEERERQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
TrEMBL top hitse value%identityAlignment
A0A0A0KNG5 Coiled-coil domain-containing protein 868.8e-8695.29Show/hide
Query:  MACTIDFRRLDEGFGGKTYKRKREEAEKSLNITESENADASMEIDDSL-PPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQV
        MACTIDFRRLDEGFGGKTYKRKREEAEKSL ITESENAD  MEIDDSL PPP+KRSAIPSSENPDKPT+GNPTYDGVI GKVSGRKWKQ RKHRTSAMQV
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAEKSLNITESENADASMEIDDSL-PPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQV

Query:  SRKGTTFEERERQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
        SRKGTTFEERERQKMIKAAF+ERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
Subjt:  SRKGTTFEERERQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
A0A1S3CP36 Coiled-coil domain-containing protein 862.7e-8796.34Show/hide
Query:  MACTIDFRRLDEGFGGKTYKRKREEAEKSLNITESENADASMEIDDSL-PPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQV
        MACTIDFRRLDEGFGGKTYKRKREEAEKSL ITESENAD +MEIDDSL PPP+KRSAIPSSENPDKPT+GNPTYDGVIAGKVSGRKWKQPRKHRTSAMQV
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAEKSLNITESENADASMEIDDSL-PPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQV

Query:  SRKGTTFEERERQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
        SRKGTTFEERERQKMIKAAF+ERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
Subjt:  SRKGTTFEERERQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
A0A5D3BKZ5 Coiled-coil domain-containing protein 862.7e-8796.34Show/hide
Query:  MACTIDFRRLDEGFGGKTYKRKREEAEKSLNITESENADASMEIDDSL-PPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQV
        MACTIDFRRLDEGFGGKTYKRKREEAEKSL ITESENAD +MEIDDSL PPP+KRSAIPSSENPDKPT+GNPTYDGVIAGKVSGRKWKQPRKHRTSAMQV
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAEKSLNITESENADASMEIDDSL-PPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQV

Query:  SRKGTTFEERERQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
        SRKGTTFEERERQKMIKAAF+ERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
Subjt:  SRKGTTFEERERQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
A0A6J1CIY7 Coiled-coil domain-containing protein 862.8e-8492.71Show/hide
Query:  MACTIDFRRLDEGFGGKTYKRK--REEAEKSLNITESENADASMEIDDSLPPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQ
        MACTIDFR LDEGFGGKTYKRK  REEA+ SLNI +SENADASMEID+S PPP+KRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHR SAMQ
Subjt:  MACTIDFRRLDEGFGGKTYKRK--REEAEKSLNITESENADASMEIDDSLPPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQ

Query:  VSRKGTTFEERERQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
        VSRKGTTFEERE+QKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVP+D+IKK
Subjt:  VSRKGTTFEERERQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
A0A6J1JYC3 Coiled-coil domain-containing protein 868.2e-8493.68Show/hide
Query:  MACTIDFRRLDEGFGGKTYKRKREEAEKSLNITESENADASMEIDDSLPPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQVS
        MACTIDFRRLDEGFGGKTYKRKREEAE SLNI  SENADASM++D+SL PP KRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRTSAM VS
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAEKSLNITESENADASMEIDDSLPPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQVS

Query:  RKGTTFEERERQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
        RKGTTFEERERQKMIKAA+RERKEELKEQIR NKVEKRKK+EEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
Subjt:  RKGTTFEERERQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G31410.1 unknown protein3.7e-5264.06Show/hide
Query:  MACTIDFRRLDEGFGGKTYKRKREEAEKSLNITESENADASMEIDDSLPPPSKRSAIPSSENPDKP---TFGNPTYDGVIAGKVSGRKWKQPRKHRTSAM
        MACT+DFR LDEGFGGKTYKRKRE  E++    E+   +ASM+ID + PP +KRSA+ SSENPDKP       PTYDGVIAGKVSGR WKQPR HR+S  
Subjt:  MACTIDFRRLDEGFGGKTYKRKREEAEKSLNITESENADASMEIDDSLPPPSKRSAIPSSENPDKP---TFGNPTYDGVIAGKVSGRKWKQPRKHRTSAM

Query:  QVSRKGTTFEERERQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKS-KQKKLLKVVPEDYI
         V  +    EE +RQ+ IK A++ER  ELKE+IR NKVEKRKK+EEREK+KKEN+LR+GTKLQKITNPKTLKKI+ S KQ+K LK +P++ +
Subjt:  QVSRKGTTFEERERQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKS-KQKKLLKVVPEDYI

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTGCACCATCGACTTTCGCCGCCTGGACGAGGGTTTTGGTGGAAAGACCTACAAGCGGAAGCGTGAAGAGGCTGAGAAAAGCCTCAACATCACTGAATCTGAAAA
TGCCGACGCCTCCATGGAAATCGACGACTCACTTCCTCCGCCTTCCAAACGATCCGCAATTCCTTCGTCGGAAAATCCTGACAAACCGACCTTCGGAAACCCTACATACG
ACGGCGTGATCGCCGGAAAAGTTTCCGGACGGAAGTGGAAACAGCCTCGGAAGCACAGGACGTCCGCTATGCAGGTGAGCCGAAAAGGCACCACGTTTGAGGAGAGGGAG
AGGCAGAAGATGATCAAGGCGGCGTTTAGGGAACGGAAGGAGGAATTGAAGGAGCAGATTAGGTTAAACAAGGTAGAGAAGAGGAAGAAGAGGGAGGAGAGAGAGAAGAA
GAAGAAGGAGAACATTTTGAGATCTGGAACTAAGCTACAGAAGATTACAAATCCCAAGACGCTGAAGAAGATTGCCAAGTCTAAGCAAAAGAAGCTCCTCAAGGTTGTTC
CTGAGGATTACATAAAAAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGTGCACCATCGACTTTCGCCGCCTGGACGAGGGTTTTGGTGGAAAGACCTACAAGCGGAAGCGTGAAGAGGCTGAGAAAAGCCTCAACATCACTGAATCTGAAAA
TGCCGACGCCTCCATGGAAATCGACGACTCACTTCCTCCGCCTTCCAAACGATCCGCAATTCCTTCGTCGGAAAATCCTGACAAACCGACCTTCGGAAACCCTACATACG
ACGGCGTGATCGCCGGAAAAGTTTCCGGACGGAAGTGGAAACAGCCTCGGAAGCACAGGACGTCCGCTATGCAGGTGAGCCGAAAAGGCACCACGTTTGAGGAGAGGGAG
AGGCAGAAGATGATCAAGGCGGCGTTTAGGGAACGGAAGGAGGAATTGAAGGAGCAGATTAGGTTAAACAAGGTAGAGAAGAGGAAGAAGAGGGAGGAGAGAGAGAAGAA
GAAGAAGGAGAACATTTTGAGATCTGGAACTAAGCTACAGAAGATTACAAATCCCAAGACGCTGAAGAAGATTGCCAAGTCTAAGCAAAAGAAGCTCCTCAAGGTTGTTC
CTGAGGATTACATAAAAAAATAG
Protein sequenceShow/hide protein sequence
MACTIDFRRLDEGFGGKTYKRKREEAEKSLNITESENADASMEIDDSLPPPSKRSAIPSSENPDKPTFGNPTYDGVIAGKVSGRKWKQPRKHRTSAMQVSRKGTTFEERE
RQKMIKAAFRERKEELKEQIRLNKVEKRKKREEREKKKKENILRSGTKLQKITNPKTLKKIAKSKQKKLLKVVPEDYIKK