; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10009750 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10009750
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionB3 domain-containing transcription factor FUS3
Genome locationChr06:9723403..9727213
RNA-Seq ExpressionHG10009750
SyntenyHG10009750
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0048731 - system development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR015300 - DNA-binding pseudobarrel domain superfamily
IPR044800 - B3 domain-containing transcription factor LEC2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011656199.1 B3 domain-containing transcription factor FUS3 [Cucumis sativus]7.7e-6157.24Show/hide
Query:  LPLPSHHRLLLPA-DDLAAAVPSPAFPSTALHRKKRMPRNRR-------RSSSNLPFFP-PSSSSSNNSTPHLPPSRVIDPRNLKFLFQKELKNSDVSSL
        +P+     LL PA DDL++AV  PAF ST L RKKRMPRNRR        SSSNLP F  PSSSSS  STPHLP  RVIDPR LKFLFQKELKNSDVSSL
Subjt:  LPLPSHHRLLLPA-DDLAAAVPSPAFPSTALHRKKRMPRNRR-------RSSSNLPFFP-PSSSSSNNSTPHLPPSRVIDPRNLKFLFQKELKNSDVSSL

Query:  RRMILPK---------------------------------------------------------------------------VIQAKKACEQEIYSDIAT
        RRMILPK                                                                           VIQAKKA EQE+Y+DI T
Subjt:  RRMILPK---------------------------------------------------------------------------VIQAKKACEQEIYSDIAT

Query:  N--VVINDDIVFQDYDASKAASSIYVPSPTMEDPVSSFIYDTSSAFDNDSPFDFMSGSMTNYSRMGALEGFGSVENLSLDDFY
        N  V+ NDDIVF+D+DASKAASSIYVPSP+ME PVSSFIYDTS AFDNDSPFDFM+GSMTNYSRMGALEGFGSVENLSLDDFY
Subjt:  N--VVINDDIVFQDYDASKAASSIYVPSPTMEDPVSSFIYDTSSAFDNDSPFDFMSGSMTNYSRMGALEGFGSVENLSLDDFY

XP_022962310.1 B3 domain-containing transcription factor FUS3-like isoform X1 [Cucurbita moschata]3.4e-5653.47Show/hide
Query:  MMPILDHHHDHNNQLPLPS-HHRLLLPADDLAAAVPSPAFPSTALHRKKRMPRNRRRSSSNLPF-FPPSSSSSNNSTPHLPPSRVIDPRNLKFLFQKELK
        MM I++  H      PL   +HRL   + DLAAAV  P F    +HRKKRM R +RRSSSNL F FPPSSSS+     HLPP RVIDPR LKFLFQKELK
Subjt:  MMPILDHHHDHNNQLPLPS-HHRLLLPADDLAAAVPSPAFPSTALHRKKRMPRNRRRSSSNLPF-FPPSSSSSNNSTPHLPPSRVIDPRNLKFLFQKELK

Query:  NSDVSSLRRMILPK---------------------------------------------------------------------------VIQAKKACEQE
        NSDVSSLRRMILPK                                                                           VIQAKKA + E
Subjt:  NSDVSSLRRMILPK---------------------------------------------------------------------------VIQAKKACEQE

Query:  IYSDIATNVVINDDIVFQDYDASKAASSIYVPSPTMEDPVSSFIYDTSSAFDNDSPFDFMSGSMTNYSRMGALEGFGSVENLSLDDFY
        IYSDIA + V+N DIVFQD++ASKAA+S+YVPS TM+DPVSSFIYDTSSAFDNDS FDFMS SMTNYSRMG +EGFGSVENLSLDDFY
Subjt:  IYSDIATNVVINDDIVFQDYDASKAASSIYVPSPTMEDPVSSFIYDTSSAFDNDSPFDFMSGSMTNYSRMGALEGFGSVENLSLDDFY

XP_022990186.1 B3 domain-containing transcription factor FUS3-like isoform X1 [Cucurbita maxima]8.8e-5753.31Show/hide
Query:  MMPILDHHHDHNNQLPLPSHHRLLLPADDLAAAVPSPAFPSTALHRKKRMPRNRRRSSSNLPF-FPPSSSSSNNSTPHLPPSRVIDPRNLKFLFQKELKN
        MM I++  H      PL   +RL   + DLAAAV  P F    +HRKKRM R +RRSSSNL F FPPSSSS+     HLPP RVIDPR LKFLFQKELKN
Subjt:  MMPILDHHHDHNNQLPLPSHHRLLLPADDLAAAVPSPAFPSTALHRKKRMPRNRRRSSSNLPF-FPPSSSSSNNSTPHLPPSRVIDPRNLKFLFQKELKN

Query:  SDVSSLRRMILPK---------------------------------------------------------------------------VIQAKKACEQEI
        SDVSSLRRMILPK                                                                           VIQAKKA + EI
Subjt:  SDVSSLRRMILPK---------------------------------------------------------------------------VIQAKKACEQEI

Query:  YSDIATNVVINDDIVFQDYDASKAASSIYVPSPTMEDPVSSFIYDTSSAFDNDSPFDFMSGSMTNYSRMGALEGFGSVENLSLDDFY
        YSDIA + V+N DIVFQD++ASKAA+S+YVPS TM+DPVSSFIYDTSSAFDNDSPFDFMS SMTNYSR+G +EGFGSVENLSLDDFY
Subjt:  YSDIATNVVINDDIVFQDYDASKAASSIYVPSPTMEDPVSSFIYDTSSAFDNDSPFDFMSGSMTNYSRMGALEGFGSVENLSLDDFY

XP_023551272.1 B3 domain-containing transcription factor FUS3-like isoform X2 [Cucurbita pepo subsp. pepo]8.6e-5252.1Show/hide
Query:  MPILDHHHDHNNQLPLPSHHRLLLPADDLAAAVPSPAFPSTALHRKKRMPRNRRRSSSNLPFFPPSSSSSNNSTPHL-PPSRVIDPRNLKFLFQKELKNS
        MP LD+        P P       P  DLAAAVP+ A    +LHRKKRMPR+RRRSSSNL F  PSSS+     P L PP RVIDPR LKFLF+KELKNS
Subjt:  MPILDHHHDHNNQLPLPSHHRLLLPADDLAAAVPSPAFPSTALHRKKRMPRNRRRSSSNLPFFPPSSSSSNNSTPHL-PPSRVIDPRNLKFLFQKELKNS

Query:  DVSSLRRMILPK---------------------------------------------------------------------------VIQAKKACEQEIY
        DVSSLRRMILPK                                                                           VIQAKKA +QE+Y
Subjt:  DVSSLRRMILPK---------------------------------------------------------------------------VIQAKKACEQEIY

Query:  SDIATNVVINDDIVFQDYDASKAASSIYVPSPTMEDPVSSFIYDTSSAFDNDSPFDFMSGSMTNYSRMGALEGFGSVENLSLDDFY
        + I TNVVIN DIVF DYD +K  +SIYVPSPTM+  VSSFIYDTSSAFDNDS FDFMSGS+TNYSRMG LEGFGSVENLSLD+FY
Subjt:  SDIATNVVINDDIVFQDYDASKAASSIYVPSPTMEDPVSSFIYDTSSAFDNDSPFDFMSGSMTNYSRMGALEGFGSVENLSLDDFY

XP_038874973.1 B3 domain-containing transcription factor FUS3-like [Benincasa hispida]1.6e-7463.07Show/hide
Query:  MPILDHHHDHNNQLPLPSHHRLLLP-ADDLAAAVPSPAFPSTALHRKKRMPRNRRRSSSNLPFFPPSSSSSNNSTPHLPPSRVIDPRNLKFLFQKELKNS
        MPILD HHD+N   P   HHRLLLP ADDLAAAV  PAF STALHRKKRMPRNRRRSSSNLPFFPPSSSS+       PP RVIDP  LKFLFQKELKNS
Subjt:  MPILDHHHDHNNQLPLPSHHRLLLP-ADDLAAAVPSPAFPSTALHRKKRMPRNRRRSSSNLPFFPPSSSSSNNSTPHLPPSRVIDPRNLKFLFQKELKNS

Query:  DVSSLRRMILPK---------------------------------------------------------------------------VIQAKKACEQEIY
        DVSSLRRMILPK                                                                           VIQAKKA EQEIY
Subjt:  DVSSLRRMILPK---------------------------------------------------------------------------VIQAKKACEQEIY

Query:  SDIATN-VVINDDIVFQDYDASKAASSIYVPSPTMEDPVSSFIYDTSSAFDNDSPFDFMSGSMTNYSRMGALEGFGSVENLSLDDFY
        SDIATN +VIN+DI+FQDYDASK ASSIYVPSP MEDPVSSFIYDTSSAFDNDSPFDFMSGSMTNYSR+GALEGFGSVENLSLDDFY
Subjt:  SDIATN-VVINDDIVFQDYDASKAASSIYVPSPTMEDPVSSFIYDTSSAFDNDSPFDFMSGSMTNYSRMGALEGFGSVENLSLDDFY

TrEMBL top hitse value%identityAlignment
A0A0A0KR53 TF-B3 domain-containing protein3.7e-6157.24Show/hide
Query:  LPLPSHHRLLLPA-DDLAAAVPSPAFPSTALHRKKRMPRNRR-------RSSSNLPFFP-PSSSSSNNSTPHLPPSRVIDPRNLKFLFQKELKNSDVSSL
        +P+     LL PA DDL++AV  PAF ST L RKKRMPRNRR        SSSNLP F  PSSSSS  STPHLP  RVIDPR LKFLFQKELKNSDVSSL
Subjt:  LPLPSHHRLLLPA-DDLAAAVPSPAFPSTALHRKKRMPRNRR-------RSSSNLPFFP-PSSSSSNNSTPHLPPSRVIDPRNLKFLFQKELKNSDVSSL

Query:  RRMILPK---------------------------------------------------------------------------VIQAKKACEQEIYSDIAT
        RRMILPK                                                                           VIQAKKA EQE+Y+DI T
Subjt:  RRMILPK---------------------------------------------------------------------------VIQAKKACEQEIYSDIAT

Query:  N--VVINDDIVFQDYDASKAASSIYVPSPTMEDPVSSFIYDTSSAFDNDSPFDFMSGSMTNYSRMGALEGFGSVENLSLDDFY
        N  V+ NDDIVF+D+DASKAASSIYVPSP+ME PVSSFIYDTS AFDNDSPFDFM+GSMTNYSRMGALEGFGSVENLSLDDFY
Subjt:  N--VVINDDIVFQDYDASKAASSIYVPSPTMEDPVSSFIYDTSSAFDNDSPFDFMSGSMTNYSRMGALEGFGSVENLSLDDFY

A0A6J1HEP2 B3 domain-containing transcription factor FUS3-like isoform X11.6e-5653.47Show/hide
Query:  MMPILDHHHDHNNQLPLPS-HHRLLLPADDLAAAVPSPAFPSTALHRKKRMPRNRRRSSSNLPF-FPPSSSSSNNSTPHLPPSRVIDPRNLKFLFQKELK
        MM I++  H      PL   +HRL   + DLAAAV  P F    +HRKKRM R +RRSSSNL F FPPSSSS+     HLPP RVIDPR LKFLFQKELK
Subjt:  MMPILDHHHDHNNQLPLPS-HHRLLLPADDLAAAVPSPAFPSTALHRKKRMPRNRRRSSSNLPF-FPPSSSSSNNSTPHLPPSRVIDPRNLKFLFQKELK

Query:  NSDVSSLRRMILPK---------------------------------------------------------------------------VIQAKKACEQE
        NSDVSSLRRMILPK                                                                           VIQAKKA + E
Subjt:  NSDVSSLRRMILPK---------------------------------------------------------------------------VIQAKKACEQE

Query:  IYSDIATNVVINDDIVFQDYDASKAASSIYVPSPTMEDPVSSFIYDTSSAFDNDSPFDFMSGSMTNYSRMGALEGFGSVENLSLDDFY
        IYSDIA + V+N DIVFQD++ASKAA+S+YVPS TM+DPVSSFIYDTSSAFDNDS FDFMS SMTNYSRMG +EGFGSVENLSLDDFY
Subjt:  IYSDIATNVVINDDIVFQDYDASKAASSIYVPSPTMEDPVSSFIYDTSSAFDNDSPFDFMSGSMTNYSRMGALEGFGSVENLSLDDFY

A0A6J1JM90 B3 domain-containing transcription factor FUS3-like isoform X14.3e-5753.31Show/hide
Query:  MMPILDHHHDHNNQLPLPSHHRLLLPADDLAAAVPSPAFPSTALHRKKRMPRNRRRSSSNLPF-FPPSSSSSNNSTPHLPPSRVIDPRNLKFLFQKELKN
        MM I++  H      PL   +RL   + DLAAAV  P F    +HRKKRM R +RRSSSNL F FPPSSSS+     HLPP RVIDPR LKFLFQKELKN
Subjt:  MMPILDHHHDHNNQLPLPSHHRLLLPADDLAAAVPSPAFPSTALHRKKRMPRNRRRSSSNLPF-FPPSSSSSNNSTPHLPPSRVIDPRNLKFLFQKELKN

Query:  SDVSSLRRMILPK---------------------------------------------------------------------------VIQAKKACEQEI
        SDVSSLRRMILPK                                                                           VIQAKKA + EI
Subjt:  SDVSSLRRMILPK---------------------------------------------------------------------------VIQAKKACEQEI

Query:  YSDIATNVVINDDIVFQDYDASKAASSIYVPSPTMEDPVSSFIYDTSSAFDNDSPFDFMSGSMTNYSRMGALEGFGSVENLSLDDFY
        YSDIA + V+N DIVFQD++ASKAA+S+YVPS TM+DPVSSFIYDTSSAFDNDSPFDFMS SMTNYSR+G +EGFGSVENLSLDDFY
Subjt:  YSDIATNVVINDDIVFQDYDASKAASSIYVPSPTMEDPVSSFIYDTSSAFDNDSPFDFMSGSMTNYSRMGALEGFGSVENLSLDDFY

A0A6J1JWX4 B3 domain-containing transcription factor FUS3-like isoform X27.8e-5151.4Show/hide
Query:  MPILDHHHDHNNQLPLPSHHRLLLPADDLAAAVPSPAFPSTALHRKKRMPRNRRRSSSNLPFFPPSSSSSNNSTPHL-PPSRVIDPRNLKFLFQKELKNS
        MP LD+        P P       P  DLAAAVP+ A    +LHRKKRMPR+RRRSSSNL F  PSSS+     P L PP RVIDPR LKFLF+K LKNS
Subjt:  MPILDHHHDHNNQLPLPSHHRLLLPADDLAAAVPSPAFPSTALHRKKRMPRNRRRSSSNLPFFPPSSSSSNNSTPHL-PPSRVIDPRNLKFLFQKELKNS

Query:  DVSSLRRMILPK---------------------------------------------------------------------------VIQAKKACEQEIY
        DVSSLRR+ILPK                                                                           VIQAKKA +QE+Y
Subjt:  DVSSLRRMILPK---------------------------------------------------------------------------VIQAKKACEQEIY

Query:  SDIATNVVINDDIVFQDYDASKAASSIYVPSPTMEDPVSSFIYDTSSAFDNDSPFDFMSGSMTNYSRMGALEGFGSVENLSLDDFY
        + I TNVVIN DIVF DYD +K  +SIYV SPTM+  VSSFIYDTSSAFDNDS FDFMSGSMTNYSRMG LEGFGSVENLSLD+FY
Subjt:  SDIATNVVINDDIVFQDYDASKAASSIYVPSPTMEDPVSSFIYDTSSAFDNDSPFDFMSGSMTNYSRMGALEGFGSVENLSLDDFY

A0A6J1K0G6 B3 domain-containing transcription factor FUS3-like isoform X11.7e-5050.87Show/hide
Query:  MPILDHHHDHNNQLPLPSHHRLLLPADDLAAAVPSPAFPSTALHRKKRMPRNRRRSSSNLPFFPPSSSSSNNSTPHL-PPSRVIDPRNLKFLFQKELKNS
        MP LD+        P P       P  DLAAAVP+ A    +LHRKKRMPR+RRRSSSNL F  PSSS+     P L PP RVIDPR LKFLF+K LKNS
Subjt:  MPILDHHHDHNNQLPLPSHHRLLLPADDLAAAVPSPAFPSTALHRKKRMPRNRRRSSSNLPFFPPSSSSSNNSTPHL-PPSRVIDPRNLKFLFQKELKNS

Query:  DVSSLRRMILPK------------------------------------------------------------------------------VIQAKKACEQ
        DVSSLRR+ILPK                                                                              VIQAKKA +Q
Subjt:  DVSSLRRMILPK------------------------------------------------------------------------------VIQAKKACEQ

Query:  EIYSDIATNVVINDDIVFQDYDASKAASSIYVPSPTMEDPVSSFIYDTSSAFDNDSPFDFMSGSMTNYSRMGALEGFGSVENLSLDDFY
        E+Y+ I TNVVIN DIVF DYD +K  +SIYV SPTM+  VSSFIYDTSSAFDNDS FDFMSGSMTNYSRMG LEGFGSVENLSLD+FY
Subjt:  EIYSDIATNVVINDDIVFQDYDASKAASSIYVPSPTMEDPVSSFIYDTSSAFDNDSPFDFMSGSMTNYSRMGALEGFGSVENLSLDDFY

SwissProt top hitse value%identityAlignment
Q9LW31 B3 domain-containing transcription factor FUS35.3e-2033.21Show/hide
Query:  RKKRMPRNRRRSSS-NLPFFPPSSSSSNNSTPHLPPSRVIDPRNLKFLFQKELKNSDVSSLRRMILPK--------------------------------
        +K+RMPR RR SSS NL  FPP     ++  P   P+R IDPR L+FLFQKELKNSDVSSLRRMILPK                                
Subjt:  RKKRMPRNRRRSSS-NLPFFPPSSSSSNNSTPHLPPSRVIDPRNLKFLFQKELKNSDVSSLRRMILPK--------------------------------

Query:  -------------------------------------------VIQAKKACEQE-----------IYSDIA--TNVVINDDIVFQDYD------------
                                                   VIQA+KA E+E           +Y+++    N V+N D++ QD++            
Subjt:  -------------------------------------------VIQAKKACEQE-----------IYSDIA--TNVVINDDIVFQDYD------------

Query:  ASKAASSIYVPSPTMEDPVSSFIYDTSSAFDNDSPFDFMSGSMTN----YSRMGALEGFGSVENLSLDDFY
         S   S  Y     +     SF+YDT++   ND+P DF+ G  T     YS+ G  +G GSVEN+SLDDFY
Subjt:  ASKAASSIYVPSPTMEDPVSSFIYDTSSAFDNDSPFDFMSGSMTN----YSRMGALEGFGSVENLSLDDFY

Arabidopsis top hitse value%identityAlignment
AT3G26790.1 AP2/B3-like transcriptional factor family protein3.7e-2133.21Show/hide
Query:  RKKRMPRNRRRSSS-NLPFFPPSSSSSNNSTPHLPPSRVIDPRNLKFLFQKELKNSDVSSLRRMILPK--------------------------------
        +K+RMPR RR SSS NL  FPP     ++  P   P+R IDPR L+FLFQKELKNSDVSSLRRMILPK                                
Subjt:  RKKRMPRNRRRSSS-NLPFFPPSSSSSNNSTPHLPPSRVIDPRNLKFLFQKELKNSDVSSLRRMILPK--------------------------------

Query:  -------------------------------------------VIQAKKACEQE-----------IYSDIA--TNVVINDDIVFQDYD------------
                                                   VIQA+KA E+E           +Y+++    N V+N D++ QD++            
Subjt:  -------------------------------------------VIQAKKACEQE-----------IYSDIA--TNVVINDDIVFQDYD------------

Query:  ASKAASSIYVPSPTMEDPVSSFIYDTSSAFDNDSPFDFMSGSMTN----YSRMGALEGFGSVENLSLDDFY
         S   S  Y     +     SF+YDT++   ND+P DF+ G  T     YS+ G  +G GSVEN+SLDDFY
Subjt:  ASKAASSIYVPSPTMEDPVSSFIYDTSSAFDNDSPFDFMSGSMTN----YSRMGALEGFGSVENLSLDDFY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGCCCATTTTGGACCACCACCATGATCATAATAATCAATTACCACTTCCCTCTCACCACCGTCTCCTCCTCCCCGCCGATGATCTCGCCGCCGCCGTCCCCTCCCC
TGCCTTCCCTTCTACTGCTCTCCATCGCAAGAAACGGATGCCTAGAAACCGCCGCCGCTCTTCTTCTAATCTTCCTTTCTTTCCTCCTTCTTCTTCTTCTTCAAATAACA
GTACTCCCCATCTCCCTCCTTCCCGGGTAATTGATCCAAGGAACTTGAAGTTTCTTTTTCAGAAGGAGCTTAAGAACAGTGATGTTAGTTCTCTGAGGAGAATGATACTC
CCAAAGGTGATTCAAGCAAAAAAGGCTTGCGAGCAAGAAATATATTCCGACATAGCAACCAACGTCGTGATCAACGACGACATTGTGTTTCAAGACTACGATGCTAGCAA
AGCTGCCAGCTCCATATACGTGCCTAGTCCAACCATGGAAGATCCCGTGTCGTCATTCATCTATGACACTAGTTCTGCCTTCGACAACGATTCACCTTTCGACTTTATGA
GTGGATCAATGACCAACTACTCGAGAATGGGAGCTCTCGAAGGCTTTGGATCGGTCGAGAACTTGTCTCTTGATGACTTCTACTAA
mRNA sequenceShow/hide mRNA sequence
ATGATGCCCATTTTGGACCACCACCATGATCATAATAATCAATTACCACTTCCCTCTCACCACCGTCTCCTCCTCCCCGCCGATGATCTCGCCGCCGCCGTCCCCTCCCC
TGCCTTCCCTTCTACTGCTCTCCATCGCAAGAAACGGATGCCTAGAAACCGCCGCCGCTCTTCTTCTAATCTTCCTTTCTTTCCTCCTTCTTCTTCTTCTTCAAATAACA
GTACTCCCCATCTCCCTCCTTCCCGGGTAATTGATCCAAGGAACTTGAAGTTTCTTTTTCAGAAGGAGCTTAAGAACAGTGATGTTAGTTCTCTGAGGAGAATGATACTC
CCAAAGGTGATTCAAGCAAAAAAGGCTTGCGAGCAAGAAATATATTCCGACATAGCAACCAACGTCGTGATCAACGACGACATTGTGTTTCAAGACTACGATGCTAGCAA
AGCTGCCAGCTCCATATACGTGCCTAGTCCAACCATGGAAGATCCCGTGTCGTCATTCATCTATGACACTAGTTCTGCCTTCGACAACGATTCACCTTTCGACTTTATGA
GTGGATCAATGACCAACTACTCGAGAATGGGAGCTCTCGAAGGCTTTGGATCGGTCGAGAACTTGTCTCTTGATGACTTCTACTAA
Protein sequenceShow/hide protein sequence
MMPILDHHHDHNNQLPLPSHHRLLLPADDLAAAVPSPAFPSTALHRKKRMPRNRRRSSSNLPFFPPSSSSSNNSTPHLPPSRVIDPRNLKFLFQKELKNSDVSSLRRMIL
PKVIQAKKACEQEIYSDIATNVVINDDIVFQDYDASKAASSIYVPSPTMEDPVSSFIYDTSSAFDNDSPFDFMSGSMTNYSRMGALEGFGSVENLSLDDFY