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HG10009754 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10009754
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionpsbQ-like protein 3, chloroplastic
Genome locationChr06:9763188..9763719
RNA-Seq ExpressionHG10009754
SyntenyHG10009754
Gene Ontology termsGO:0009767 - photosynthetic electron transport chain (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0009654 - photosystem II oxygen evolving complex (cellular component)
GO:0019898 - extrinsic component of membrane (cellular component)
GO:0005509 - calcium ion binding (molecular function)
GO:0045156 - electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity (molecular function)
InterPro domainsIPR008797 - Oxygen-evolving enhancer protein 3
IPR023222 - PsbQ-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148913.1 psbQ-like protein 3, chloroplastic [Cucumis sativus]8.7e-5590.77Show/hide
Query:  MASSVTAIPVEVANALDLKLIAPEQSLDEAETGIRGHVEALLQVRGLIESEAWKEAQKRLRSSSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRM
        MASSVTAIP EVANALDLKLIAPEQSLDEAE+GIR H EALLQVR LIESEAWKEAQKRLRS+SALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRM
Subjt:  MASSVTAIPVEVANALDLKLIAPEQSLDEAETGIRGHVEALLQVRGLIESEAWKEAQKRLRSSSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRM

Query:  DYAARVKDVEEVWECYNKIEMAISDILSRI
        DYAAR KDV  VWE Y K+EMAISDILSRI
Subjt:  DYAARVKDVEEVWECYNKIEMAISDILSRI

XP_008463126.1 PREDICTED: psbQ-like protein 3, chloroplastic [Cucumis melo]1.3e-5389.23Show/hide
Query:  MASSVTAIPVEVANALDLKLIAPEQSLDEAETGIRGHVEALLQVRGLIESEAWKEAQKRLRSSSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRM
        MASSVTAIP EVANAL+LKLIAPEQSLDEAE GIRGH EALLQVR L+ESEAWKEAQKRLRS+SALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRM
Subjt:  MASSVTAIPVEVANALDLKLIAPEQSLDEAETGIRGHVEALLQVRGLIESEAWKEAQKRLRSSSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRM

Query:  DYAARVKDVEEVWECYNKIEMAISDILSRI
        DYAAR KD   V ECY K+EMAISDILSRI
Subjt:  DYAARVKDVEEVWECYNKIEMAISDILSRI

XP_022991100.1 psbQ-like protein 3, chloroplastic isoform X1 [Cucurbita maxima]5.8e-5182.17Show/hide
Query:  ASSVTAIPVEVANALDLKLIAPEQSLDEAETGIRGHVEALLQVRGLIESEAWKEAQKRLRSSSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMD
        +SSV + PV++ NALDLKLIAPEQS +EAE+GIRGH EA+LQVRGLIESE+WKEAQK+LRSSS LLKQDLYTIIEYKPPAERP LRKLYSLLFNNVTRMD
Subjt:  ASSVTAIPVEVANALDLKLIAPEQSLDEAETGIRGHVEALLQVRGLIESEAWKEAQKRLRSSSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMD

Query:  YAARVKDVEEVWECYNKIEMAISDILSRI
        YAAR KD E VW+CY+ I MAISDILSRI
Subjt:  YAARVKDVEEVWECYNKIEMAISDILSRI

XP_023551782.1 psbQ-like protein 3, chloroplastic [Cucurbita pepo subsp. pepo]4.5e-5182.17Show/hide
Query:  ASSVTAIPVEVANALDLKLIAPEQSLDEAETGIRGHVEALLQVRGLIESEAWKEAQKRLRSSSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMD
        +SSV + PV++ANALDLKLIAPEQS +EAE+GIRGH EA+LQVRGLIESE+WKEAQK+LRSSS LLKQDLYTIIEYKPPAERP LR+LYSLLFNNVTRMD
Subjt:  ASSVTAIPVEVANALDLKLIAPEQSLDEAETGIRGHVEALLQVRGLIESEAWKEAQKRLRSSSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMD

Query:  YAARVKDVEEVWECYNKIEMAISDILSRI
        YAAR KD E VW+CY+ I MAISDILSRI
Subjt:  YAARVKDVEEVWECYNKIEMAISDILSRI

XP_038877067.1 psbQ-like protein 3, chloroplastic [Benincasa hispida]8.7e-5589.23Show/hide
Query:  MASSVTAIPVEVANALDLKLIAPEQSLDEAETGIRGHVEALLQVRGLIESEAWKEAQKRLRSSSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRM
        MASSVTA PVE+ANALDLKLIAPEQSLDEAE+GIR H EALLQVR LIESEAWKEAQKRLRSSS LLKQDLYTIIEYKPPAERPALRKLYS+LFNNVTRM
Subjt:  MASSVTAIPVEVANALDLKLIAPEQSLDEAETGIRGHVEALLQVRGLIESEAWKEAQKRLRSSSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRM

Query:  DYAARVKDVEEVWECYNKIEMAISDILSRI
        DYAAR KDVE VW+CYN I +AISDILSRI
Subjt:  DYAARVKDVEEVWECYNKIEMAISDILSRI

TrEMBL top hitse value%identityAlignment
A0A0A0KT23 Uncharacterized protein4.2e-5590.77Show/hide
Query:  MASSVTAIPVEVANALDLKLIAPEQSLDEAETGIRGHVEALLQVRGLIESEAWKEAQKRLRSSSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRM
        MASSVTAIP EVANALDLKLIAPEQSLDEAE+GIR H EALLQVR LIESEAWKEAQKRLRS+SALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRM
Subjt:  MASSVTAIPVEVANALDLKLIAPEQSLDEAETGIRGHVEALLQVRGLIESEAWKEAQKRLRSSSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRM

Query:  DYAARVKDVEEVWECYNKIEMAISDILSRI
        DYAAR KDV  VWE Y K+EMAISDILSRI
Subjt:  DYAARVKDVEEVWECYNKIEMAISDILSRI

A0A1S3CIJ1 psbQ-like protein 3, chloroplastic6.1e-5489.23Show/hide
Query:  MASSVTAIPVEVANALDLKLIAPEQSLDEAETGIRGHVEALLQVRGLIESEAWKEAQKRLRSSSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRM
        MASSVTAIP EVANAL+LKLIAPEQSLDEAE GIRGH EALLQVR L+ESEAWKEAQKRLRS+SALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRM
Subjt:  MASSVTAIPVEVANALDLKLIAPEQSLDEAETGIRGHVEALLQVRGLIESEAWKEAQKRLRSSSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRM

Query:  DYAARVKDVEEVWECYNKIEMAISDILSRI
        DYAAR KD   V ECY K+EMAISDILSRI
Subjt:  DYAARVKDVEEVWECYNKIEMAISDILSRI

A0A5A7VLN5 PsbQ-like protein 36.1e-5489.23Show/hide
Query:  MASSVTAIPVEVANALDLKLIAPEQSLDEAETGIRGHVEALLQVRGLIESEAWKEAQKRLRSSSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRM
        MASSVTAIP EVANAL+LKLIAPEQSLDEAE GIRGH EALLQVR L+ESEAWKEAQKRLRS+SALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRM
Subjt:  MASSVTAIPVEVANALDLKLIAPEQSLDEAETGIRGHVEALLQVRGLIESEAWKEAQKRLRSSSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRM

Query:  DYAARVKDVEEVWECYNKIEMAISDILSRI
        DYAAR KD   V ECY K+EMAISDILSRI
Subjt:  DYAARVKDVEEVWECYNKIEMAISDILSRI

A0A6J1HES6 psbQ-like protein 3, chloroplastic isoform X11.2e-4981.4Show/hide
Query:  ASSVTAIPVEVANALDLKLIAPEQSLDEAETGIRGHVEALLQVRGLIESEAWKEAQKRLRSSSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMD
        +SSV + PV +ANALDLKLIAPEQS +EAE+GIRGH EA+LQVRGLIESE+WKEAQK+LR+SS LLKQDLYTIIEYKPPAERP LRKLYSLLFNNVTRMD
Subjt:  ASSVTAIPVEVANALDLKLIAPEQSLDEAETGIRGHVEALLQVRGLIESEAWKEAQKRLRSSSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMD

Query:  YAARVKDVEEVWECYNKIEMAISDILSRI
        YAAR KD E V +CY+ I MAISDILSRI
Subjt:  YAARVKDVEEVWECYNKIEMAISDILSRI

A0A6J1JRX6 psbQ-like protein 3, chloroplastic isoform X12.8e-5182.17Show/hide
Query:  ASSVTAIPVEVANALDLKLIAPEQSLDEAETGIRGHVEALLQVRGLIESEAWKEAQKRLRSSSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMD
        +SSV + PV++ NALDLKLIAPEQS +EAE+GIRGH EA+LQVRGLIESE+WKEAQK+LRSSS LLKQDLYTIIEYKPPAERP LRKLYSLLFNNVTRMD
Subjt:  ASSVTAIPVEVANALDLKLIAPEQSLDEAETGIRGHVEALLQVRGLIESEAWKEAQKRLRSSSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMD

Query:  YAARVKDVEEVWECYNKIEMAISDILSRI
        YAAR KD E VW+CY+ I MAISDILSRI
Subjt:  YAARVKDVEEVWECYNKIEMAISDILSRI

SwissProt top hitse value%identityAlignment
Q2V4B2 PsbQ-like protein 3, chloroplastic2.1e-1944.95Show/hide
Query:  PEQSLDEAETGIRGHVEALLQVRG-LIESEAWKEAQKRLRSSSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARVKDVEEVWECYNKIEM
        PE++++ A+ G+R + E + +++  +IE + WKE  K LR S++ +KQD Y II+ KPP +RP  R LYS LFN++T+MDYAAR  D  +V E Y  I  
Subjt:  PEQSLDEAETGIRGHVEALLQVRG-LIESEAWKEAQKRLRSSSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARVKDVEEVWECYNKIEM

Query:  AISDILSRI
         + DI  RI
Subjt:  AISDILSRI

Q41048 Oxygen-evolving enhancer protein 3-1, chloroplastic2.6e-0928.43Show/hide
Query:  EAETGIRGHVEALLQVRGLIESEAWKEAQKRLRSSSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARVKDVEEVWECYNKIEMAISDILS
        EA   ++   + ++ ++ LI+ +AW   Q  LR  ++ L+ DL T+I  KP  E+ +L++L   LF+ +  +D+AA++K   E  + +   + A+ D+L+
Subjt:  EAETGIRGHVEALLQVRGLIESEAWKEAQKRLRSSSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARVKDVEEVWECYNKIEMAISDILS

Query:  RI
        ++
Subjt:  RI

Q41806 Oxygen-evolving enhancer protein 3-2, chloroplastic5.7e-0928.43Show/hide
Query:  EAETGIRGHVEALLQVRGLIESEAWKEAQKRLRSSSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARVKDVEEVWECYNKIEMAISDILS
        EA   ++   + ++ ++ LI+ +AW   Q  LR  ++ L+ DL T+I  KP  E+ +L++L   LF+ +  +D+AA++K   E  + +   + A+ D+L+
Subjt:  EAETGIRGHVEALLQVRGLIESEAWKEAQKRLRSSSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARVKDVEEVWECYNKIEMAISDILS

Query:  RI
        ++
Subjt:  RI

Q9XFT3 Oxygen-evolving enhancer protein 3-1, chloroplastic8.8e-1031.37Show/hide
Query:  EAETGIRGHVEALLQVRGLIESEAWKEAQKRLRSSSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARVKDVEEVWECYNKIEMAISDILS
        EA    +   + ++ V+ LI+ +AW   Q  LRS ++ L+ DL TII  KP  E+ +L+ L + LF+ +  +DYAA+ K   +  + Y +   A++++L+
Subjt:  EAETGIRGHVEALLQVRGLIESEAWKEAQKRLRSSSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARVKDVEEVWECYNKIEMAISDILS

Query:  RI
        ++
Subjt:  RI

Arabidopsis top hitse value%identityAlignment
AT2G01918.1 PsbQ-like 31.5e-2044.95Show/hide
Query:  PEQSLDEAETGIRGHVEALLQVRG-LIESEAWKEAQKRLRSSSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARVKDVEEVWECYNKIEM
        PE++++ A+ G+R + E + +++  +IE + WKE  K LR S++ +KQD Y II+ KPP +RP  R LYS LFN++T+MDYAAR  D  +V E Y  I  
Subjt:  PEQSLDEAETGIRGHVEALLQVRG-LIESEAWKEAQKRLRSSSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARVKDVEEVWECYNKIEM

Query:  AISDILSRI
         + DI  RI
Subjt:  AISDILSRI

AT3G01440.1 PsbQ-like 12.6e-0425.56Show/hide
Query:  LLQVRGLIESEAWKEAQKRLRSSSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARVKDVEEVWECYNKIEMAISDILSRI
        LL +  LI  +     +K LR  S  L  D   +I      ++  L  L + LF+N  +++ AA+ K++ E   CY   +  + ++++R+
Subjt:  LLQVRGLIESEAWKEAQKRLRSSSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARVKDVEEVWECYNKIEMAISDILSRI

AT4G21280.1 photosystem II subunit QA6.3e-1131.37Show/hide
Query:  EAETGIRGHVEALLQVRGLIESEAWKEAQKRLRSSSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARVKDVEEVWECYNKIEMAISDILS
        EA    +   + ++ V+ LI+ +AW   Q  LRS ++ L+ DL TII  KP  E+ +L+ L + LF+ +  +DYAA+ K   +  + Y +   A++++L+
Subjt:  EAETGIRGHVEALLQVRGLIESEAWKEAQKRLRSSSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARVKDVEEVWECYNKIEMAISDILS

Query:  RI
        ++
Subjt:  RI

AT4G21280.2 photosystem II subunit QA6.3e-1131.37Show/hide
Query:  EAETGIRGHVEALLQVRGLIESEAWKEAQKRLRSSSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARVKDVEEVWECYNKIEMAISDILS
        EA    +   + ++ V+ LI+ +AW   Q  LRS ++ L+ DL TII  KP  E+ +L+ L + LF+ +  +DYAA+ K   +  + Y +   A++++L+
Subjt:  EAETGIRGHVEALLQVRGLIESEAWKEAQKRLRSSSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARVKDVEEVWECYNKIEMAISDILS

Query:  RI
        ++
Subjt:  RI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCATCAGTAACAGCGATACCGGTGGAAGTAGCAAATGCTTTGGATCTGAAATTGATCGCGCCGGAGCAGAGCTTGGACGAGGCTGAGACCGGAATCAGAGGCCA
CGTGGAAGCGCTTTTGCAGGTGAGAGGCTTAATCGAATCGGAGGCTTGGAAGGAAGCTCAGAAGCGGTTGAGAAGCAGTTCGGCGTTGCTGAAACAAGATCTGTACACTA
TAATTGAATACAAACCGCCTGCGGAGAGGCCTGCTCTCAGGAAACTCTATTCTCTTCTCTTCAACAATGTTACGCGAATGGATTATGCAGCGAGAGTTAAAGATGTAGAA
GAAGTTTGGGAGTGCTACAATAAGATTGAGATGGCAATCTCTGATATTTTGTCAAGAATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCATCAGTAACAGCGATACCGGTGGAAGTAGCAAATGCTTTGGATCTGAAATTGATCGCGCCGGAGCAGAGCTTGGACGAGGCTGAGACCGGAATCAGAGGCCA
CGTGGAAGCGCTTTTGCAGGTGAGAGGCTTAATCGAATCGGAGGCTTGGAAGGAAGCTCAGAAGCGGTTGAGAAGCAGTTCGGCGTTGCTGAAACAAGATCTGTACACTA
TAATTGAATACAAACCGCCTGCGGAGAGGCCTGCTCTCAGGAAACTCTATTCTCTTCTCTTCAACAATGTTACGCGAATGGATTATGCAGCGAGAGTTAAAGATGTAGAA
GAAGTTTGGGAGTGCTACAATAAGATTGAGATGGCAATCTCTGATATTTTGTCAAGAATTTAG
Protein sequenceShow/hide protein sequence
MASSVTAIPVEVANALDLKLIAPEQSLDEAETGIRGHVEALLQVRGLIESEAWKEAQKRLRSSSALLKQDLYTIIEYKPPAERPALRKLYSLLFNNVTRMDYAARVKDVE
EVWECYNKIEMAISDILSRI