; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10009757 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10009757
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRNase H domain-containing protein
Genome locationChr06:9814681..9819829
RNA-Seq ExpressionHG10009757
SyntenyHG10009757
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8390802.1 hypothetical protein HHK36_025330 [Tetracentron sinense]4.2e-1429.07Show/hide
Query:  LERSLDQALEKEEIYWKQRSCDNWLKWGDRNTEWFHKQASSKRVKNTIHKVLNSDGGWAISDEDLEQCGVLGVVGCGLWADRNSQGRHLPIVETSVRVAW
        L R LD    +EE +W+Q+S  +WL  GDRNT++F      +R +N I+ + N DG W  +D ++    ++      L++    +G  +  +  SVR   
Subjt:  LERSLDQALEKEEIYWKQRSCDNWLKWGDRNTEWFHKQASSKRVKNTIHKVLNSDGGWAISDEDLEQCGVLGVVGCGLWADRNSQGRHLPIVETSVRVAW

Query:  VASYFSDFCTANLLGTCLRSSSRVAASISMEGPSIWLPPPTGEFKLNTDVACRLESNMVGIGAVIRNSYGDLVVAAADCIP-----SKVAALEGEALALL
         A   ++ C    LG  L SS+    + ++ G   W  P  G  K N D A  L  +  G G V+R+S G+++     C P     S++A +E    A+ 
Subjt:  VASYFSDFCTANLLGTCLRSSSRVAASISMEGPSIWLPPPTGEFKLNTDVACRLESNMVGIGAVIRNSYGDLVVAAADCIP-----SKVAALEGEALALL

Query:  FGLKLVQRMGISLVQVEIDSKALVNFI
        + L L    G S + +E DS   ++F+
Subjt:  FGLKLVQRMGISLVQVEIDSKALVNFI

KAG5537975.1 hypothetical protein RHGRI_025166 [Rhododendron griersonianum]2.9e-1525.87Show/hide
Query:  CVEQLQKWGKGKAKEVGSDIAKKRSC-LQEAYHRGGGP---NFDEICHLERSLDQALEKEEIYWKQRSCDNWLKWGDRNTEWFHKQASSKRVKNTIHKVL
        C + L++W    AKE G++  K  +   Q A  +   P   N  E+  +++ ++  L++EE+Y+ QRS  NWL++GDRNT +FH     +R +N + ++ 
Subjt:  CVEQLQKWGKGKAKEVGSDIAKKRSC-LQEAYHRGGGP---NFDEICHLERSLDQALEKEEIYWKQRSCDNWLKWGDRNTEWFHKQASSKRVKNTIHKVL

Query:  NSDGGWAISDEDLEQCGVLGVVGCGLWADRNSQG-----------------RHLPI--VETSVRVAWVASYFSDFCTANLLGTCLRSSSRVAASISMEGP
        + +G WA S+ D+ Q  +L      L+    S+                   H+P+   ET  R  +  S F    +  + GT  + +++++        
Subjt:  NSDGGWAISDEDLEQCGVLGVVGCGLWADRNSQG-----------------RHLPI--VETSVRVAWVASYFSDFCTANLLGTCLRSSSRVAASISMEGP

Query:  SIWLPPPTGEFKLNTDVACRLESNMVGIGAVIRNSYGDLVVAAADCIPSKVAALEGEALALLFGLKLVQRMGISLVQVEIDSKALV
        + W  P  G  K N DVA +       I  V+RN  G+++   +  + +  +  +GEALA+    +L+    IS   +E D+K ++
Subjt:  SIWLPPPTGEFKLNTDVACRLESNMVGIGAVIRNSYGDLVVAAADCIPSKVAALEGEALALLFGLKLVQRMGISLVQVEIDSKALV

KAG5555977.1 hypothetical protein RHGRI_006568 [Rhododendron griersonianum]2.4e-1726.74Show/hide
Query:  CVEQLQKWGKGKAKEVGSDIAKKRSC-LQEAYHRGGGP---NFDEICHLERSLDQALEKEEIYWKQRSCDNWLKWGDRNTEWFHKQASSKRVKNTIHKVL
        C + L++W    AKE G++  K  +   Q A  +   P   N  E+  +++ ++  L++EE+Y+ QRS  NWL++GDRNT +FH     +R +N + ++ 
Subjt:  CVEQLQKWGKGKAKEVGSDIAKKRSC-LQEAYHRGGGP---NFDEICHLERSLDQALEKEEIYWKQRSCDNWLKWGDRNTEWFHKQASSKRVKNTIHKVL

Query:  NSDGGWAISDEDLEQ------------------CGVLGVVGCGLWADRNS-QGRHLPI--VETSVRVAWVASYFSDFCTANLLGTCLRSSSRVAASISME
        + +G WA SD D+ Q                   G +  +   +W  RN     H+P+   ET  R  +  S F    +  + GT  + ++ ++      
Subjt:  NSDGGWAISDEDLEQ------------------CGVLGVVGCGLWADRNS-QGRHLPI--VETSVRVAWVASYFSDFCTANLLGTCLRSSSRVAASISME

Query:  GPSIWLPPPTGEFKLNTDVACRLESNMVGIGAVIRNSYGDLVVAAADCIPSKVAALEGEALALLFGLKLVQRMGISLVQVEIDSKALV
          + W  P  G  K N DVA +       I  V+RN  G+++   +  + +  +A +GEALA+    +L+    IS   +E D+K  +
Subjt:  GPSIWLPPPTGEFKLNTDVACRLESNMVGIGAVIRNSYGDLVVAAADCIPSKVAALEGEALALLFGLKLVQRMGISLVQVEIDSKALV

RYR79715.1 hypothetical protein Ahy_A01g004533 [Arachis hypogaea]2.9e-1526.5Show/hide
Query:  MPTCVEQLQKWGKGKAKEVGSDIAKKRSCLQEAYHRG-GGPNFDEICHLERSLDQALEKEEIYWKQRSCDNWLKWGDRNTEWFHKQASSKRVKNTIHKVL
        M  C E+L KW K   K    +I K+   L+ A  R        EI +L+  + +  ++EE +W QRS   WLK+GD+NT +FH     +R +N I K+ 
Subjt:  MPTCVEQLQKWGKGKAKEVGSDIAKKRSCLQEAYHRG-GGPNFDEICHLERSLDQALEKEEIYWKQRSCDNWLKWGDRNTEWFHKQASSKRVKNTIHKVL

Query:  NSDGGWAISDEDLEQCGV------------LGVVGCGLWADRNSQGRHLPIVETSVRVAWVASYFSDFCTANLLGTCLRSSSRVAASISMEGPSIWLPPP
        +  G W   ++ +    +            +G +   +W  RN    H       + +        DF  A+++     SS+    ++       W PPP
Subjt:  NSDGGWAISDEDLEQCGV------------LGVVGCGLWADRNSQGRHLPIVETSVRVAWVASYFSDFCTANLLGTCLRSSSRVAASISMEGPSIWLPPP

Query:  TGEFKLNTDVACRLESNMVGIGAVIRNSYGDLVVAAADCIPSKVAALEGEALALLFGLKLVQRMGISLVQVEIDSKALVNFIK
         G  K N D A R   +     AV R+  G L+ A+   I +  + L  EA A+   L + +   +  + VE DS  L+  +K
Subjt:  TGEFKLNTDVACRLESNMVGIGAVIRNSYGDLVVAAADCIPSKVAALEGEALALLFGLKLVQRMGISLVQVEIDSKALVNFIK

TXG51584.1 hypothetical protein EZV62_024108 [Acer yangbiense]1.2e-1329.52Show/hide
Query:  MPTCVEQLQKWGKGKAKEVGSDIAKKRSCLQEAYHRGGGPNFDEICHLERSLDQALEKEEIYWKQRSCDNWLKWG----DRNTEWFHKQASSKRVKNTIH
        M  C  +L KW + K + + ++I+  +  L +A       ++  +  +ER LD  LEKEE YWKQ+S  +WLK G    + +T+    ++   +    I 
Subjt:  MPTCVEQLQKWGKGKAKEVGSDIAKKRSCLQEAYHRGGGPNFDEICHLERSLDQALEKEEIYWKQRSCDNWLKWG----DRNTEWFHKQASSKRVKNTIH

Query:  KVLNSDGGWAISDEDLEQCGVLGVVGCGLWADRNSQGRHLPIVETSVRVAWVASYFSDFCTANLLGTCLRSSSRVAASISMEGPSIWLPPPTGEFKLNTD
        + L     W + ++++    +L V+   LW  RN                W A Y  DF  AN         SR    +       W+P   G FK+NTD
Subjt:  KVLNSDGGWAISDEDLEQCGVLGVVGCGLWADRNSQGRHLPIVETSVRVAWVASYFSDFCTANLLGTCLRSSSRVAASISMEGPSIWLPPPTGEFKLNTD

Query:  VACRLESNMVGIGAVIRNSYGDLVVAA
         A R+E  +VG G VIR+S G +  AA
Subjt:  VACRLESNMVGIGAVIRNSYGDLVVAA

TrEMBL top hitse value%identityAlignment
A0A445EWB3 RNase H domain-containing protein1.4e-1526.5Show/hide
Query:  MPTCVEQLQKWGKGKAKEVGSDIAKKRSCLQEAYHRG-GGPNFDEICHLERSLDQALEKEEIYWKQRSCDNWLKWGDRNTEWFHKQASSKRVKNTIHKVL
        M  C E+L KW K   K    +I K+   L+ A  R        EI +L+  + +  ++EE +W QRS   WLK+GD+NT +FH     +R +N I K+ 
Subjt:  MPTCVEQLQKWGKGKAKEVGSDIAKKRSCLQEAYHRG-GGPNFDEICHLERSLDQALEKEEIYWKQRSCDNWLKWGDRNTEWFHKQASSKRVKNTIHKVL

Query:  NSDGGWAISDEDLEQCGV------------LGVVGCGLWADRNSQGRHLPIVETSVRVAWVASYFSDFCTANLLGTCLRSSSRVAASISMEGPSIWLPPP
        +  G W   ++ +    +            +G +   +W  RN    H       + +        DF  A+++     SS+    ++       W PPP
Subjt:  NSDGGWAISDEDLEQCGV------------LGVVGCGLWADRNSQGRHLPIVETSVRVAWVASYFSDFCTANLLGTCLRSSSRVAASISMEGPSIWLPPP

Query:  TGEFKLNTDVACRLESNMVGIGAVIRNSYGDLVVAAADCIPSKVAALEGEALALLFGLKLVQRMGISLVQVEIDSKALVNFIK
         G  K N D A R   +     AV R+  G L+ A+   I +  + L  EA A+   L + +   +  + VE DS  L+  +K
Subjt:  TGEFKLNTDVACRLESNMVGIGAVIRNSYGDLVVAAADCIPSKVAALEGEALALLFGLKLVQRMGISLVQVEIDSKALVNFIK

A0A5C7H3L7 zf-CCHC_4 domain-containing protein6.0e-1429.52Show/hide
Query:  MPTCVEQLQKWGKGKAKEVGSDIAKKRSCLQEAYHRGGGPNFDEICHLERSLDQALEKEEIYWKQRSCDNWLKWG----DRNTEWFHKQASSKRVKNTIH
        M  C  +L KW + K + + ++I+  +  L +A       ++  +  +ER LD  LEKEE YWKQ+S  +WLK G    + +T+    ++   +    I 
Subjt:  MPTCVEQLQKWGKGKAKEVGSDIAKKRSCLQEAYHRGGGPNFDEICHLERSLDQALEKEEIYWKQRSCDNWLKWG----DRNTEWFHKQASSKRVKNTIH

Query:  KVLNSDGGWAISDEDLEQCGVLGVVGCGLWADRNSQGRHLPIVETSVRVAWVASYFSDFCTANLLGTCLRSSSRVAASISMEGPSIWLPPPTGEFKLNTD
        + L     W + ++++    +L V+   LW  RN                W A Y  DF  AN         SR    +       W+P   G FK+NTD
Subjt:  KVLNSDGGWAISDEDLEQCGVLGVVGCGLWADRNSQGRHLPIVETSVRVAWVASYFSDFCTANLLGTCLRSSSRVAASISMEGPSIWLPPPTGEFKLNTD

Query:  VACRLESNMVGIGAVIRNSYGDLVVAA
         A R+E  +VG G VIR+S G +  AA
Subjt:  VACRLESNMVGIGAVIRNSYGDLVVAA

A0A803NVU4 Uncharacterized protein8.3e-1627.91Show/hide
Query:  CVEQLQKW---GKGKAKEVGSDIAKKRSCLQEAYHRGGGPNFDEICHLERSLDQALEKEEIYWKQRSCDNWLKWGDRNTEWFHKQASSKRVKNTIHKVLN
        C   LQKW     G  K+  +D   +   L  + HR      + + + E  LD+ LE+EEIYW+QRS  +WL  GDRNT++ H +AS  ++K  I +  N
Subjt:  CVEQLQKW---GKGKAKEVGSDIAKKRSCLQEAYHRGGGPNFDEICHLERSLDQALEKEEIYWKQRSCDNWLKWGDRNTEWFHKQASSKRVKNTIHKVLN

Query:  S----------------------DGGWAISDEDLEQCGVLGVVGCGLWADRNSQGRHLPIVETSVRVAWVASYFSDFCTANLLGTCLRSSSRVA--ASIS
                                  W  +   L  C +     CG W+   SQ    P       +A +       C   L  T   S    +  AS+ 
Subjt:  S----------------------DGGWAISDEDLEQCGVLGVVGCGLWADRNSQGRHLPIVETSVRVAWVASYFSDFCTANLLGTCLRSSSRVA--ASIS

Query:  MEGPSI----WLPPPTGEFKLNTDVACRLESNMVGIGAVIRNSYGDLVVAAADCIPSKVAALEGEALALLFGLKLVQRMGISLVQVEIDSKALVNFIKKD
           P++    W PPP G  K+N D A      + GIGA+IR+S G++V A +  +    A+ E EA+A+   L    ++ + +  VE D+  + N + K 
Subjt:  MEGPSI----WLPPPTGEFKLNTDVACRLESNMVGIGAVIRNSYGDLVVAAADCIPSKVAALEGEALALLFGLKLVQRMGISLVQVEIDSKALVNFIKKD

Query:  T
        +
Subjt:  T

A0A803PWX1 Uncharacterized protein5.4e-1534.62Show/hide
Query:  CVEQLQKWGKGKAKEVGSDIAKKRSCLQEAYHRGGGPNFDEICHLERSLDQALEKEEIYWKQRSCDNWLKWGDRNTEWFHKQASSKRVKNTIHKVLNSDG
        C + LQ W K K   + ++IAK +  L E   +     ++ I H+E  L+  LEK+E YW+QRS   WL+WGDRNT++FH +ASS+R KN I  + +  G
Subjt:  CVEQLQKWGKGKAKEVGSDIAKKRSCLQEAYHRGGGPNFDEICHLERSLDQALEKEEIYWKQRSCDNWLKWGDRNTEWFHKQASSKRVKNTIHKVLNSDG

Query:  GWAISDEDLEQCGVLGVVGCGLW----ADRNSQGRHLPIVETSVRVAWVASYFSDF
         W   D+ L  C ++     GL+     D+      L +V+  V ++       DF
Subjt:  GWAISDEDLEQCGVLGVVGCGLW----ADRNSQGRHLPIVETSVRVAWVASYFSDF

A0A803PWX1 Uncharacterized protein4.9e-0826.92Show/hide
Query:  VVGCGLWADRNS--QGRHLPIVETSVRVAWVASYFSDFCTANLLGTCLRSSSRVAASISMEGPSI-WLPPPTGEFKLNTDVACRLESNMVGIGAVIRNSY
        ++   LW  RNS   G H P  + S  + W + +  +F             + VA  +        W PP  G FK+N D   +   N+ G+ +V+R+  
Subjt:  VVGCGLWADRNS--QGRHLPIVETSVRVAWVASYFSDFCTANLLGTCLRSSSRVAASISMEGPSI-WLPPPTGEFKLNTDVACRLESNMVGIGAVIRNSY

Query:  GDLVVAAADCIPSKVAALEGEALALLFGLKLVQRMGISLVQVEIDSKALVNFIKKD
        G ++VAA   +  K + L+GE  A+L G++   +  +    VE D    VN + K+
Subjt:  GDLVVAAADCIPSKVAALEGEALALLFGLKLVQRMGISLVQVEIDSKALVNFIKKD

A0A803PWX1 Uncharacterized protein4.6e-1429.38Show/hide
Query:  LDQALEKEEIYWKQRSCDNWLKWGDRNTEWFHKQASSKRVKNTIHKVLNSDGGWAISD-----------------EDLEQCGVLGVVGC--GLWADRNSQ
        L+  LE+EEIYW+QRS   WL  GDRNT++FH ++++++  N I  +LN+ G    S                   D++   +   + C   +  D ++Q
Subjt:  LDQALEKEEIYWKQRSCDNWLKWGDRNTEWFHKQASSKRVKNTIHKVLNSDGGWAISD-----------------EDLEQCGVLGVVGC--GLWADRNSQ

Query:  GRHLPIVETSVRVAWVASYFSDFCTANLLGTCLRSSSRVAASISMEGPSIWLPPPTGEFKLNTDVACRLESNMVGIGAVIRNSYGDLVVAAADCIPSKVA
            P +   V              ++     L++    AA I       W PP  G FKLN D A +  +N  GI  +IRN YG++V A +  +   + 
Subjt:  GRHLPIVETSVRVAWVASYFSDFCTANLLGTCLRSSSRVAASISMEGPSIWLPPPTGEFKLNTDVACRLESNMVGIGAVIRNSYGDLVVAAADCIPSKVA

Query:  ALEGEALALLF
        + E EA AL F
Subjt:  ALEGEALALLF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCCAAAGTTGGGGTGGGAGCTGTCTCGGAGCATAGACTTCGGGAGTCTATCGGCCATGGTCGAGGAAATCGATATGGAGGGAGAAGTCATAGCGATGTACGAGAT
GGGAGGAGGCGTCGCCGGAGACGGATGCTTTGACTGGAGAAGTACAGCTGGAACAGGCCTGCAAGGAAATGTAACTATTTTGGAGAGAGAGAAGACGGTGGAGGACAGAG
GAGAGAAAATCATGCCAACATGTGTAGAACAATTGCAGAAATGGGGGAAAGGCAAAGCGAAGGAGGTGGGTTCTGATATTGCAAAGAAGAGATCTTGTTTGCAAGAAGCA
TATCACCGTGGGGGAGGTCCTAATTTTGATGAAATATGTCATCTTGAGAGGAGTTTGGACCAAGCGCTTGAAAAAGAAGAAATATACTGGAAGCAACGATCATGTGACAA
TTGGTTAAAGTGGGGAGACAGAAACACAGAGTGGTTCCATAAACAAGCTTCCTCCAAGCGGGTAAAAAATACCATTCATAAAGTGCTAAATTCTGATGGAGGGTGGGCAA
TTTCTGATGAAGACTTGGAACAGTGTGGGGTGTTGGGCGTTGTGGGCTGTGGGCTGTGGGCTGACCGCAACAGTCAAGGTCGTCATCTCCCAATTGTTGAGACCTCGGTG
CGAGTGGCGTGGGTAGCCTCCTATTTCAGTGACTTTTGCACTGCCAACCTTTTGGGAACCTGTCTTCGTTCAAGTTCGAGGGTGGCGGCTTCTATTTCGATGGAAGGTCC
ATCCATCTGGCTCCCACCACCGACGGGTGAGTTTAAGCTCAATACCGATGTCGCATGCCGCCTAGAGTCTAACATGGTGGGGATTGGGGCTGTGATTAGGAATTCTTATG
GAGATTTGGTGGTAGCTGCGGCGGATTGCATCCCGAGTAAAGTTGCAGCATTGGAGGGGGAGGCTCTTGCTCTCCTCTTTGGGTTGAAGCTTGTCCAACGGATGGGCATC
TCTCTTGTTCAAGTGGAGATTGACTCCAAGGCTTTGGTCAATTTCATCAAGAAGGATACTGGAAAGGGGAGTGGTCTGTTAGCCCTCCCAGGTGGCTTTGTCCTTTATTA
TTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTCCAAAGTTGGGGTGGGAGCTGTCTCGGAGCATAGACTTCGGGAGTCTATCGGCCATGGTCGAGGAAATCGATATGGAGGGAGAAGTCATAGCGATGTACGAGAT
GGGAGGAGGCGTCGCCGGAGACGGATGCTTTGACTGGAGAAGTACAGCTGGAACAGGCCTGCAAGGAAATGTAACTATTTTGGAGAGAGAGAAGACGGTGGAGGACAGAG
GAGAGAAAATCATGCCAACATGTGTAGAACAATTGCAGAAATGGGGGAAAGGCAAAGCGAAGGAGGTGGGTTCTGATATTGCAAAGAAGAGATCTTGTTTGCAAGAAGCA
TATCACCGTGGGGGAGGTCCTAATTTTGATGAAATATGTCATCTTGAGAGGAGTTTGGACCAAGCGCTTGAAAAAGAAGAAATATACTGGAAGCAACGATCATGTGACAA
TTGGTTAAAGTGGGGAGACAGAAACACAGAGTGGTTCCATAAACAAGCTTCCTCCAAGCGGGTAAAAAATACCATTCATAAAGTGCTAAATTCTGATGGAGGGTGGGCAA
TTTCTGATGAAGACTTGGAACAGTGTGGGGTGTTGGGCGTTGTGGGCTGTGGGCTGTGGGCTGACCGCAACAGTCAAGGTCGTCATCTCCCAATTGTTGAGACCTCGGTG
CGAGTGGCGTGGGTAGCCTCCTATTTCAGTGACTTTTGCACTGCCAACCTTTTGGGAACCTGTCTTCGTTCAAGTTCGAGGGTGGCGGCTTCTATTTCGATGGAAGGTCC
ATCCATCTGGCTCCCACCACCGACGGGTGAGTTTAAGCTCAATACCGATGTCGCATGCCGCCTAGAGTCTAACATGGTGGGGATTGGGGCTGTGATTAGGAATTCTTATG
GAGATTTGGTGGTAGCTGCGGCGGATTGCATCCCGAGTAAAGTTGCAGCATTGGAGGGGGAGGCTCTTGCTCTCCTCTTTGGGTTGAAGCTTGTCCAACGGATGGGCATC
TCTCTTGTTCAAGTGGAGATTGACTCCAAGGCTTTGGTCAATTTCATCAAGAAGGATACTGGAAAGGGGAGTGGTCTGTTAGCCCTCCCAGGTGGCTTTGTCCTTTATTA
TTTTTAG
Protein sequenceShow/hide protein sequence
MIPKLGWELSRSIDFGSLSAMVEEIDMEGEVIAMYEMGGGVAGDGCFDWRSTAGTGLQGNVTILEREKTVEDRGEKIMPTCVEQLQKWGKGKAKEVGSDIAKKRSCLQEA
YHRGGGPNFDEICHLERSLDQALEKEEIYWKQRSCDNWLKWGDRNTEWFHKQASSKRVKNTIHKVLNSDGGWAISDEDLEQCGVLGVVGCGLWADRNSQGRHLPIVETSV
RVAWVASYFSDFCTANLLGTCLRSSSRVAASISMEGPSIWLPPPTGEFKLNTDVACRLESNMVGIGAVIRNSYGDLVVAAADCIPSKVAALEGEALALLFGLKLVQRMGI
SLVQVEIDSKALVNFIKKDTGKGSGLLALPGGFVLYYF