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HG10009771 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10009771
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCCHC-type domain-containing protein
Genome locationChr06:10064046..10065049
RNA-Seq ExpressionHG10009771
SyntenyHG10009771
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_021738182.1 uncharacterized protein LOC110704671 [Chenopodium quinoa]4.3e-1145.45Show/hide
Query:  RAWLFDKHLLILEEPNVDLKLSDLKFDKVTFWIRLLDLPFGFQNKTMARRIGEAIGVFLDVDCNQDGLCWGESMRIK
        R W FDK +L+L+  + D + S++  +K  FW+R+LD+PFG +N+  AR +GEA+G FL+ D  +D   W E MRIK
Subjt:  RAWLFDKHLLILEEPNVDLKLSDLKFDKVTFWIRLLDLPFGFQNKTMARRIGEAIGVFLDVDCNQDGLCWGESMRIK

XP_021770736.1 uncharacterized protein LOC110734918 [Chenopodium quinoa]1.5e-1146.75Show/hide
Query:  RAWLFDKHLLILEEPNVDLKLSDLKFDKVTFWIRLLDLPFGFQNKTMARRIGEAIGVFLDVDCNQDGLCWGESMRIK
        R W FD  +L+L+E   D + SD++F+  +FWIRL+D+PFG +NK  AR +G+ IG  L+VD + D L W + MR+K
Subjt:  RAWLFDKHLLILEEPNVDLKLSDLKFDKVTFWIRLLDLPFGFQNKTMARRIGEAIGVFLDVDCNQDGLCWGESMRIK

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]1.5e-1653.33Show/hide
Query:  WLFDKHLLILEEPNVDLKLSDLKFDKVTFWIRLLDLPFGFQNKTMARRIGEAIGVFLDVDCNQDGLCWGESMRIK
        W FDK L++L++P     +S+L+F++V FWI L DLP  + NKTMA R+G AIG F+DVDCN+ G  WG S+RI+
Subjt:  WLFDKHLLILEEPNVDLKLSDLKFDKVTFWIRLLDLPFGFQNKTMARRIGEAIGVFLDVDCNQDGLCWGESMRIK

XP_028063997.1 uncharacterized protein LOC114267184 [Camellia sinensis]3.8e-1237.74Show/hide
Query:  WLFDKHLLILEEPNVDLKLSDLKFDKVTFWIRLLDLPFGFQNKTMARRIGEAIGVFLDVDCNQDGLCWGESMRIKKEQPSVGPWLRFQGATRLPKKLSDS
        W FDKHLL+L E + ++  SD++   V FW+ + +LP    NK + + IG ++G F+D+D   DG+ WG +MRI+K   ++  W       R   KLS S
Subjt:  WLFDKHLLILEEPNVDLKLSDLKFDKVTFWIRLLDLPFGFQNKTMARRIGEAIGVFLDVDCNQDGLCWGESMRIKKEQPSVGPWLRFQGATRLPKKLSDS

Query:  PEDPIF
          DP++
Subjt:  PEDPIF

XP_035543571.1 uncharacterized protein At4g02000-like [Juglans regia]1.5e-1140.26Show/hide
Query:  WLFDKHLLILEEPNVDLKLSDLKFDKVTFWIRLLDLPFGFQNKTMARRIGEAIGVFLDVDCNQDGLCWGESMRIKKE
        WLFD HL +L++ + +++ S + FD    WI++L+LP  + NK M   IG ++G  L+VD  +DGL WG  +R++ E
Subjt:  WLFDKHLLILEEPNVDLKLSDLKFDKVTFWIRLLDLPFGFQNKTMARRIGEAIGVFLDVDCNQDGLCWGESMRIKKE

TrEMBL top hitse value%identityAlignment
A0A6J1BSZ1 uncharacterized protein LOC1110054813.5e-1141.46Show/hide
Query:  MGPQRRAWLFDKHLLILEEPNVDLKLSDLKFDKVTFWIRLLDLPFGFQNKTMARRIGEAIGVFLDVDCNQDGLCWGESMRIK
        MGP    W FD+ L+I++ P    K  D+ F  V+ W+   DL     NKTMA R+G AIG+F DV+ N +  CWG  +R++
Subjt:  MGPQRRAWLFDKHLLILEEPNVDLKLSDLKFDKVTFWIRLLDLPFGFQNKTMARRIGEAIGVFLDVDCNQDGLCWGESMRIK

A0A6J1DU55 uncharacterized protein LOC1110231357.3e-1753.33Show/hide
Query:  WLFDKHLLILEEPNVDLKLSDLKFDKVTFWIRLLDLPFGFQNKTMARRIGEAIGVFLDVDCNQDGLCWGESMRIK
        W FDK L++L++P     +S+L+F++V FWI L DLP  + NKTMA R+G AIG F+DVDCN+ G  WG S+RI+
Subjt:  WLFDKHLLILEEPNVDLKLSDLKFDKVTFWIRLLDLPFGFQNKTMARRIGEAIGVFLDVDCNQDGLCWGESMRIK

A0A6P9E8B9 uncharacterized protein At4g02000-like7.1e-1240.26Show/hide
Query:  WLFDKHLLILEEPNVDLKLSDLKFDKVTFWIRLLDLPFGFQNKTMARRIGEAIGVFLDVDCNQDGLCWGESMRIKKE
        WLFD HL +L++ + +++ S + FD    WI++L+LP  + NK M   IG ++G  L+VD  +DGL WG  +R++ E
Subjt:  WLFDKHLLILEEPNVDLKLSDLKFDKVTFWIRLLDLPFGFQNKTMARRIGEAIGVFLDVDCNQDGLCWGESMRIKKE

A0A803MN93 Uncharacterized protein2.1e-1145.45Show/hide
Query:  RAWLFDKHLLILEEPNVDLKLSDLKFDKVTFWIRLLDLPFGFQNKTMARRIGEAIGVFLDVDCNQDGLCWGESMRIK
        R W FDK +L+L+  + D + S++  +K  FW+R+LD+PFG +N+  AR +GEA+G FL+ D  +D   W E MRIK
Subjt:  RAWLFDKHLLILEEPNVDLKLSDLKFDKVTFWIRLLDLPFGFQNKTMARRIGEAIGVFLDVDCNQDGLCWGESMRIK

A0A803MW53 Uncharacterized protein1.2e-1146.75Show/hide
Query:  RAWLFDKHLLILEEPNVDLKLSDLKFDKVTFWIRLLDLPFGFQNKTMARRIGEAIGVFLDVDCNQDGLCWGESMRIK
        R W+FD  +L+L+E     + S++ FD   FWIRLLD+PFG ++  +A  IG  IG  +DVD   D LCW E MR+K
Subjt:  RAWLFDKHLLILEEPNVDLKLSDLKFDKVTFWIRLLDLPFGFQNKTMARRIGEAIGVFLDVDCNQDGLCWGESMRIK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCCTCAGCGCAGGGCATGGCTTTTTGACAAACATTTGCTAATCCTGGAAGAACCGAATGTTGACTTGAAGCTTTCAGATTTGAAATTCGACAAAGTAACATTCTG
GATCCGCTTGTTGGATCTTCCCTTTGGTTTCCAGAATAAAACAATGGCAAGGAGGATTGGGGAAGCAATTGGTGTTTTTCTTGATGTGGACTGCAATCAAGATGGTTTGT
GTTGGGGAGAGTCTATGAGAATCAAAAAGGAGCAACCCTCAGTTGGTCCTTGGCTAAGGTTTCAAGGGGCTACAAGATTACCAAAGAAATTATCCGACTCTCCTGAAGAC
CCCATCTTCCAGAATGATCTCCACTCCTCTCATCCTTCTAACCCAATTACTCCCCTTGTTGTTGAACAAGCTCCCTCAAACTCACCTGTAGTTAACCCTCCAAGTCCTCT
TGTGATTGATCTAAATAAAACTCAAGTGTCTGAGATTCAGTGTGAGAATAGATCTTTATTTGATGCCCCCTTGGTCCCTTCGCTCTCCTCCACTTTATTAAACTCTGTTC
ACCCTTCCTTGGGTTCTTTTCATCAAGATTCTAACTGCTTCACCTTTCAAATGTCTGATACCTCCCTGGAAAAACCTGTTCAAGATGAACGTATTTATATTATTCTGCCT
TGTAAAACCACTAAATCGAGGAAGAAAAAAAAACAAGTTCAATTTTTGGTTCTCCAACTCGTTACGTCTGCTTGGGTCAAGTTGGAAAAAAAACATCCTTGTGATGATGT
ACTAGATGTTCTCAGAAGAAAGAAATTGTGGGCCTCCTCTCTAGAACAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTCCTCAGCGCAGGGCATGGCTTTTTGACAAACATTTGCTAATCCTGGAAGAACCGAATGTTGACTTGAAGCTTTCAGATTTGAAATTCGACAAAGTAACATTCTG
GATCCGCTTGTTGGATCTTCCCTTTGGTTTCCAGAATAAAACAATGGCAAGGAGGATTGGGGAAGCAATTGGTGTTTTTCTTGATGTGGACTGCAATCAAGATGGTTTGT
GTTGGGGAGAGTCTATGAGAATCAAAAAGGAGCAACCCTCAGTTGGTCCTTGGCTAAGGTTTCAAGGGGCTACAAGATTACCAAAGAAATTATCCGACTCTCCTGAAGAC
CCCATCTTCCAGAATGATCTCCACTCCTCTCATCCTTCTAACCCAATTACTCCCCTTGTTGTTGAACAAGCTCCCTCAAACTCACCTGTAGTTAACCCTCCAAGTCCTCT
TGTGATTGATCTAAATAAAACTCAAGTGTCTGAGATTCAGTGTGAGAATAGATCTTTATTTGATGCCCCCTTGGTCCCTTCGCTCTCCTCCACTTTATTAAACTCTGTTC
ACCCTTCCTTGGGTTCTTTTCATCAAGATTCTAACTGCTTCACCTTTCAAATGTCTGATACCTCCCTGGAAAAACCTGTTCAAGATGAACGTATTTATATTATTCTGCCT
TGTAAAACCACTAAATCGAGGAAGAAAAAAAAACAAGTTCAATTTTTGGTTCTCCAACTCGTTACGTCTGCTTGGGTCAAGTTGGAAAAAAAACATCCTTGTGATGATGT
ACTAGATGTTCTCAGAAGAAAGAAATTGTGGGCCTCCTCTCTAGAACAATGA
Protein sequenceShow/hide protein sequence
MGPQRRAWLFDKHLLILEEPNVDLKLSDLKFDKVTFWIRLLDLPFGFQNKTMARRIGEAIGVFLDVDCNQDGLCWGESMRIKKEQPSVGPWLRFQGATRLPKKLSDSPED
PIFQNDLHSSHPSNPITPLVVEQAPSNSPVVNPPSPLVIDLNKTQVSEIQCENRSLFDAPLVPSLSSTLLNSVHPSLGSFHQDSNCFTFQMSDTSLEKPVQDERIYIILP
CKTTKSRKKKKQVQFLVLQLVTSAWVKLEKKHPCDDVLDVLRRKKLWASSLEQ