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HG10009786 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10009786
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionRetrotransposon protein, putative, Ty1-copia subclass
Genome locationChr06:10380390..10380692
RNA-Seq ExpressionHG10009786
SyntenyHG10009786
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A5A7VFQ6 Retrotransposon protein, putative, Ty1-copia subclass9.9e-0476.67Show/hide
Query:  HQMNTMVATSDLNMDSCWYLDSGATSHLTH
        HQM+ MVAT DLN+DS WY DSGAT+HLTH
Subjt:  HQMNTMVATSDLNMDSCWYLDSGATSHLTH
A0A5D3D5W5 Retrotransposon protein, putative, Ty1-copia subclass5.8e-0476.67Show/hide
Query:  HQMNTMVATSDLNMDSCWYLDSGATSHLTH
        HQM+ MVAT DLN+DS WY DSGAT+HLTH
Subjt:  HQMNTMVATSDLNMDSCWYLDSGATSHLTH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGCGATCAAATTGTGGAGTACGAGGCAATAGTGATTCCTGGAACAATCGAAATAAACATCAGTGTCAAATATGTACCAAGTTTGGGCATCCCGCATGAAGATGC
TTCTTTCATTATGCTCCATGGACTAACCTCCTGGTCAAGGTTCTTCCCAAACAATTTTAATTTTGTTCCTAATGGTTCTCCCTTTCATCAGATGAACACAATGGTAGCTA
CTTCTGACCTGAATATGGATAGTTGTTGGTATCTAGATTCGGGTGCAACAAGTCACCTCACTCACAAGTCACAATATCACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGCGATCAAATTGTGGAGTACGAGGCAATAGTGATTCCTGGAACAATCGAAATAAACATCAGTGTCAAATATGTACCAAGTTTGGGCATCCCGCATGAAGATGC
TTCTTTCATTATGCTCCATGGACTAACCTCCTGGTCAAGGTTCTTCCCAAACAATTTTAATTTTGTTCCTAATGGTTCTCCCTTTCATCAGATGAACACAATGGTAGCTA
CTTCTGACCTGAATATGGATAGTTGTTGGTATCTAGATTCGGGTGCAACAAGTCACCTCACTCACAAGTCACAATATCACTAA
Protein sequenceShow/hide protein sequence
MEGDQIVEYEAIVIPGTIEINISVKYVPSLGIPHEDASFIMLHGLTSWSRFFPNNFNFVPNGSPFHQMNTMVATSDLNMDSCWYLDSGATSHLTHKSQYH