CuGenDBv2

Gene ID	HG10009803
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Ty3-gypsy retrotransposon protein
Genome location	Chr06:10757117..10757428
RNA-Seq Expression	HG10009803
Synteny	HG10009803
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6579038.1 hypothetical protein SDJN03_23486, partial [Cucurbita argyrosperma subsp. sororia]

2.5e-33

91.76

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Query:  MDNYSEGARLNIENLAFENPMPPEVLDRVRVESTSILSGTLADGVDNFASAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSR
        MDNYSEGARLN EN  FENP PPEVLDRVRVESTSILSGTLA GVDNFA AGVAVTKVKNEMFDDF+EDLDHVLLIERLRMLLSR
Subjt:  MDNYSEGARLNIENLAFENPMPPEVLDRVRVESTSILSGTLADGVDNFASAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSR

KAG7016560.1 hypothetical protein SDJN02_21670 [Cucurbita argyrosperma subsp. argyrosperma]

2.5e-33

91.76

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Query:  MDNYSEGARLNIENLAFENPMPPEVLDRVRVESTSILSGTLADGVDNFASAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSR
        MDNYSEGARLN EN  FENP PPEVLDRVRVESTSILSGTLA GVDNFA AGVAVTKVKNEMFDDF+EDLDHVLLIERLRMLLSR
Subjt:  MDNYSEGARLNIENLAFENPMPPEVLDRVRVESTSILSGTLADGVDNFASAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSR

XP_022939493.1 uncharacterized protein LOC111445382 isoform X1 [Cucurbita moschata]

1.9e-33

91.76

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Query:  MDNYSEGARLNIENLAFENPMPPEVLDRVRVESTSILSGTLADGVDNFASAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSR
        MDNYSEGARLN EN  FENP PPEVLDRVRVESTSILSGTL  GVDNFA AGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSR
Subjt:  MDNYSEGARLNIENLAFENPMPPEVLDRVRVESTSILSGTLADGVDNFASAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSR

XP_022939495.1 uncharacterized protein LOC111445382 isoform X2 [Cucurbita moschata]

1.9e-33

91.76

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Query:  MDNYSEGARLNIENLAFENPMPPEVLDRVRVESTSILSGTLADGVDNFASAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSR
        MDNYSEGARLN EN  FENP PPEVLDRVRVESTSILSGTL  GVDNFA AGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSR
Subjt:  MDNYSEGARLNIENLAFENPMPPEVLDRVRVESTSILSGTLADGVDNFASAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSR

XP_022939497.1 uncharacterized protein LOC111445382 isoform X3 [Cucurbita moschata]

1.9e-33

91.76

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Query:  MDNYSEGARLNIENLAFENPMPPEVLDRVRVESTSILSGTLADGVDNFASAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSR
        MDNYSEGARLN EN  FENP PPEVLDRVRVESTSILSGTL  GVDNFA AGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSR
Subjt:  MDNYSEGARLNIENLAFENPMPPEVLDRVRVESTSILSGTLADGVDNFASAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSR

TrEMBL top hits

e value

%identity

Alignment

A0A6J1FGY5 uncharacterized protein LOC111445382 isoform X3

9.4e-34

91.76

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Query:  MDNYSEGARLNIENLAFENPMPPEVLDRVRVESTSILSGTLADGVDNFASAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSR
        MDNYSEGARLN EN  FENP PPEVLDRVRVESTSILSGTL  GVDNFA AGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSR
Subjt:  MDNYSEGARLNIENLAFENPMPPEVLDRVRVESTSILSGTLADGVDNFASAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSR

A0A6J1FLT1 uncharacterized protein LOC111445382 isoform X1

9.4e-34

91.76

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Query:  MDNYSEGARLNIENLAFENPMPPEVLDRVRVESTSILSGTLADGVDNFASAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSR
        MDNYSEGARLN EN  FENP PPEVLDRVRVESTSILSGTL  GVDNFA AGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSR
Subjt:  MDNYSEGARLNIENLAFENPMPPEVLDRVRVESTSILSGTLADGVDNFASAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSR

A0A6J1FMV3 uncharacterized protein LOC111445382 isoform X2

9.4e-34

91.76

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Query:  MDNYSEGARLNIENLAFENPMPPEVLDRVRVESTSILSGTLADGVDNFASAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSR
        MDNYSEGARLN EN  FENP PPEVLDRVRVESTSILSGTL  GVDNFA AGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSR
Subjt:  MDNYSEGARLNIENLAFENPMPPEVLDRVRVESTSILSGTLADGVDNFASAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSR

A0A6J1JS72 uncharacterized protein LOC111489311 isoform X3

3.6e-33

91.76

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Query:  MDNYSEGARLNIENLAFENPMPPEVLDRVRVESTSILSGTLADGVDNFASAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSR
        MDNYSEGARLN EN  FENP PPEVLDRVRVESTSILSGTLA  VDNFA AGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSR
Subjt:  MDNYSEGARLNIENLAFENPMPPEVLDRVRVESTSILSGTLADGVDNFASAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSR

A0A6J1JZL8 uncharacterized protein LOC111489311 isoform X1

3.6e-33

91.76

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Query:  MDNYSEGARLNIENLAFENPMPPEVLDRVRVESTSILSGTLADGVDNFASAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSR
        MDNYSEGARLN EN  FENP PPEVLDRVRVESTSILSGTLA  VDNFA AGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSR
Subjt:  MDNYSEGARLNIENLAFENPMPPEVLDRVRVESTSILSGTLADGVDNFASAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSR

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGACAACTACAGTGAGGGGGCTCGATTAAATATAGAGAACCTGGCTTTTGAGAATCCAATGCCACCTGAGGTTCTTGATCGGGTAAGGGTGGAATCCACAAGC
ATCTTATCAGGTACCTTGGCAGATGGTGTAGATAACTTTGCTTCTGCTGGTGTGGCTGTAACTAAGGTTAAAAATGAGATGTTTGATGACTTCGATGAAGATCTT
GATCATGTTTTATTGATAGAGCGACTAAGGATGCTGCTTTCAAGGTTCCACATTTTCTTGGTGATCATATTTTCTCTATCTGTAGTTATCTGTTTCTATTGA

mRNA sequence

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Protein sequence

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MDNYSEGARLNIENLAFENPMPPEVLDRVRVESTSILSGTLADGVDNFASAGVAVTKVKNEMFDDFDEDLDHVLLIERLRMLLSRFHIFLVIIFSLSVVICFY

HG10009803 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome