CuGenDBv2

Gene ID	HG10009813
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	CDK-activating kinase assembly factor MAT1
Genome location	Chr06:11014467..11017246
RNA-Seq Expression	HG10009813
Synteny	HG10009813
Gene Ontology terms	GO:0000079 - regulation of cyclin-dependent protein serine/threonine kinase activity (biological process) GO:0006281 - DNA repair (biological process) GO:0006357 - regulation of transcription by RNA polymerase II (biological process) GO:0005675 - transcription factor TFIIH holo complex (cellular component) GO:0016301 - kinase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8653060.1 hypothetical protein Csa_019757 [Cucumis sativus]

9.6e-08

71.43

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Query:  FNLIEGISVQAIQEKVARYQEENAEQNMINRARKGTGVLPMVYIVTERL
        FNLIEGI VQAI+ K+ARYQEENAEQ MINRARK  GVL  VY ++  L
Subjt:  FNLIEGISVQAIQEKVARYQEENAEQNMINRARKGTGVLPMVYIVTERL

PON70423.1 Cdk-activating kinase assembly factor [Parasponia andersonii]

3.1e-06

74.36

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Query:  DYITAFNLIEGISVQAIQEKVARYQEENAEQNMINRARK
        D++ AFN IEGI V AI+EK+A+YQEENAEQ MINRARK
Subjt:  DYITAFNLIEGISVQAIQEKVARYQEENAEQNMINRARK

PON99337.1 Cdk-activating kinase assembly factor [Trema orientale]

2.4e-06

74.36

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Query:  DYITAFNLIEGISVQAIQEKVARYQEENAEQNMINRARK
        D++ AFNLIEGI V AI+EK+A+YQEEN+EQ MINRARK
Subjt:  DYITAFNLIEGISVQAIQEKVARYQEENAEQNMINRARK

QCD93839.1 CDK-activating kinase assembly factor MAT1 [Vigna unguiculata]

5.3e-06

76.92

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Query:  DYITAFNLIEGISVQAIQEKVARYQEENAEQNMINRARK
        D + AFNLIEGI V AI+EK+A+YQEENAEQ MINRARK
Subjt:  DYITAFNLIEGISVQAIQEKVARYQEENAEQNMINRARK

XP_040997924.1 uncharacterized protein LOC121243927 isoform X2 [Juglans microcarpa x Juglans regia]

1.5e-05

78.38

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Query:  ITAFNLIEGISVQAIQEKVARYQEENAEQNMINRARK
        ++AFNLIEG  V AI+EK+ARYQEENAEQ MINRARK
Subjt:  ITAFNLIEGISVQAIQEKVARYQEENAEQNMINRARK

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B9R4 uncharacterized protein LOC103487330

1.7e-05

85.29

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Query:  FNLIEGISVQAIQEKVARYQEENAEQNMINRARK
        FNLIEGI VQAI+ K+ARYQEENAEQ MINRARK
Subjt:  FNLIEGISVQAIQEKVARYQEENAEQNMINRARK

A0A2I4EW70 uncharacterized protein LOC108993247 isoform X2

7.4e-06

78.38

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Query:  ITAFNLIEGISVQAIQEKVARYQEENAEQNMINRARK
        ++AFNLIEG  V AI+EK+ARYQEENAEQ MINRARK
Subjt:  ITAFNLIEGISVQAIQEKVARYQEENAEQNMINRARK

A0A2P5DAW1 Cdk-activating kinase assembly factor

1.5e-06

74.36

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Query:  DYITAFNLIEGISVQAIQEKVARYQEENAEQNMINRARK
        D++ AFN IEGI V AI+EK+A+YQEENAEQ MINRARK
Subjt:  DYITAFNLIEGISVQAIQEKVARYQEENAEQNMINRARK

A0A2P5FNE0 Cdk-activating kinase assembly factor

1.1e-06

74.36

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Query:  DYITAFNLIEGISVQAIQEKVARYQEENAEQNMINRARK
        D++ AFNLIEGI V AI+EK+A+YQEEN+EQ MINRARK
Subjt:  DYITAFNLIEGISVQAIQEKVARYQEENAEQNMINRARK

A0A4D6LXW0 CDK-activating kinase assembly factor MAT1

2.6e-06

76.92

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Query:  DYITAFNLIEGISVQAIQEKVARYQEENAEQNMINRARK
        D + AFNLIEGI V AI+EK+A+YQEENAEQ MINRARK
Subjt:  DYITAFNLIEGISVQAIQEKVARYQEENAEQNMINRARK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G30820.1 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-related

8.7e-07

67.65

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Query:  FNLIEGISVQAIQEKVARYQEENAEQNMINRARK
        F+LI+GI+V+AI++K+ RY +ENAEQ MINRARK
Subjt:  FNLIEGISVQAIQEKVARYQEENAEQNMINRARK

AT4G30820.2 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-related

8.7e-07

67.65

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Query:  FNLIEGISVQAIQEKVARYQEENAEQNMINRARK
        F+LI+GI+V+AI++K+ RY +ENAEQ MINRARK
Subjt:  FNLIEGISVQAIQEKVARYQEENAEQNMINRARK

AT4G30820.3 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-related

8.7e-07

67.65

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Query:  FNLIEGISVQAIQEKVARYQEENAEQNMINRARK
        F+LI+GI+V+AI++K+ RY +ENAEQ MINRARK
Subjt:  FNLIEGISVQAIQEKVARYQEENAEQNMINRARK

Sequences

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CDS sequence

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ATGTCATTTGAGGACTTGGGATGCTATAACATGACAAATAGAGACTACATCACAGCTTTTAACTTGATTGAAGGCATTAGTGTTCAAGCTATTCAAGAAAAAGTTGCTAG
GTATCAAGAAGAAAATGCTGAGCAAAACATGATCAACCGTGCTCGCAAGGGTACCGGTGTATTACCTATGGTTTACATAGTCACTGAAAGGTTAATGACACTTGTTAAAC
TATTTGATAGGCTGAGAATATGTTGCAGTCCTTGCAACAAGCAATGGAAAAAATGTTAA

mRNA sequence

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Protein sequence

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MSFEDLGCYNMTNRDYITAFNLIEGISVQAIQEKVARYQEENAEQNMINRARKGTGVLPMVYIVTERLMTLVKLFDRLRICCSPCNKQWKKC

HG10009813 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome