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HG10009852 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10009852
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionzinc finger CCCH domain-containing protein 15 homolog
Genome locationChr06:11958967..11961104
RNA-Seq ExpressionHG10009852
SyntenyHG10009852
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0005829 - cytosol (cellular component)
InterPro domainsIPR032378 - ZC3H15/TMA46 family, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008460490.1 PREDICTED: zinc finger CCCH domain-containing protein 15 homolog isoform X2 [Cucumis melo]9.1e-3189.87Show/hide
Query:  MGAEEGAMEQEKLASHNPRTVPITEAQFLSWKRQKDAEASAKRDESARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
        MG EE AMEQEKL+ +NPRTVPITEAQFLSWKRQKDAEASAKRDE+ARKRAEDIA GAVQMNGRELFLHQPWVFDN+QY
Subjt:  MGAEEGAMEQEKLASHNPRTVPITEAQFLSWKRQKDAEASAKRDESARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
XP_022141384.1 zinc finger CCCH domain-containing protein 15 homolog [Momordica charantia]9.1e-3190.12Show/hide
Query:  MGAEE--GAMEQEKLASHNPRTVPITEAQFLSWKRQKDAEASAKRDESARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
        MGAEE   AME+EKL SHNPRT PITEAQFLSWKRQKDAEASAKRDE+ARKRAEDIA+GAVQMNGRELFLHQPWVFDNTQY
Subjt:  MGAEE--GAMEQEKLASHNPRTVPITEAQFLSWKRQKDAEASAKRDESARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
XP_022939418.1 zinc finger CCCH domain-containing protein 15 homolog [Cucurbita moschata]4.8e-3291.14Show/hide
Query:  MGAEEGAMEQEKLASHNPRTVPITEAQFLSWKRQKDAEASAKRDESARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
        MGAEE AMEQEKLAS NPRT+PITE QFLSWKRQKDAEASAKRDE+ARKRA+DIASGAVQMNGRELFLHQPWVFDN+QY
Subjt:  MGAEEGAMEQEKLASHNPRTVPITEAQFLSWKRQKDAEASAKRDESARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
XP_022992866.1 zinc finger CCCH domain-containing protein 15 homolog [Cucurbita maxima]5.3e-3189.87Show/hide
Query:  MGAEEGAMEQEKLASHNPRTVPITEAQFLSWKRQKDAEASAKRDESARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
        M AEE AMEQEKLAS NPRT+PITE QFLSWKRQKDAEASAKRDE+ARKRA+DIASGAVQMNGRELFLHQPWVFDN+QY
Subjt:  MGAEEGAMEQEKLASHNPRTVPITEAQFLSWKRQKDAEASAKRDESARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
XP_038906768.1 zinc finger CCCH domain-containing protein 15 homolog [Benincasa hispida]6.3e-3294.94Show/hide
Query:  MGAEEGAMEQEKLASHNPRTVPITEAQFLSWKRQKDAEASAKRDESARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
        MGA EGA EQEK ASHNPRTVPITEAQFLSWKRQKDAEASAKRDE+ARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
Subjt:  MGAEEGAMEQEKLASHNPRTVPITEAQFLSWKRQKDAEASAKRDESARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
TrEMBL top hitse value%identityAlignment
A0A1S3CCP9 zinc finger CCCH domain-containing protein 15 homolog isoform X24.4e-3189.87Show/hide
Query:  MGAEEGAMEQEKLASHNPRTVPITEAQFLSWKRQKDAEASAKRDESARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
        MG EE AMEQEKL+ +NPRTVPITEAQFLSWKRQKDAEASAKRDE+ARKRAEDIA GAVQMNGRELFLHQPWVFDN+QY
Subjt:  MGAEEGAMEQEKLASHNPRTVPITEAQFLSWKRQKDAEASAKRDESARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
A0A6J1CIH3 zinc finger CCCH domain-containing protein 15 homolog4.4e-3190.12Show/hide
Query:  MGAEE--GAMEQEKLASHNPRTVPITEAQFLSWKRQKDAEASAKRDESARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
        MGAEE   AME+EKL SHNPRT PITEAQFLSWKRQKDAEASAKRDE+ARKRAEDIA+GAVQMNGRELFLHQPWVFDNTQY
Subjt:  MGAEE--GAMEQEKLASHNPRTVPITEAQFLSWKRQKDAEASAKRDESARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
A0A6J1FLL2 zinc finger CCCH domain-containing protein 15 homolog2.3e-3291.14Show/hide
Query:  MGAEEGAMEQEKLASHNPRTVPITEAQFLSWKRQKDAEASAKRDESARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
        MGAEE AMEQEKLAS NPRT+PITE QFLSWKRQKDAEASAKRDE+ARKRA+DIASGAVQMNGRELFLHQPWVFDN+QY
Subjt:  MGAEEGAMEQEKLASHNPRTVPITEAQFLSWKRQKDAEASAKRDESARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
A0A6J1JSG7 zinc finger CCCH domain-containing protein 15 homolog5.7e-3189.87Show/hide
Query:  MGAEEGAMEQEKLASHNPRTVPITEAQFLSWKRQKDAEASAKRDESARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
        MGAEE A+EQEKLASH+P   PITEAQFLSWKR KDAEASAKRDE+ARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
Subjt:  MGAEEGAMEQEKLASHNPRTVPITEAQFLSWKRQKDAEASAKRDESARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
A0A6J1JUQ1 zinc finger CCCH domain-containing protein 15 homolog2.6e-3189.87Show/hide
Query:  MGAEEGAMEQEKLASHNPRTVPITEAQFLSWKRQKDAEASAKRDESARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
        M AEE AMEQEKLAS NPRT+PITE QFLSWKRQKDAEASAKRDE+ARKRA+DIASGAVQMNGRELFLHQPWVFDN+QY
Subjt:  MGAEEGAMEQEKLASHNPRTVPITEAQFLSWKRQKDAEASAKRDESARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G22140.1 unknown protein2.5e-1867.74Show/hide
Query:  PRTVPITEAQFLSWKRQKDAEASAKRDESARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
        P  + I++ QFL+WKRQKDAE  AK+ E+ARKR EDIASG V MNGRELFLH+PWVFD+T +
Subjt:  PRTVPITEAQFLSWKRQKDAEASAKRDESARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY
AT1G22140.2 unknown protein4.4e-0765Show/hide
Query:  PRTVPITEAQFLSWKRQKDAEASAKRDESARKRAEDIASG
        P  + I++ QFL+WKRQKDAE  AK+ E+ARKR EDIASG
Subjt:  PRTVPITEAQFLSWKRQKDAEASAKRDESARKRAEDIASG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCAGAAGAAGGAGCTATGGAACAAGAGAAGCTCGCATCTCATAATCCAAGGACGGTTCCCATCACGGAGGCTCAGTTCCTATCCTGGAAGCGGCAGAAGGATGC
TGAGGCATCTGCTAAAAGAGATGAATCCGCAAGGAAACGTGCGGAGGATATAGCCTCAGGAGCGGTGCAAATGAACGGGCGAGAGCTTTTCTTGCACCAACCATGGGTTT
TTGATAATACTCAATATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGCAGAAGAAGGAGCTATGGAACAAGAGAAGCTCGCATCTCATAATCCAAGGACGGTTCCCATCACGGAGGCTCAGTTCCTATCCTGGAAGCGGCAGAAGGATGC
TGAGGCATCTGCTAAAAGAGATGAATCCGCAAGGAAACGTGCGGAGGATATAGCCTCAGGAGCGGTGCAAATGAACGGGCGAGAGCTTTTCTTGCACCAACCATGGGTTT
TTGATAATACTCAATATTGA
Protein sequenceShow/hide protein sequence
MGAEEGAMEQEKLASHNPRTVPITEAQFLSWKRQKDAEASAKRDESARKRAEDIASGAVQMNGRELFLHQPWVFDNTQY