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HG10009861 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10009861
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionTransposase
Genome locationChr06:12157913..12159234
RNA-Seq ExpressionHG10009861
SyntenyHG10009861
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034844.1 putative serine/threonine-protein kinase nek2 [Cucumis melo var. makuwa]4.5e-0451.61Show/hide
Query:  IIKNTDRVANKDP---SPNDVLTQALGTPEQGRREKVLRKIAKEKEVVST---PIAHEAKEK
        II   D + +K P   SPND LTQALGTPE G REKVL  + KEK+ ++T   PI+  +K+K
Subjt:  IIKNTDRVANKDP---SPNDVLTQALGTPEQGRREKVLRKIAKEKEVVST---PIAHEAKEK
KAA0055817.1 transposase [Cucumis melo var. makuwa]7.7e-0452.46Show/hide
Query:  DEIIKNTDRVANKDPSPNDVLTQALGTPEQGRREKVLRKIAKEKEVVST---PIAHEAKEK
        DEI+   D+  N++ SPND LTQALGTPE GRREK+L  I KEK+ ++T   P++  +K+K
Subjt:  DEIIKNTDRVANKDPSPNDVLTQALGTPEQGRREKVLRKIAKEKEVVST---PIAHEAKEK
TrEMBL top hitse value%identityAlignment
A0A5A7SUC4 Putative serine/threonine-protein kinase nek22.2e-0451.61Show/hide
Query:  IIKNTDRVANKDP---SPNDVLTQALGTPEQGRREKVLRKIAKEKEVVST---PIAHEAKEK
        II   D + +K P   SPND LTQALGTPE G REKVL  + KEK+ ++T   PI+  +K+K
Subjt:  IIKNTDRVANKDP---SPNDVLTQALGTPEQGRREKVLRKIAKEKEVVST---PIAHEAKEK
A0A5A7UBQ4 Uncharacterized protein6.4e-0447.62Show/hide
Query:  IGDEIIKNTDRVANKDPSPNDVLTQALGTPEQGRREKVLRKIAKEKEVVST---PIAHEAKEK
        + +EI +  D+  N++ SPND LTQALGTPE G REKVL  + KEK+ ++T   P++  +K+K
Subjt:  IGDEIIKNTDRVANKDPSPNDVLTQALGTPEQGRREKVLRKIAKEKEVVST---PIAHEAKEK
A0A5A7UMJ5 Transposase3.7e-0452.46Show/hide
Query:  DEIIKNTDRVANKDPSPNDVLTQALGTPEQGRREKVLRKIAKEKEVVST---PIAHEAKEK
        DEI+   D+  N++ SPND LTQALGTPE GRREK+L  I KEK+ ++T   P++  +K+K
Subjt:  DEIIKNTDRVANKDPSPNDVLTQALGTPEQGRREKVLRKIAKEKEVVST---PIAHEAKEK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCTAGGAAGTGATGAGGACTTGGAGCTTCGTCTGGATGATGTTACAATTGGTGATGAGATTATAAAGAATACAGATCGAGTTGCCAACAAAGATCCTTCACCCAA
TGATGTTTTGACTCAAGCTTTGGGTACTCCAGAGCAAGGTAGACGGGAGAAAGTTCTAAGGAAGATCGCAAAGGAGAAAGAAGTTGTTAGTACACCAATAGCACATGAGG
CAAAGGAGAAGGAAGCTATTATGTACCGCCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGCTAGGAAGTGATGAGGACTTGGAGCTTCGTCTGGATGATGTTACAATTGGTGATGAGATTATAAAGAATACAGATCGAGTTGCCAACAAAGATCCTTCACCCAA
TGATGTTTTGACTCAAGCTTTGGGTACTCCAGAGCAAGGTAGACGGGAGAAAGTTCTAAGGAAGATCGCAAAGGAGAAAGAAGTTGTTAGTACACCAATAGCACATGAGG
CAAAGGAGAAGGAAGCTATTATGTACCGCCAATAG
Protein sequenceShow/hide protein sequence
MELGSDEDLELRLDDVTIGDEIIKNTDRVANKDPSPNDVLTQALGTPEQGRREKVLRKIAKEKEVVSTPIAHEAKEKEAIMYRQ