; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10009875 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10009875
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationChr06:12507930..12508758
RNA-Seq ExpressionHG10009875
SyntenyHG10009875
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067379.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]7.9e-11876.81Show/hide
Query:  MHHYIVENELPLTVVLQTSLVDMYAKCGAIHEALAVFRACSLQQADVLIWNAIIGGLATHGLIKESVDLFFEMQIVGIVPDEITYLCLLSCCAHGGLVEE
        MH YIVENELPLT+VLQTSLVDMYAKCGAIHEAL VFRACSLQ+ADVLIWNAIIGGLATHGLIKES+DLF +MQ+VGIVPDEITYLCLLSCCAHGGLVEE
Subjt:  MHHYIVENELPLTVVLQTSLVDMYAKCGAIHEALAVFRACSLQQADVLIWNAIIGGLATHGLIKESVDLFFEMQIVGIVPDEITYLCLLSCCAHGGLVEE

Query:  AWYFFDCLHKHGMIPKVEHYACMVDVLSRAGQ----------------------------------IGKVVGRRLVELDPNHDGIYVGLSNIYAADKHWD
        AWYFFDCL KHGM PKVEHYACMVDVLSRAGQ                                  I KVVGRRLVELDPNHDG YVGLSNIYAADK WD
Subjt:  AWYFFDCLHKHGMIPKVEHYACMVDVLSRAGQ----------------------------------IGKVVGRRLVELDPNHDGIYVGLSNIYAADKHWD

Query:  AARNIRESMGRRGVKKSPGFSFVEVFGILHRFIAHDKTHGDSEQIYMMLNVIIDQMKPIEDYVYQEYCFYDIINVS
         A+N+RE+M R+G+KKSPGFSF+EV+GILHRF+AHDKTHGDS+QI+MMLN I+DQMKPIEDYV+QE CFYDIIN+S
Subjt:  AARNIRESMGRRGVKKSPGFSFVEVFGILHRFIAHDKTHGDSEQIYMMLNVIIDQMKPIEDYVYQEYCFYDIINVS

KAE8648407.1 hypothetical protein Csa_008422 [Cucumis sativus]2.3e-11776.45Show/hide
Query:  MHHYIVENELPLTVVLQTSLVDMYAKCGAIHEALAVFRACSLQQADVLIWNAIIGGLATHGLIKESVDLFFEMQIVGIVPDEITYLCLLSCCAHGGLVEE
        MH YIVENELPLT+VLQTSLVDMYAKCGAIHEAL VFRACSLQ+ADVLIWNAIIGGLATHGLIKE+++LF EM++VGIVPDEITYLCLLSCCAHGGLVEE
Subjt:  MHHYIVENELPLTVVLQTSLVDMYAKCGAIHEALAVFRACSLQQADVLIWNAIIGGLATHGLIKESVDLFFEMQIVGIVPDEITYLCLLSCCAHGGLVEE

Query:  AWYFFDCLHKHGMIPKVEHYACMVDVLSRAGQ----------------------------------IGKVVGRRLVELDPNHDGIYVGLSNIYAADKHWD
        AWYFFDCL KHGMIPKVEHYACMVD LSRAGQ                                  I KVVGRRLVELDPNHDG YVGLSNIYAADK WD
Subjt:  AWYFFDCLHKHGMIPKVEHYACMVDVLSRAGQ----------------------------------IGKVVGRRLVELDPNHDGIYVGLSNIYAADKHWD

Query:  AARNIRESMGRRGVKKSPGFSFVEVFGILHRFIAHDKTHGDSEQIYMMLNVIIDQMKPIEDYVYQEYCFYDIINVS
         A+NIRE+M R+GVKKSPGFSF+EV+G+LHRF+AHDKTHGD EQI+MMLN+I+DQMKPIEDYV+QE CFYDI+NVS
Subjt:  AARNIRESMGRRGVKKSPGFSFVEVFGILHRFIAHDKTHGDSEQIYMMLNVIIDQMKPIEDYVYQEYCFYDIINVS

XP_008460457.1 PREDICTED: pentatricopeptide repeat-containing protein At5g08305 [Cucumis melo]7.9e-11876.81Show/hide
Query:  MHHYIVENELPLTVVLQTSLVDMYAKCGAIHEALAVFRACSLQQADVLIWNAIIGGLATHGLIKESVDLFFEMQIVGIVPDEITYLCLLSCCAHGGLVEE
        MH YIVENELPLT+VLQTSLVDMYAKCGAIHEAL VFRACSLQ+ADVLIWNAIIGGLATHGLIKES+DLF +MQ+VGIVPDEITYLCLLSCCAHGGLVEE
Subjt:  MHHYIVENELPLTVVLQTSLVDMYAKCGAIHEALAVFRACSLQQADVLIWNAIIGGLATHGLIKESVDLFFEMQIVGIVPDEITYLCLLSCCAHGGLVEE

Query:  AWYFFDCLHKHGMIPKVEHYACMVDVLSRAGQ----------------------------------IGKVVGRRLVELDPNHDGIYVGLSNIYAADKHWD
        AWYFFDCL KHGM PKVEHYACMVDVLSRAGQ                                  I KVVGRRLVELDPNHDG YVGLSNIYAADK WD
Subjt:  AWYFFDCLHKHGMIPKVEHYACMVDVLSRAGQ----------------------------------IGKVVGRRLVELDPNHDGIYVGLSNIYAADKHWD

Query:  AARNIRESMGRRGVKKSPGFSFVEVFGILHRFIAHDKTHGDSEQIYMMLNVIIDQMKPIEDYVYQEYCFYDIINVS
         A+N+RE+M R+G+KKSPGFSF+EV+GILHRF+AHDKTHGDS+QI+MMLN I+DQMKPIEDYV+QE CFYDIIN+S
Subjt:  AARNIRESMGRRGVKKSPGFSFVEVFGILHRFIAHDKTHGDSEQIYMMLNVIIDQMKPIEDYVYQEYCFYDIINVS

XP_011655189.1 pentatricopeptide repeat-containing protein At5g08305 [Cucumis sativus]2.3e-11776.45Show/hide
Query:  MHHYIVENELPLTVVLQTSLVDMYAKCGAIHEALAVFRACSLQQADVLIWNAIIGGLATHGLIKESVDLFFEMQIVGIVPDEITYLCLLSCCAHGGLVEE
        MH YIVENELPLT+VLQTSLVDMYAKCGAIHEAL VFRACSLQ+ADVLIWNAIIGGLATHGLIKE+++LF EM++VGIVPDEITYLCLLSCCAHGGLVEE
Subjt:  MHHYIVENELPLTVVLQTSLVDMYAKCGAIHEALAVFRACSLQQADVLIWNAIIGGLATHGLIKESVDLFFEMQIVGIVPDEITYLCLLSCCAHGGLVEE

Query:  AWYFFDCLHKHGMIPKVEHYACMVDVLSRAGQ----------------------------------IGKVVGRRLVELDPNHDGIYVGLSNIYAADKHWD
        AWYFFDCL KHGMIPKVEHYACMVD LSRAGQ                                  I KVVGRRLVELDPNHDG YVGLSNIYAADK WD
Subjt:  AWYFFDCLHKHGMIPKVEHYACMVDVLSRAGQ----------------------------------IGKVVGRRLVELDPNHDGIYVGLSNIYAADKHWD

Query:  AARNIRESMGRRGVKKSPGFSFVEVFGILHRFIAHDKTHGDSEQIYMMLNVIIDQMKPIEDYVYQEYCFYDIINVS
         A+NIRE+M R+GVKKSPGFSF+EV+G+LHRF+AHDKTHGD EQI+MMLN+I+DQMKPIEDYV+QE CFYDI+NVS
Subjt:  AARNIRESMGRRGVKKSPGFSFVEVFGILHRFIAHDKTHGDSEQIYMMLNVIIDQMKPIEDYVYQEYCFYDIINVS

XP_038874278.1 pentatricopeptide repeat-containing protein At5g08305 isoform X1 [Benincasa hispida]9.9e-12180.07Show/hide
Query:  MHHYIVENELPLTVVLQTSLVDMYAKCGAIHEALAVFRACSLQQADVLIWNAIIGGLATHGLIKESVDLFFEMQIVGIVPDEITYLCLLSCCAHGGLVEE
        MHHYIVENELPLT+VLQTSLVDMYAKCGAIHEAL VFRACS QQADVLIWNAIIGGLATHGLIKESVDLFFEMQ+VGIVPDEITYLCLLSCCAHGGLVEE
Subjt:  MHHYIVENELPLTVVLQTSLVDMYAKCGAIHEALAVFRACSLQQADVLIWNAIIGGLATHGLIKESVDLFFEMQIVGIVPDEITYLCLLSCCAHGGLVEE

Query:  AWYFFDCLHKHGMIPKVEHYACMVDVLSRAGQI----------------------------------GKVVGRRLVELDPNHDGIYVGLSNIYAADKHWD
        AWYFFDCLHKHGMIPKVEHYACMVD LSRAGQ+                                   KVVGRRLVELDPNHDG YVGLSNIYAADK WD
Subjt:  AWYFFDCLHKHGMIPKVEHYACMVDVLSRAGQI----------------------------------GKVVGRRLVELDPNHDGIYVGLSNIYAADKHWD

Query:  AARNIRESMGRRGVKKSPGFSFVEVFGILHRFIAHDKTHGDSEQIYMMLNVIIDQMKPIEDYVYQEYCFYDIINVS
         A+NIRE+M RRGVKKSPGFSF+EVFGI HRFIAHDKTH DS+QIYMMLN+IIDQMKPIEDYV Q  CFYDIINVS
Subjt:  AARNIRESMGRRGVKKSPGFSFVEVFGILHRFIAHDKTHGDSEQIYMMLNVIIDQMKPIEDYVYQEYCFYDIINVS

TrEMBL top hitse value%identityAlignment
A0A0A0KMZ3 Uncharacterized protein1.1e-11776.45Show/hide
Query:  MHHYIVENELPLTVVLQTSLVDMYAKCGAIHEALAVFRACSLQQADVLIWNAIIGGLATHGLIKESVDLFFEMQIVGIVPDEITYLCLLSCCAHGGLVEE
        MH YIVENELPLT+VLQTSLVDMYAKCGAIHEAL VFRACSLQ+ADVLIWNAIIGGLATHGLIKE+++LF EM++VGIVPDEITYLCLLSCCAHGGLVEE
Subjt:  MHHYIVENELPLTVVLQTSLVDMYAKCGAIHEALAVFRACSLQQADVLIWNAIIGGLATHGLIKESVDLFFEMQIVGIVPDEITYLCLLSCCAHGGLVEE

Query:  AWYFFDCLHKHGMIPKVEHYACMVDVLSRAGQ----------------------------------IGKVVGRRLVELDPNHDGIYVGLSNIYAADKHWD
        AWYFFDCL KHGMIPKVEHYACMVD LSRAGQ                                  I KVVGRRLVELDPNHDG YVGLSNIYAADK WD
Subjt:  AWYFFDCLHKHGMIPKVEHYACMVDVLSRAGQ----------------------------------IGKVVGRRLVELDPNHDGIYVGLSNIYAADKHWD

Query:  AARNIRESMGRRGVKKSPGFSFVEVFGILHRFIAHDKTHGDSEQIYMMLNVIIDQMKPIEDYVYQEYCFYDIINVS
         A+NIRE+M R+GVKKSPGFSF+EV+G+LHRF+AHDKTHGD EQI+MMLN+I+DQMKPIEDYV+QE CFYDI+NVS
Subjt:  AARNIRESMGRRGVKKSPGFSFVEVFGILHRFIAHDKTHGDSEQIYMMLNVIIDQMKPIEDYVYQEYCFYDIINVS

A0A1S3CCZ9 pentatricopeptide repeat-containing protein At5g083053.8e-11876.81Show/hide
Query:  MHHYIVENELPLTVVLQTSLVDMYAKCGAIHEALAVFRACSLQQADVLIWNAIIGGLATHGLIKESVDLFFEMQIVGIVPDEITYLCLLSCCAHGGLVEE
        MH YIVENELPLT+VLQTSLVDMYAKCGAIHEAL VFRACSLQ+ADVLIWNAIIGGLATHGLIKES+DLF +MQ+VGIVPDEITYLCLLSCCAHGGLVEE
Subjt:  MHHYIVENELPLTVVLQTSLVDMYAKCGAIHEALAVFRACSLQQADVLIWNAIIGGLATHGLIKESVDLFFEMQIVGIVPDEITYLCLLSCCAHGGLVEE

Query:  AWYFFDCLHKHGMIPKVEHYACMVDVLSRAGQ----------------------------------IGKVVGRRLVELDPNHDGIYVGLSNIYAADKHWD
        AWYFFDCL KHGM PKVEHYACMVDVLSRAGQ                                  I KVVGRRLVELDPNHDG YVGLSNIYAADK WD
Subjt:  AWYFFDCLHKHGMIPKVEHYACMVDVLSRAGQ----------------------------------IGKVVGRRLVELDPNHDGIYVGLSNIYAADKHWD

Query:  AARNIRESMGRRGVKKSPGFSFVEVFGILHRFIAHDKTHGDSEQIYMMLNVIIDQMKPIEDYVYQEYCFYDIINVS
         A+N+RE+M R+G+KKSPGFSF+EV+GILHRF+AHDKTHGDS+QI+MMLN I+DQMKPIEDYV+QE CFYDIIN+S
Subjt:  AARNIRESMGRRGVKKSPGFSFVEVFGILHRFIAHDKTHGDSEQIYMMLNVIIDQMKPIEDYVYQEYCFYDIINVS

A0A5A7VQ87 Pentatricopeptide repeat-containing protein3.8e-11876.81Show/hide
Query:  MHHYIVENELPLTVVLQTSLVDMYAKCGAIHEALAVFRACSLQQADVLIWNAIIGGLATHGLIKESVDLFFEMQIVGIVPDEITYLCLLSCCAHGGLVEE
        MH YIVENELPLT+VLQTSLVDMYAKCGAIHEAL VFRACSLQ+ADVLIWNAIIGGLATHGLIKES+DLF +MQ+VGIVPDEITYLCLLSCCAHGGLVEE
Subjt:  MHHYIVENELPLTVVLQTSLVDMYAKCGAIHEALAVFRACSLQQADVLIWNAIIGGLATHGLIKESVDLFFEMQIVGIVPDEITYLCLLSCCAHGGLVEE

Query:  AWYFFDCLHKHGMIPKVEHYACMVDVLSRAGQ----------------------------------IGKVVGRRLVELDPNHDGIYVGLSNIYAADKHWD
        AWYFFDCL KHGM PKVEHYACMVDVLSRAGQ                                  I KVVGRRLVELDPNHDG YVGLSNIYAADK WD
Subjt:  AWYFFDCLHKHGMIPKVEHYACMVDVLSRAGQ----------------------------------IGKVVGRRLVELDPNHDGIYVGLSNIYAADKHWD

Query:  AARNIRESMGRRGVKKSPGFSFVEVFGILHRFIAHDKTHGDSEQIYMMLNVIIDQMKPIEDYVYQEYCFYDIINVS
         A+N+RE+M R+G+KKSPGFSF+EV+GILHRF+AHDKTHGDS+QI+MMLN I+DQMKPIEDYV+QE CFYDIIN+S
Subjt:  AARNIRESMGRRGVKKSPGFSFVEVFGILHRFIAHDKTHGDSEQIYMMLNVIIDQMKPIEDYVYQEYCFYDIINVS

A0A5D3DTD4 Pentatricopeptide repeat-containing protein3.8e-11876.81Show/hide
Query:  MHHYIVENELPLTVVLQTSLVDMYAKCGAIHEALAVFRACSLQQADVLIWNAIIGGLATHGLIKESVDLFFEMQIVGIVPDEITYLCLLSCCAHGGLVEE
        MH YIVENELPLT+VLQTSLVDMYAKCGAIHEAL VFRACSLQ+ADVLIWNAIIGGLATHGLIKES+DLF +MQ+VGIVPDEITYLCLLSCCAHGGLVEE
Subjt:  MHHYIVENELPLTVVLQTSLVDMYAKCGAIHEALAVFRACSLQQADVLIWNAIIGGLATHGLIKESVDLFFEMQIVGIVPDEITYLCLLSCCAHGGLVEE

Query:  AWYFFDCLHKHGMIPKVEHYACMVDVLSRAGQ----------------------------------IGKVVGRRLVELDPNHDGIYVGLSNIYAADKHWD
        AWYFFDCL KHGM PKVEHYACMVDVLSRAGQ                                  I KVVGRRLVELDPNHDG YVGLSNIYAADK WD
Subjt:  AWYFFDCLHKHGMIPKVEHYACMVDVLSRAGQ----------------------------------IGKVVGRRLVELDPNHDGIYVGLSNIYAADKHWD

Query:  AARNIRESMGRRGVKKSPGFSFVEVFGILHRFIAHDKTHGDSEQIYMMLNVIIDQMKPIEDYVYQEYCFYDIINVS
         A+N+RE+M R+G+KKSPGFSF+EV+GILHRF+AHDKTHGDS+QI+MMLN I+DQMKPIEDYV+QE CFYDIIN+S
Subjt:  AARNIRESMGRRGVKKSPGFSFVEVFGILHRFIAHDKTHGDSEQIYMMLNVIIDQMKPIEDYVYQEYCFYDIINVS

A0A6J1JFS5 pentatricopeptide repeat-containing protein At5g08305 isoform X13.1e-11274.64Show/hide
Query:  MHHYIVENELPLTVVLQTSLVDMYAKCGAIHEALAVFRACSLQQADVLIWNAIIGGLATHGLIKESVDLFFEMQIVGIVPDEITYLCLLSCCAHGGLVEE
        MH YIVENELPLT+VL TSLVDMYAKCGAIHEALA FRAC LQ+ DVLIWNAIIGGLATHGLIKES+DLF EMQ+VGI PDEITYLCLLSCCAHGGLV E
Subjt:  MHHYIVENELPLTVVLQTSLVDMYAKCGAIHEALAVFRACSLQQADVLIWNAIIGGLATHGLIKESVDLFFEMQIVGIVPDEITYLCLLSCCAHGGLVEE

Query:  AWYFFDCLHKHGMIPKVEHYACMVDVLSRAGQI----------------------------------GKVVGRRLVELDPNHDGIYVGLSNIYAADKHWD
        AWYFFDCLHKHGM PKVEHYACMVD LSRAGQ+                                   +VVGRRLVELDP+HDG Y+GLSNIYA DK W+
Subjt:  AWYFFDCLHKHGMIPKVEHYACMVDVLSRAGQI----------------------------------GKVVGRRLVELDPNHDGIYVGLSNIYAADKHWD

Query:  AARNIRESMGRRGVKKSPGFSFVEVFGILHRFIAHDKTHGDSEQIYMMLNVIIDQMKPIEDYVYQEYCFYDIINVS
         ARNIRE+M RRGVKKSPGFSFVEVFGILHRFIAHDKTHGDSE+IY+MLN+IIDQMKPIED   QE C YD+I VS
Subjt:  AARNIRESMGRRGVKKSPGFSFVEVFGILHRFIAHDKTHGDSEQIYMMLNVIIDQMKPIEDYVYQEYCFYDIINVS

SwissProt top hitse value%identityAlignment
O82380 Pentatricopeptide repeat-containing protein At2g29760, chloroplastic1.4e-4033.72Show/hide
Query:  MHHYIVENELPLTVVLQTSLVDMYAKCGAIHEALAVFRACSLQQADVLIWNAIIGGLATHGLIKESVDLFFEMQIVGIVPDEITYLCLLSCCAHGGLVEE
        +H YI ++ + +   + ++L+ MY+KCG + ++  VF   S+++ DV +W+A+IGGLA HG   E+VD+F++MQ   + P+ +T+  +   C+H GLV+E
Subjt:  MHHYIVENELPLTVVLQTSLVDMYAKCGAIHEALAVFRACSLQQADVLIWNAIIGGLATHGLIKESVDLFFEMQIVGIVPDEITYLCLLSCCAHGGLVEE

Query:  AWYFFDCLH-KHGMIPKVEHYACMVDVLSRAGQIGKVVG----------------------------------RRLVELDPNHDGIYVGLSNIYAADKHW
        A   F  +   +G++P+ +HYAC+VDVL R+G + K V                                    RL+EL+P +DG +V LSNIYA    W
Subjt:  AWYFFDCLH-KHGMIPKVEHYACMVDVLSRAGQIGKVVG----------------------------------RRLVELDPNHDGIYVGLSNIYAADKHW

Query:  DAARNIRESMGRRGVKKSPGFSFVEVFGILHRFIAHDKTHGDSEQIYMMLNVIIDQMK
        +    +R+ M   G+KK PG S +E+ G++H F++ D  H  SE++Y  L+ +++++K
Subjt:  DAARNIRESMGRRGVKKSPGFSFVEVFGILHRFIAHDKTHGDSEQIYMMLNVIIDQMK

P0C8Q7 Pentatricopeptide repeat-containing protein At5g083052.3e-6748.89Show/hide
Query:  MHHYIVENELPLTVVLQTSLVDMYAKCGAIHEALAVFRACSLQQADVLIWNAIIGGLATHGLIKESVDLFFEMQIVGIVPDEITYLCLLSCCAHGGLVEE
        +H YI++  LPLTV+LQTSL+DMYAKCG+I +A +VF   S+++ D L+WNAIIGGLA+HG I+ES+ LF +M+   I PDEIT+LCLL+ C+HGGLV+E
Subjt:  MHHYIVENELPLTVVLQTSLVDMYAKCGAIHEALAVFRACSLQQADVLIWNAIIGGLATHGLIKESVDLFFEMQIVGIVPDEITYLCLLSCCAHGGLVEE

Query:  AWYFFDCLHKHGMIPKVEHYACMVDVLSRAG----------------------------------QIGKVVGRRLVELDPNHDGIYVGLSNIYAADKHWD
        AW+FF  L + G  PK EHYACMVDVLSRAG                                  ++ + VG++L+EL P++DG YVGL+N+YA +K + 
Subjt:  AWYFFDCLHKHGMIPKVEHYACMVDVLSRAG----------------------------------QIGKVVGRRLVELDPNHDGIYVGLSNIYAADKHWD

Query:  AARNIRESMGRRGVKKSPGFSFVEVFGILHRFIAHDKTHGDSEQIYMMLNVIIDQMKPIEDYVYQE-YCF
        AAR++RE+M ++GVKK  G S +++ G  HRFIAHDKTH  S++IY +L +    M    DY  Q+ +CF
Subjt:  AARNIRESMGRRGVKKSPGFSFVEVFGILHRFIAHDKTHGDSEQIYMMLNVIIDQMKPIEDYVYQE-YCF

Q9LSB8 Putative pentatricopeptide repeat-containing protein At3g159301.4e-4035.57Show/hide
Query:  YIVENELPLTVVLQTSLVDMYAKCGAIHEALAVFRACSLQQADVLIWNAIIGGLATHGLIKESVDLFFEMQIVGIVPDEITYLCLLSCCAHGGLVEEAWY
        YI +N++   VV+  +L+DMY KCG   +A  VF    + Q D   W A++ GLA +G  +E++ +FF+MQ + I PD+ITYL +LS C H G+V++A  
Subjt:  YIVENELPLTVVLQTSLVDMYAKCGAIHEALAVFRACSLQQADVLIWNAIIGGLATHGLIKESVDLFFEMQIVGIVPDEITYLCLLSCCAHGGLVEEAWY

Query:  FFDCLHK-HGMIPKVEHYACMVDVLSRAGQI----------------------------------GKVVGRRLVELDPNHDGIYVGLSNIYAADKHWDAA
        FF  +   H + P + HY CMVD+L RAG +                                   ++  ++++EL+P++  +Y  L NIYA  K W   
Subjt:  FFDCLHK-HGMIPKVEHYACMVDVLSRAGQI----------------------------------GKVVGRRLVELDPNHDGIYVGLSNIYAADKHWDAA

Query:  RNIRESMGRRGVKKSPGFSFVEVFGILHRFIAHDKTHGDSEQIYMMLNVIIDQ
        R +R  +    +KK+PGFS +EV G  H F+A DK+H  SE+IYM L  +  +
Subjt:  RNIRESMGRRGVKKSPGFSFVEVFGILHRFIAHDKTHGDSEQIYMMLNVIIDQ

Q9SJZ3 Pentatricopeptide repeat-containing protein At2g22410, mitochondrial2.3e-4338.43Show/hide
Query:  MHHYIVENELPLTVVLQTSLVDMYAKCGAIHEALAVFRACSLQQADVLIWNAIIGGLATHGLIKESVDLFFEMQIVGIVPDEITYLCLLSCCAHGGLVEE
        +H YI +  L L V L TSLVDMYAKCG I EAL+VF    +Q  + L + AIIGGLA HG    ++  F EM   GI PDEIT++ LLS C HGG+++ 
Subjt:  MHHYIVENELPLTVVLQTSLVDMYAKCGAIHEALAVFRACSLQQADVLIWNAIIGGLATHGLIKESVDLFFEMQIVGIVPDEITYLCLLSCCAHGGLVEE

Query:  AW-YFFDCLHKHGMIPKVEHYACMVDVLSRAG----------------------------------QIGKVVGRRLVELDPNHDGIYVGLSNIYAADKHW
           YF     +  + P+++HY+ MVD+L RAG                                  ++G+   ++L+ELDP+  GIYV L  +Y     W
Subjt:  AW-YFFDCLHKHGMIPKVEHYACMVDVLSRAG----------------------------------QIGKVVGRRLVELDPNHDGIYVGLSNIYAADKHW

Query:  DAARNIRESMGRRGVKKSPGFSFVEVFGILHRFIAHDKTHGDSEQIYMMLNVIIDQMKPIEDYVYQEY
        + A+  R  M  RGV+K PG S +EV GI+  FI  DK+  +SE+IY  L+ +   M+     ++ EY
Subjt:  DAARNIRESMGRRGVKKSPGFSFVEVFGILHRFIAHDKTHGDSEQIYMMLNVIIDQMKPIEDYVYQEY

Q9SX45 Pentatricopeptide repeat-containing protein At1g502704.7e-4134.75Show/hide
Query:  MHHYIVENELPLTVVLQTSLVDMYAKCGAIHEALAVFRACSLQQADVLIWNAIIGGLATHGLIKESVDLFFEMQIVGIVPDEITYLCLLSCCAHGGLVEE
        +H Y+++N + +     T+L+D+Y KCG + EA+ VF    L + +V  W A+I G A HG  +++ DLF+ M    + P+E+T++ +LS CAHGGLVEE
Subjt:  MHHYIVENELPLTVVLQTSLVDMYAKCGAIHEALAVFRACSLQQADVLIWNAIIGGLATHGLIKESVDLFFEMQIVGIVPDEITYLCLLSCCAHGGLVEE

Query:  A-WYFFDCLHKHGMIPKVEHYACMVDVLSRAG----------------------------------QIGKVVGRRLVELDPNHDGIYVGLSNIYAADKHW
            F     +  M PK +HYACMVD+  R G                                  ++GK    R+++L P+H G Y  L+N+Y+  ++W
Subjt:  A-WYFFDCLHKHGMIPKVEHYACMVDVLSRAG----------------------------------QIGKVVGRRLVELDPNHDGIYVGLSNIYAADKHW

Query:  DAARNIRESMGRRGVKKSPGFSFVEVFGILHRFIA-HDKTHGDSEQIYMMLNVIIDQMK
        D    +R+ M  + V KSPGFS++EV G L  FIA  DK   +S+ +Y  L+ +  QM+
Subjt:  DAARNIRESMGRRGVKKSPGFSFVEVFGILHRFIA-HDKTHGDSEQIYMMLNVIIDQMK

Arabidopsis top hitse value%identityAlignment
AT1G50270.1 Pentatricopeptide repeat (PPR) superfamily protein3.4e-4234.75Show/hide
Query:  MHHYIVENELPLTVVLQTSLVDMYAKCGAIHEALAVFRACSLQQADVLIWNAIIGGLATHGLIKESVDLFFEMQIVGIVPDEITYLCLLSCCAHGGLVEE
        +H Y+++N + +     T+L+D+Y KCG + EA+ VF    L + +V  W A+I G A HG  +++ DLF+ M    + P+E+T++ +LS CAHGGLVEE
Subjt:  MHHYIVENELPLTVVLQTSLVDMYAKCGAIHEALAVFRACSLQQADVLIWNAIIGGLATHGLIKESVDLFFEMQIVGIVPDEITYLCLLSCCAHGGLVEE

Query:  A-WYFFDCLHKHGMIPKVEHYACMVDVLSRAG----------------------------------QIGKVVGRRLVELDPNHDGIYVGLSNIYAADKHW
            F     +  M PK +HYACMVD+  R G                                  ++GK    R+++L P+H G Y  L+N+Y+  ++W
Subjt:  A-WYFFDCLHKHGMIPKVEHYACMVDVLSRAG----------------------------------QIGKVVGRRLVELDPNHDGIYVGLSNIYAADKHW

Query:  DAARNIRESMGRRGVKKSPGFSFVEVFGILHRFIA-HDKTHGDSEQIYMMLNVIIDQMK
        D    +R+ M  + V KSPGFS++EV G L  FIA  DK   +S+ +Y  L+ +  QM+
Subjt:  DAARNIRESMGRRGVKKSPGFSFVEVFGILHRFIA-HDKTHGDSEQIYMMLNVIIDQMK

AT2G22410.1 SLOW GROWTH 11.6e-4438.43Show/hide
Query:  MHHYIVENELPLTVVLQTSLVDMYAKCGAIHEALAVFRACSLQQADVLIWNAIIGGLATHGLIKESVDLFFEMQIVGIVPDEITYLCLLSCCAHGGLVEE
        +H YI +  L L V L TSLVDMYAKCG I EAL+VF    +Q  + L + AIIGGLA HG    ++  F EM   GI PDEIT++ LLS C HGG+++ 
Subjt:  MHHYIVENELPLTVVLQTSLVDMYAKCGAIHEALAVFRACSLQQADVLIWNAIIGGLATHGLIKESVDLFFEMQIVGIVPDEITYLCLLSCCAHGGLVEE

Query:  AW-YFFDCLHKHGMIPKVEHYACMVDVLSRAG----------------------------------QIGKVVGRRLVELDPNHDGIYVGLSNIYAADKHW
           YF     +  + P+++HY+ MVD+L RAG                                  ++G+   ++L+ELDP+  GIYV L  +Y     W
Subjt:  AW-YFFDCLHKHGMIPKVEHYACMVDVLSRAG----------------------------------QIGKVVGRRLVELDPNHDGIYVGLSNIYAADKHW

Query:  DAARNIRESMGRRGVKKSPGFSFVEVFGILHRFIAHDKTHGDSEQIYMMLNVIIDQMKPIEDYVYQEY
        + A+  R  M  RGV+K PG S +EV GI+  FI  DK+  +SE+IY  L+ +   M+     ++ EY
Subjt:  DAARNIRESMGRRGVKKSPGFSFVEVFGILHRFIAHDKTHGDSEQIYMMLNVIIDQMKPIEDYVYQEY

AT2G29760.1 Tetratricopeptide repeat (TPR)-like superfamily protein9.8e-4233.72Show/hide
Query:  MHHYIVENELPLTVVLQTSLVDMYAKCGAIHEALAVFRACSLQQADVLIWNAIIGGLATHGLIKESVDLFFEMQIVGIVPDEITYLCLLSCCAHGGLVEE
        +H YI ++ + +   + ++L+ MY+KCG + ++  VF   S+++ DV +W+A+IGGLA HG   E+VD+F++MQ   + P+ +T+  +   C+H GLV+E
Subjt:  MHHYIVENELPLTVVLQTSLVDMYAKCGAIHEALAVFRACSLQQADVLIWNAIIGGLATHGLIKESVDLFFEMQIVGIVPDEITYLCLLSCCAHGGLVEE

Query:  AWYFFDCLH-KHGMIPKVEHYACMVDVLSRAGQIGKVVG----------------------------------RRLVELDPNHDGIYVGLSNIYAADKHW
        A   F  +   +G++P+ +HYAC+VDVL R+G + K V                                    RL+EL+P +DG +V LSNIYA    W
Subjt:  AWYFFDCLH-KHGMIPKVEHYACMVDVLSRAGQIGKVVG----------------------------------RRLVELDPNHDGIYVGLSNIYAADKHW

Query:  DAARNIRESMGRRGVKKSPGFSFVEVFGILHRFIAHDKTHGDSEQIYMMLNVIIDQMK
        +    +R+ M   G+KK PG S +E+ G++H F++ D  H  SE++Y  L+ +++++K
Subjt:  DAARNIRESMGRRGVKKSPGFSFVEVFGILHRFIAHDKTHGDSEQIYMMLNVIIDQMK

AT3G15930.1 Pentatricopeptide repeat (PPR) superfamily protein9.8e-4235.57Show/hide
Query:  YIVENELPLTVVLQTSLVDMYAKCGAIHEALAVFRACSLQQADVLIWNAIIGGLATHGLIKESVDLFFEMQIVGIVPDEITYLCLLSCCAHGGLVEEAWY
        YI +N++   VV+  +L+DMY KCG   +A  VF    + Q D   W A++ GLA +G  +E++ +FF+MQ + I PD+ITYL +LS C H G+V++A  
Subjt:  YIVENELPLTVVLQTSLVDMYAKCGAIHEALAVFRACSLQQADVLIWNAIIGGLATHGLIKESVDLFFEMQIVGIVPDEITYLCLLSCCAHGGLVEEAWY

Query:  FFDCLHK-HGMIPKVEHYACMVDVLSRAGQI----------------------------------GKVVGRRLVELDPNHDGIYVGLSNIYAADKHWDAA
        FF  +   H + P + HY CMVD+L RAG +                                   ++  ++++EL+P++  +Y  L NIYA  K W   
Subjt:  FFDCLHK-HGMIPKVEHYACMVDVLSRAGQI----------------------------------GKVVGRRLVELDPNHDGIYVGLSNIYAADKHWDAA

Query:  RNIRESMGRRGVKKSPGFSFVEVFGILHRFIAHDKTHGDSEQIYMMLNVIIDQ
        R +R  +    +KK+PGFS +EV G  H F+A DK+H  SE+IYM L  +  +
Subjt:  RNIRESMGRRGVKKSPGFSFVEVFGILHRFIAHDKTHGDSEQIYMMLNVIIDQ

AT5G08305.1 Pentatricopeptide repeat (PPR) superfamily protein1.6e-6848.89Show/hide
Query:  MHHYIVENELPLTVVLQTSLVDMYAKCGAIHEALAVFRACSLQQADVLIWNAIIGGLATHGLIKESVDLFFEMQIVGIVPDEITYLCLLSCCAHGGLVEE
        +H YI++  LPLTV+LQTSL+DMYAKCG+I +A +VF   S+++ D L+WNAIIGGLA+HG I+ES+ LF +M+   I PDEIT+LCLL+ C+HGGLV+E
Subjt:  MHHYIVENELPLTVVLQTSLVDMYAKCGAIHEALAVFRACSLQQADVLIWNAIIGGLATHGLIKESVDLFFEMQIVGIVPDEITYLCLLSCCAHGGLVEE

Query:  AWYFFDCLHKHGMIPKVEHYACMVDVLSRAG----------------------------------QIGKVVGRRLVELDPNHDGIYVGLSNIYAADKHWD
        AW+FF  L + G  PK EHYACMVDVLSRAG                                  ++ + VG++L+EL P++DG YVGL+N+YA +K + 
Subjt:  AWYFFDCLHKHGMIPKVEHYACMVDVLSRAG----------------------------------QIGKVVGRRLVELDPNHDGIYVGLSNIYAADKHWD

Query:  AARNIRESMGRRGVKKSPGFSFVEVFGILHRFIAHDKTHGDSEQIYMMLNVIIDQMKPIEDYVYQE-YCF
        AAR++RE+M ++GVKK  G S +++ G  HRFIAHDKTH  S++IY +L +    M    DY  Q+ +CF
Subjt:  AARNIRESMGRRGVKKSPGFSFVEVFGILHRFIAHDKTHGDSEQIYMMLNVIIDQMKPIEDYVYQE-YCF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACCATTATATAGTTGAGAATGAGTTGCCATTGACAGTTGTGCTGCAAACATCTCTAGTGGACATGTATGCCAAATGTGGTGCAATACATGAAGCTTTGGCTGTGTT
TCGTGCATGTTCACTACAACAGGCTGATGTTCTAATATGGAATGCTATAATTGGAGGTTTGGCAACACATGGATTGATTAAAGAGTCTGTGGACTTGTTTTTTGAGATGC
AAATTGTTGGGATTGTGCCAGATGAGATCACATACTTGTGCTTGTTAAGTTGTTGTGCTCATGGGGGACTTGTGGAAGAGGCTTGGTATTTCTTTGATTGCCTTCATAAA
CATGGTATGATTCCAAAGGTTGAGCATTATGCTTGTATGGTAGATGTCTTATCACGAGCTGGTCAGATCGGCAAAGTAGTAGGAAGGAGGCTTGTTGAGTTAGATCCAAA
TCATGATGGTATATATGTTGGCTTATCGAATATATATGCTGCTGATAAGCATTGGGATGCTGCTAGAAACATTAGAGAATCTATGGGAAGGAGGGGAGTGAAAAAATCTC
CTGGTTTTAGTTTTGTTGAAGTATTTGGAATCCTTCATCGATTCATAGCTCATGATAAAACACATGGCGATTCCGAGCAGATTTACATGATGCTGAATGTAATTATAGAT
CAAATGAAACCCATTGAAGATTATGTATATCAAGAGTACTGTTTCTATGACATCATAAATGTCTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCACCATTATATAGTTGAGAATGAGTTGCCATTGACAGTTGTGCTGCAAACATCTCTAGTGGACATGTATGCCAAATGTGGTGCAATACATGAAGCTTTGGCTGTGTT
TCGTGCATGTTCACTACAACAGGCTGATGTTCTAATATGGAATGCTATAATTGGAGGTTTGGCAACACATGGATTGATTAAAGAGTCTGTGGACTTGTTTTTTGAGATGC
AAATTGTTGGGATTGTGCCAGATGAGATCACATACTTGTGCTTGTTAAGTTGTTGTGCTCATGGGGGACTTGTGGAAGAGGCTTGGTATTTCTTTGATTGCCTTCATAAA
CATGGTATGATTCCAAAGGTTGAGCATTATGCTTGTATGGTAGATGTCTTATCACGAGCTGGTCAGATCGGCAAAGTAGTAGGAAGGAGGCTTGTTGAGTTAGATCCAAA
TCATGATGGTATATATGTTGGCTTATCGAATATATATGCTGCTGATAAGCATTGGGATGCTGCTAGAAACATTAGAGAATCTATGGGAAGGAGGGGAGTGAAAAAATCTC
CTGGTTTTAGTTTTGTTGAAGTATTTGGAATCCTTCATCGATTCATAGCTCATGATAAAACACATGGCGATTCCGAGCAGATTTACATGATGCTGAATGTAATTATAGAT
CAAATGAAACCCATTGAAGATTATGTATATCAAGAGTACTGTTTCTATGACATCATAAATGTCTCTTGA
Protein sequenceShow/hide protein sequence
MHHYIVENELPLTVVLQTSLVDMYAKCGAIHEALAVFRACSLQQADVLIWNAIIGGLATHGLIKESVDLFFEMQIVGIVPDEITYLCLLSCCAHGGLVEEAWYFFDCLHK
HGMIPKVEHYACMVDVLSRAGQIGKVVGRRLVELDPNHDGIYVGLSNIYAADKHWDAARNIRESMGRRGVKKSPGFSFVEVFGILHRFIAHDKTHGDSEQIYMMLNVIID
QMKPIEDYVYQEYCFYDIINVS