; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10009899 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10009899
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionDExH-box ATP-dependent RNA helicase DExH5, mitochondrial
Genome locationChr06:13243289..13244446
RNA-Seq ExpressionHG10009899
SyntenyHG10009899
Gene Ontology termsGO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034595.1 DExH-box ATP-dependent RNA helicase DExH5 [Cucumis melo var. makuwa]6.6e-1046.23Show/hide
Query:  DRSTNLNVLGCYLTMLPME-----------------PILIVVVRLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK
        D S NL VLG YLTMLPME                 PIL VV  L+VRD FLTPL+KKD  +  K+       D L         K  E+N+GGYD  WK
Subjt:  DRSTNLNVLGCYLTMLPME-----------------PILIVVVRLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK

Query:  NFLSVQ
        NFLS+Q
Subjt:  NFLSVQ

TYK09146.1 DExH-box ATP-dependent RNA helicase DExH5 [Cucumis melo var. makuwa]6.6e-1046.23Show/hide
Query:  DRSTNLNVLGCYLTMLPME-----------------PILIVVVRLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK
        D S NL VLG YLTMLPME                 PIL VV  L+VRD FLTPL+KKD  +  K+       D L         K  E+N+GGYD  WK
Subjt:  DRSTNLNVLGCYLTMLPME-----------------PILIVVVRLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK

Query:  NFLSVQ
        NFLS+Q
Subjt:  NFLSVQ

XP_008446652.1 PREDICTED: DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X1 [Cucumis melo]6.6e-1046.23Show/hide
Query:  DRSTNLNVLGCYLTMLPME-----------------PILIVVVRLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK
        D S NL VLG YLTMLPME                 PIL VV  L+VRD FLTPL+KKD  +  K+       D L         K  E+N+GGYD  WK
Subjt:  DRSTNLNVLGCYLTMLPME-----------------PILIVVVRLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK

Query:  NFLSVQ
        NFLS+Q
Subjt:  NFLSVQ

XP_008446653.1 PREDICTED: DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X2 [Cucumis melo]6.6e-1046.23Show/hide
Query:  DRSTNLNVLGCYLTMLPME-----------------PILIVVVRLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK
        D S NL VLG YLTMLPME                 PIL VV  L+VRD FLTPL+KKD  +  K+       D L         K  E+N+GGYD  WK
Subjt:  DRSTNLNVLGCYLTMLPME-----------------PILIVVVRLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK

Query:  NFLSVQ
        NFLS+Q
Subjt:  NFLSVQ

XP_038892223.1 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial [Benincasa hispida]7.8e-1149.06Show/hide
Query:  DRSTNLNVLGCYLTMLPME-----------------PILIVVVRLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK
        D S NL VLG YLTMLPME                 PIL VV  L+VRD FLTPL+KKDV +  K+       D L         K  E+NFGGYD  WK
Subjt:  DRSTNLNVLGCYLTMLPME-----------------PILIVVVRLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK

Query:  NFLSVQ
        NFLSVQ
Subjt:  NFLSVQ

TrEMBL top hitse value%identityAlignment
A0A1S3BF36 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X13.2e-1046.23Show/hide
Query:  DRSTNLNVLGCYLTMLPME-----------------PILIVVVRLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK
        D S NL VLG YLTMLPME                 PIL VV  L+VRD FLTPL+KKD  +  K+       D L         K  E+N+GGYD  WK
Subjt:  DRSTNLNVLGCYLTMLPME-----------------PILIVVVRLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK

Query:  NFLSVQ
        NFLS+Q
Subjt:  NFLSVQ

A0A1S3BFL6 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X23.2e-1046.23Show/hide
Query:  DRSTNLNVLGCYLTMLPME-----------------PILIVVVRLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK
        D S NL VLG YLTMLPME                 PIL VV  L+VRD FLTPL+KKD  +  K+       D L         K  E+N+GGYD  WK
Subjt:  DRSTNLNVLGCYLTMLPME-----------------PILIVVVRLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK

Query:  NFLSVQ
        NFLS+Q
Subjt:  NFLSVQ

A0A5A7SZF7 DExH-box ATP-dependent RNA helicase DExH53.2e-1046.23Show/hide
Query:  DRSTNLNVLGCYLTMLPME-----------------PILIVVVRLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK
        D S NL VLG YLTMLPME                 PIL VV  L+VRD FLTPL+KKD  +  K+       D L         K  E+N+GGYD  WK
Subjt:  DRSTNLNVLGCYLTMLPME-----------------PILIVVVRLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK

Query:  NFLSVQ
        NFLS+Q
Subjt:  NFLSVQ

A0A5D3CFK3 DExH-box ATP-dependent RNA helicase DExH53.2e-1046.23Show/hide
Query:  DRSTNLNVLGCYLTMLPME-----------------PILIVVVRLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK
        D S NL VLG YLTMLPME                 PIL VV  L+VRD FLTPL+KKD  +  K+       D L         K  E+N+GGYD  WK
Subjt:  DRSTNLNVLGCYLTMLPME-----------------PILIVVVRLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK

Query:  NFLSVQ
        NFLS+Q
Subjt:  NFLSVQ

A0A6J1JD40 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial isoform X15.5e-1046.23Show/hide
Query:  DRSTNLNVLGCYLTMLPME-----------------PILIVVVRLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK
        D S NL VLG YLTMLPME                 PIL +V   +VRD FLTPL+KKD  +  K+       D L         K  E+NFGGYD  WK
Subjt:  DRSTNLNVLGCYLTMLPME-----------------PILIVVVRLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK

Query:  NFLSVQ
        NFLSVQ
Subjt:  NFLSVQ

SwissProt top hitse value%identityAlignment
F4HYJ7 DExH-box ATP-dependent RNA helicase DExH36.7e-0534.71Show/hide
Query:  VQNQV--LMLQEHQDRSTNLNVLGCYLTMLPME-----------------PILIVVVRLNVRDSFLTPLKKKDVLQPVKAIDSLR---------------
        VQN V  L +    D   NL  LG  L+MLP+E                 P++ VV  L+VRD FL P  KKD+ +  ++  S R               
Subjt:  VQNQV--LMLQEHQDRSTNLNVLGCYLTMLPME-----------------PILIVVVRLNVRDSFLTPLKKKDVLQPVKAIDSLR---------------

Query:  KVVEKNFGGYDIYWKNFLSVQ
        K  E+   GYD  WKNFLS Q
Subjt:  KVVEKNFGGYDIYWKNFLSVQ

F4IM84 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial1.0e-0536.79Show/hide
Query:  DRSTNLNVLGCYLTMLPME-----------------PILIVVVRLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK
        D + +L  LG YL+ LPME                 PIL V   L+VRD FLTP  KKD+ +  K+       D L         K  E+    YD  WK
Subjt:  DRSTNLNVLGCYLTMLPME-----------------PILIVVVRLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK

Query:  NFLSVQ
        NFLS+Q
Subjt:  NFLSVQ

Arabidopsis top hitse value%identityAlignment
AT1G48650.1 DEA(D/H)-box RNA helicase family protein4.7e-0634.71Show/hide
Query:  VQNQV--LMLQEHQDRSTNLNVLGCYLTMLPME-----------------PILIVVVRLNVRDSFLTPLKKKDVLQPVKAIDSLR---------------
        VQN V  L +    D   NL  LG  L+MLP+E                 P++ VV  L+VRD FL P  KKD+ +  ++  S R               
Subjt:  VQNQV--LMLQEHQDRSTNLNVLGCYLTMLPME-----------------PILIVVVRLNVRDSFLTPLKKKDVLQPVKAIDSLR---------------

Query:  KVVEKNFGGYDIYWKNFLSVQ
        K  E+   GYD  WKNFLS Q
Subjt:  KVVEKNFGGYDIYWKNFLSVQ

AT1G48650.2 DEA(D/H)-box RNA helicase family protein4.7e-0634.71Show/hide
Query:  VQNQV--LMLQEHQDRSTNLNVLGCYLTMLPME-----------------PILIVVVRLNVRDSFLTPLKKKDVLQPVKAIDSLR---------------
        VQN V  L +    D   NL  LG  L+MLP+E                 P++ VV  L+VRD FL P  KKD+ +  ++  S R               
Subjt:  VQNQV--LMLQEHQDRSTNLNVLGCYLTMLPME-----------------PILIVVVRLNVRDSFLTPLKKKDVLQPVKAIDSLR---------------

Query:  KVVEKNFGGYDIYWKNFLSVQ
        K  E+   GYD  WKNFLS Q
Subjt:  KVVEKNFGGYDIYWKNFLSVQ

AT2G01130.1 DEA(D/H)-box RNA helicase family protein7.3e-0736.79Show/hide
Query:  DRSTNLNVLGCYLTMLPME-----------------PILIVVVRLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK
        D + +L  LG YL+ LPME                 PIL V   L+VRD FLTP  KKD+ +  K+       D L         K  E+    YD  WK
Subjt:  DRSTNLNVLGCYLTMLPME-----------------PILIVVVRLNVRDSFLTPLKKKDVLQPVKA------IDSLR--------KVVEKNFGGYDIYWK

Query:  NFLSVQ
        NFLS+Q
Subjt:  NFLSVQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGGGAAAAACCCCAAAAATACCGAACCAACTCTCTCGAATGCGAAAGCATCTTTCTCCCCATCAGCGGTAGAGCAGCGACTTAAGGCATTAGAAAATGCTGTGAG
TGGAATAAACAACACAATTTCTGGGATACAGCAAGCCATTGAGACACTTACAGCCGAAATTGGAAGAGCTTTTGCGATCCACAACAAAGGAAAAGGCAAAGAAATCGACT
ACGACAATCAAGAAAATCAAGAAAATCCAAGAATGCAAGAAGTTGCAAGAAGTCCACCTAGAAGACAAATTTTAGAATTTCAACCAACAATCAATTACCAAAATCATCCG
GTAGGTATTATTCCTCAACATCAAAGACCGATTCCACACAATATGATGGGATATGATTTGGACTCTTTAAACGATGAAGGTTGTTCACAATTCCACCAAAATTATTTTTC
AAGGTACCCTCCTGACTCTTTGTATCAAGAAAACTATCTTCAAGCCCAAGAACCATACCATGAACACAGAAATTATGGTCATAATGACCTTGTTTTCTATCAAGAGAAGA
ATTATGGTCGACATTTTCAAGAAAGAGCAAGAAGTCCACCAAGACCCTTCATCCAAATAAATCAAACGGGTATGAACAATTATAATTCGATTTTTGAACAACACCATCCT
CCTCATAGACCTTTTCTTCAAAATGTGGTTGGGTTTAATTTTGAAACATCAAAAGAAGAAGAAGTTGGTTGGCAAGGTTTTTCTCGATTTTCATATGAAAATCATGAGCA
ACAACACCAATTCAAGAATGTCAAAGAATGGGTTCAAGAATCGTTTCAAGATCAAATGGGCATTCAATCAAATGTTCAAGAACATGTTGCTATCCTTCAAGAACATCAAG
GCAACCCATATCGAGTCCAAAATCAAGTGCTCATGTTGCAAGAACATCAAGATAGGAGTACAAATCTTAATGTTTTAGGTTGTTATTTGACTATGCTTCCAATGGAACCA
ATTTTGATCGTTGTTGTCCGTCTTAATGTGAGAGACTCTTTTCTAACACCACTTAAGAAGAAGGATGTTTTACAACCAGTGAAGGCTATTGATTCACTAAGGAAAGTTGT
TGAGAAGAACTTTGGTGGATATGACATCTATTGGAAGAACTTTCTTTCTGTACAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCGGGAAAAACCCCAAAAATACCGAACCAACTCTCTCGAATGCGAAAGCATCTTTCTCCCCATCAGCGGTAGAGCAGCGACTTAAGGCATTAGAAAATGCTGTGAG
TGGAATAAACAACACAATTTCTGGGATACAGCAAGCCATTGAGACACTTACAGCCGAAATTGGAAGAGCTTTTGCGATCCACAACAAAGGAAAAGGCAAAGAAATCGACT
ACGACAATCAAGAAAATCAAGAAAATCCAAGAATGCAAGAAGTTGCAAGAAGTCCACCTAGAAGACAAATTTTAGAATTTCAACCAACAATCAATTACCAAAATCATCCG
GTAGGTATTATTCCTCAACATCAAAGACCGATTCCACACAATATGATGGGATATGATTTGGACTCTTTAAACGATGAAGGTTGTTCACAATTCCACCAAAATTATTTTTC
AAGGTACCCTCCTGACTCTTTGTATCAAGAAAACTATCTTCAAGCCCAAGAACCATACCATGAACACAGAAATTATGGTCATAATGACCTTGTTTTCTATCAAGAGAAGA
ATTATGGTCGACATTTTCAAGAAAGAGCAAGAAGTCCACCAAGACCCTTCATCCAAATAAATCAAACGGGTATGAACAATTATAATTCGATTTTTGAACAACACCATCCT
CCTCATAGACCTTTTCTTCAAAATGTGGTTGGGTTTAATTTTGAAACATCAAAAGAAGAAGAAGTTGGTTGGCAAGGTTTTTCTCGATTTTCATATGAAAATCATGAGCA
ACAACACCAATTCAAGAATGTCAAAGAATGGGTTCAAGAATCGTTTCAAGATCAAATGGGCATTCAATCAAATGTTCAAGAACATGTTGCTATCCTTCAAGAACATCAAG
GCAACCCATATCGAGTCCAAAATCAAGTGCTCATGTTGCAAGAACATCAAGATAGGAGTACAAATCTTAATGTTTTAGGTTGTTATTTGACTATGCTTCCAATGGAACCA
ATTTTGATCGTTGTTGTCCGTCTTAATGTGAGAGACTCTTTTCTAACACCACTTAAGAAGAAGGATGTTTTACAACCAGTGAAGGCTATTGATTCACTAAGGAAAGTTGT
TGAGAAGAACTTTGGTGGATATGACATCTATTGGAAGAACTTTCTTTCTGTACAATAA
Protein sequenceShow/hide protein sequence
MGGKNPKNTEPTLSNAKASFSPSAVEQRLKALENAVSGINNTISGIQQAIETLTAEIGRAFAIHNKGKGKEIDYDNQENQENPRMQEVARSPPRRQILEFQPTINYQNHP
VGIIPQHQRPIPHNMMGYDLDSLNDEGCSQFHQNYFSRYPPDSLYQENYLQAQEPYHEHRNYGHNDLVFYQEKNYGRHFQERARSPPRPFIQINQTGMNNYNSIFEQHHP
PHRPFLQNVVGFNFETSKEEEVGWQGFSRFSYENHEQQHQFKNVKEWVQESFQDQMGIQSNVQEHVAILQEHQGNPYRVQNQVLMLQEHQDRSTNLNVLGCYLTMLPMEP
ILIVVVRLNVRDSFLTPLKKKDVLQPVKAIDSLRKVVEKNFGGYDIYWKNFLSVQ