; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

HG10009925 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10009925
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr06:14391242..14400766
RNA-Seq ExpressionHG10009925
SyntenyHG10009925
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN75040.1 hypothetical protein VITISV_026478 [Vitis vinifera]2.3e-4027.37Show/hide
Query:  KLKVALKEWKINTFGFIESQKDAL--LKELALIDKMVE------SNSTTESLNSRRLSIKD----YDCKIGCWPSAYLGFLYMANLPHQPFGKPSWTRLR
        + +V+L ++  +T  F ++  + L  LK + L+   V         ST   +N+R+  +      +DC++  WP +YLG     N     F  P   R+ 
Subjt:  KLKVALKEWKINTFGFIESQKDAL--LKELALIDKMVE------SNSTTESLNSRRLSIKD----YDCKIGCWPSAYLGFLYMANLPHQPFGKPSWTRLR

Query:  REFH---------HGNTT-----------SFLKEKQLPS------------------------HLLCWDIHKFPLDEGGLGIGDIRKRNNSLLAKWIWCF
        R             G  T            FL   ++P+                        HL+ W++   P + GGLG G I  RN +LL KW+W F
Subjt:  REFH---------HGNTT-----------SFLKEKQLPS------------------------HLLCWDIHKFPLDEGGLGIGDIRKRNNSLLAKWIWCF

Query:  KHERWALGRRFIKAKYGSSHYGQLPSTIRHTSLRSPWCNILK---------------------------DSWIWQLEKSGVFSTKSLMYHLTTTSFSDQS
          ER  L  + I + YG+   G   + +   S R PW  I +                           DS  W L  SG+F+ KS    L+  S     
Subjt:  KHERWALGRRFIKAKYGSSHYGQLPSTIRHTSLRSPWCNILK---------------------------DSWIWQLEKSGVFSTKSLMYHLTTTSFSDQS

Query:  GLFKKIWKLPCPKRVKFLLWEVGHSCLNTTDRLQVRCPWISLSSSWCCLCHESNESIHHLLLHCKFTRVVWNEIFSAFGWTTVPPQHVFDWLSMTLIDHP
           K +W    P +VK L W V H  +NT D+LQ+R P+ SL   WC LC  + ESI HL LHC  T  +WN++F   G   VPP+   D L +      
Subjt:  GLFKKIWKLPCPKRVKFLLWEVGHSCLNTTDRLQVRCPWISLSSSWCCLCHESNESIHHLLLHCKFTRVVWNEIFSAFGWTTVPPQHVFDWLSMTLIDHP

Query:  FNATKGVVWSSIICTVISKVWEERNARIFKDTSKSTNKVLELSIFNAIFWCKNLLPLKDYSLSFLVANWNNLLYS
         +     +W     T++  VW+ERN RIF+D  +S   + +L +F +  W       +   L+ +  NW+ +  S
Subjt:  FNATKGVVWSSIICTVISKVWEERNARIFKDTSKSTNKVLELSIFNAIFWCKNLLPLKDYSLSFLVANWNNLLYS

RVW41830.1 hypothetical protein CK203_108403 [Vitis vinifera]6.0e-3632.24Show/hide
Query:  GGLGIGDIRKRNNSLLAKWIWCFKHERWALGRRFIKAKYGSSHYGQLPSTIRHTSLRSPW-----------------------------CNIL-------
        GGLG G    RN++LL KW+W F  ER  L  + I + YG+   G   + +   S R PW                              N+L       
Subjt:  GGLGIGDIRKRNNSLLAKWIWCFKHERWALGRRFIKAKYGSSHYGQLPSTIRHTSLRSPW-----------------------------CNIL-------

Query:  ---KDSWIWQLEKSGVFSTKSLMYHLTTTSFSDQSGLFKKIWKLPCPKRVKFLLWEVGHSCLNTTDRLQVRCPWISLSSSWCCLCHESNESIHHLLLHCK
            DS  W L  SG FS KS  Y L+  S        K +W    P +VK L W V H  +NT D+LQ+R P+ +L   WC LC  + ESI HL LHC 
Subjt:  ---KDSWIWQLEKSGVFSTKSLMYHLTTTSFSDQSGLFKKIWKLPCPKRVKFLLWEVGHSCLNTTDRLQVRCPWISLSSSWCCLCHESNESIHHLLLHCK

Query:  FTRVVWNEIFSAFGWTTVPPQHVFDWLSMTLIDHPFNATKGVVWSSIICTVISKVWEERNARIFKDTSKSTNKVLELSIFNAIFWCKNLLPLKDYSLSFL
         T  +W+ +F+  G   VPP+ + D L ++      +    ++W     T+I  VW+ERN RIF+D  ++   V +L  F +  W       +   LS L
Subjt:  FTRVVWNEIFSAFGWTTVPPQHVFDWLSMTLIDHPFNATKGVVWSSIICTVISKVWEERNARIFKDTSKSTNKVLELSIFNAIFWCKNLLPLKDYSLSFL

Query:  VANW
          NW
Subjt:  VANW

RVW50733.1 putative ribonuclease H protein [Vitis vinifera]5.4e-3730.27Show/hide
Query:  GCWPSAYLGFLYMANLPHQPFGKPSWTRLRREFHHGNTTS---------FLKEKQLPSHLLCWDIHKFPLDEGGLGIGDIRKRNNSLLAKWIWCFKHERW
        GC  S+    L   N          W +  R    G+  S          L+E +   HL+ W++   P + GGLG G I  RN +LL KW+W F  ER 
Subjt:  GCWPSAYLGFLYMANLPHQPFGKPSWTRLRREFHHGNTTS---------FLKEKQLPSHLLCWDIHKFPLDEGGLGIGDIRKRNNSLLAKWIWCFKHERW

Query:  ALGRRFIKAKYGSSHYGQLPSTIRHTSLRSPWCNILKDSWIWQLEKSGVFSTKSLMYHLTTTSFSDQSGLFKKIWKLPCPKRVKFLLWEVGHSCLNTTDR
         L  + I + YG+   G   + +   S R PW  I +   I+   +  V + + + +      F         +W    P +VK L W V H  +NT D+
Subjt:  ALGRRFIKAKYGSSHYGQLPSTIRHTSLRSPWCNILKDSWIWQLEKSGVFSTKSLMYHLTTTSFSDQSGLFKKIWKLPCPKRVKFLLWEVGHSCLNTTDR

Query:  LQVRCPWISLSSSWCCLCHESNESIHHLLLHCKFTRVVWNEIFSAFGWTTVPPQHVFDWLSMTLIDHPFNATKGVVWSSIICTVISKVWEERNARIFKDT
        LQ+R P+ SL   WC LC  + ESI HL LHC  T  +WN++F   G   VPP+   D L +       +     +W     T++  VW+ERN RIF+D 
Subjt:  LQVRCPWISLSSSWCCLCHESNESIHHLLLHCKFTRVVWNEIFSAFGWTTVPPQHVFDWLSMTLIDHPFNATKGVVWSSIICTVISKVWEERNARIFKDT

Query:  SKSTNKVLELSIFNAIFWCKNLLPLKDYSLSFLVANW
         +S   + +L +F +  W       +   L+ L  NW
Subjt:  SKSTNKVLELSIFNAIFWCKNLLPLKDYSLSFLVANW

RVW67766.1 hypothetical protein CK203_065561 [Vitis vinifera]2.4e-3735.77Show/hide
Query:  HLLCWDIHKFPLDEGGLGIGDIRKRNNSLLAKWIWCFKHERWALGRRFIKAKYGSSHYGQLPSTIRHTSLRSPWCNI-------------------LKDS
        HL+ WD+   P + GGLG G+   RN +LL KW+W F  ER  L  + I + YG+   G   + +   S + PW  I                   L DS
Subjt:  HLLCWDIHKFPLDEGGLGIGDIRKRNNSLLAKWIWCFKHERWALGRRFIKAKYGSSHYGQLPSTIRHTSLRSPWCNI-------------------LKDS

Query:  WIWQLEKSGVFSTKSLMYHLTTTSFSDQSGLFKKIWKLPCPKRVKFLLWEVGHSCLNTTDRLQVRCPWISLSSSWCCLCHESNESIHHLLLHCKFTRVVW
          W L  SG+FS KS    L+  S        K +W    P +VK L W V H  +NT D+LQ+R P+ SL   WC LC  + ESI+HL LHC  T  +W
Subjt:  WIWQLEKSGVFSTKSLMYHLTTTSFSDQSGLFKKIWKLPCPKRVKFLLWEVGHSCLNTTDRLQVRCPWISLSSSWCCLCHESNESIHHLLLHCKFTRVVW

Query:  NEIFSAFGWTTVPPQHVFDWLSMTLIDHPFNATKGVVWSSIICTVISKVWEERNARIFKD
        +++F+  G   VPP++  D L +       +     +W     T+I  VW+ERN RIF+D
Subjt:  NEIFSAFGWTTVPPQHVFDWLSMTLIDHPFNATKGVVWSSIICTVISKVWEERNARIFKD

RVX15530.1 putative ribonuclease H protein [Vitis vinifera]8.3e-3831.6Show/hide
Query:  HLLCWDIHKFPLDEGGLGIGDIRKRNNSLLAKWIWCFKHERWALGRRFIKAKYGSSHYGQLPSTIRHTSLRSPW---CNILKDSWI--------------
        HL+ W++   P + GGLG G I  RN +LL KW+W F  ER  L  + I + YG+   G   + +   S R PW     + ++  +              
Subjt:  HLLCWDIHKFPLDEGGLGIGDIRKRNNSLLAKWIWCFKHERWALGRRFIKAKYGSSHYGQLPSTIRHTSLRSPW---CNILKDSWI--------------

Query:  ---------WQLEKSGVFSTKSLMYHLTTTSFSDQSGLFKKIWKLPCPKRVKFLLWEVGHSCLNTTDRLQVRCPWISLSSSWCCLCHESNESIHHLLLHC
                 W L  SG+FS KS    L+  S        K +W    P +VK L W V H  +NT D+LQ+R P+ SL   WC LC  + ESI HL L+C
Subjt:  ---------WQLEKSGVFSTKSLMYHLTTTSFSDQSGLFKKIWKLPCPKRVKFLLWEVGHSCLNTTDRLQVRCPWISLSSSWCCLCHESNESIHHLLLHC

Query:  KFTRVVWNEIFSAFGWTTVPPQHVFDWLSMTLIDHPFNATKGVVWSSIICTVISKVWEERNARIFKDTSKSTNKVLELSIFNAIFWCKNLLPLKDYSLSF
          T  +WN++F   G   VPP+   D L +       +     +W     T++  VW+ERN RIF+D  +S   + +L +F +  W       +   L+ 
Subjt:  KFTRVVWNEIFSAFGWTTVPPQHVFDWLSMTLIDHPFNATKGVVWSSIICTVISKVWEERNARIFKDTSKSTNKVLELSIFNAIFWCKNLLPLKDYSLSF

Query:  LVANWNN
        L  NW +
Subjt:  LVANWNN

TrEMBL top hitse value%identityAlignment
A0A438E2J1 zf-RVT domain-containing protein2.9e-3632.24Show/hide
Query:  GGLGIGDIRKRNNSLLAKWIWCFKHERWALGRRFIKAKYGSSHYGQLPSTIRHTSLRSPW-----------------------------CNIL-------
        GGLG G    RN++LL KW+W F  ER  L  + I + YG+   G   + +   S R PW                              N+L       
Subjt:  GGLGIGDIRKRNNSLLAKWIWCFKHERWALGRRFIKAKYGSSHYGQLPSTIRHTSLRSPW-----------------------------CNIL-------

Query:  ---KDSWIWQLEKSGVFSTKSLMYHLTTTSFSDQSGLFKKIWKLPCPKRVKFLLWEVGHSCLNTTDRLQVRCPWISLSSSWCCLCHESNESIHHLLLHCK
            DS  W L  SG FS KS  Y L+  S        K +W    P +VK L W V H  +NT D+LQ+R P+ +L   WC LC  + ESI HL LHC 
Subjt:  ---KDSWIWQLEKSGVFSTKSLMYHLTTTSFSDQSGLFKKIWKLPCPKRVKFLLWEVGHSCLNTTDRLQVRCPWISLSSSWCCLCHESNESIHHLLLHCK

Query:  FTRVVWNEIFSAFGWTTVPPQHVFDWLSMTLIDHPFNATKGVVWSSIICTVISKVWEERNARIFKDTSKSTNKVLELSIFNAIFWCKNLLPLKDYSLSFL
         T  +W+ +F+  G   VPP+ + D L ++      +    ++W     T+I  VW+ERN RIF+D  ++   V +L  F +  W       +   LS L
Subjt:  FTRVVWNEIFSAFGWTTVPPQHVFDWLSMTLIDHPFNATKGVVWSSIICTVISKVWEERNARIFKDTSKSTNKVLELSIFNAIFWCKNLLPLKDYSLSFL

Query:  VANW
          NW
Subjt:  VANW

A0A438ESM4 Putative ribonuclease H protein2.6e-3730.27Show/hide
Query:  GCWPSAYLGFLYMANLPHQPFGKPSWTRLRREFHHGNTTS---------FLKEKQLPSHLLCWDIHKFPLDEGGLGIGDIRKRNNSLLAKWIWCFKHERW
        GC  S+    L   N          W +  R    G+  S          L+E +   HL+ W++   P + GGLG G I  RN +LL KW+W F  ER 
Subjt:  GCWPSAYLGFLYMANLPHQPFGKPSWTRLRREFHHGNTTS---------FLKEKQLPSHLLCWDIHKFPLDEGGLGIGDIRKRNNSLLAKWIWCFKHERW

Query:  ALGRRFIKAKYGSSHYGQLPSTIRHTSLRSPWCNILKDSWIWQLEKSGVFSTKSLMYHLTTTSFSDQSGLFKKIWKLPCPKRVKFLLWEVGHSCLNTTDR
         L  + I + YG+   G   + +   S R PW  I +   I+   +  V + + + +      F         +W    P +VK L W V H  +NT D+
Subjt:  ALGRRFIKAKYGSSHYGQLPSTIRHTSLRSPWCNILKDSWIWQLEKSGVFSTKSLMYHLTTTSFSDQSGLFKKIWKLPCPKRVKFLLWEVGHSCLNTTDR

Query:  LQVRCPWISLSSSWCCLCHESNESIHHLLLHCKFTRVVWNEIFSAFGWTTVPPQHVFDWLSMTLIDHPFNATKGVVWSSIICTVISKVWEERNARIFKDT
        LQ+R P+ SL   WC LC  + ESI HL LHC  T  +WN++F   G   VPP+   D L +       +     +W     T++  VW+ERN RIF+D 
Subjt:  LQVRCPWISLSSSWCCLCHESNESIHHLLLHCKFTRVVWNEIFSAFGWTTVPPQHVFDWLSMTLIDHPFNATKGVVWSSIICTVISKVWEERNARIFKDT

Query:  SKSTNKVLELSIFNAIFWCKNLLPLKDYSLSFLVANW
         +S   + +L +F +  W       +   L+ L  NW
Subjt:  SKSTNKVLELSIFNAIFWCKNLLPLKDYSLSFLVANW

A0A438G6D2 Uncharacterized protein1.2e-3735.77Show/hide
Query:  HLLCWDIHKFPLDEGGLGIGDIRKRNNSLLAKWIWCFKHERWALGRRFIKAKYGSSHYGQLPSTIRHTSLRSPWCNI-------------------LKDS
        HL+ WD+   P + GGLG G+   RN +LL KW+W F  ER  L  + I + YG+   G   + +   S + PW  I                   L DS
Subjt:  HLLCWDIHKFPLDEGGLGIGDIRKRNNSLLAKWIWCFKHERWALGRRFIKAKYGSSHYGQLPSTIRHTSLRSPWCNI-------------------LKDS

Query:  WIWQLEKSGVFSTKSLMYHLTTTSFSDQSGLFKKIWKLPCPKRVKFLLWEVGHSCLNTTDRLQVRCPWISLSSSWCCLCHESNESIHHLLLHCKFTRVVW
          W L  SG+FS KS    L+  S        K +W    P +VK L W V H  +NT D+LQ+R P+ SL   WC LC  + ESI+HL LHC  T  +W
Subjt:  WIWQLEKSGVFSTKSLMYHLTTTSFSDQSGLFKKIWKLPCPKRVKFLLWEVGHSCLNTTDRLQVRCPWISLSSSWCCLCHESNESIHHLLLHCKFTRVVW

Query:  NEIFSAFGWTTVPPQHVFDWLSMTLIDHPFNATKGVVWSSIICTVISKVWEERNARIFKD
        +++F+  G   VPP++  D L +       +     +W     T+I  VW+ERN RIF+D
Subjt:  NEIFSAFGWTTVPPQHVFDWLSMTLIDHPFNATKGVVWSSIICTVISKVWEERNARIFKD

A0A438K2W1 Putative ribonuclease H protein4.0e-3831.6Show/hide
Query:  HLLCWDIHKFPLDEGGLGIGDIRKRNNSLLAKWIWCFKHERWALGRRFIKAKYGSSHYGQLPSTIRHTSLRSPW---CNILKDSWI--------------
        HL+ W++   P + GGLG G I  RN +LL KW+W F  ER  L  + I + YG+   G   + +   S R PW     + ++  +              
Subjt:  HLLCWDIHKFPLDEGGLGIGDIRKRNNSLLAKWIWCFKHERWALGRRFIKAKYGSSHYGQLPSTIRHTSLRSPW---CNILKDSWI--------------

Query:  ---------WQLEKSGVFSTKSLMYHLTTTSFSDQSGLFKKIWKLPCPKRVKFLLWEVGHSCLNTTDRLQVRCPWISLSSSWCCLCHESNESIHHLLLHC
                 W L  SG+FS KS    L+  S        K +W    P +VK L W V H  +NT D+LQ+R P+ SL   WC LC  + ESI HL L+C
Subjt:  ---------WQLEKSGVFSTKSLMYHLTTTSFSDQSGLFKKIWKLPCPKRVKFLLWEVGHSCLNTTDRLQVRCPWISLSSSWCCLCHESNESIHHLLLHC

Query:  KFTRVVWNEIFSAFGWTTVPPQHVFDWLSMTLIDHPFNATKGVVWSSIICTVISKVWEERNARIFKDTSKSTNKVLELSIFNAIFWCKNLLPLKDYSLSF
          T  +WN++F   G   VPP+   D L +       +     +W     T++  VW+ERN RIF+D  +S   + +L +F +  W       +   L+ 
Subjt:  KFTRVVWNEIFSAFGWTTVPPQHVFDWLSMTLIDHPFNATKGVVWSSIICTVISKVWEERNARIFKDTSKSTNKVLELSIFNAIFWCKNLLPLKDYSLSF

Query:  LVANWNN
        L  NW +
Subjt:  LVANWNN

A5BV95 Reverse transcriptase domain-containing protein1.1e-4027.37Show/hide
Query:  KLKVALKEWKINTFGFIESQKDAL--LKELALIDKMVE------SNSTTESLNSRRLSIKD----YDCKIGCWPSAYLGFLYMANLPHQPFGKPSWTRLR
        + +V+L ++  +T  F ++  + L  LK + L+   V         ST   +N+R+  +      +DC++  WP +YLG     N     F  P   R+ 
Subjt:  KLKVALKEWKINTFGFIESQKDAL--LKELALIDKMVE------SNSTTESLNSRRLSIKD----YDCKIGCWPSAYLGFLYMANLPHQPFGKPSWTRLR

Query:  REFH---------HGNTT-----------SFLKEKQLPS------------------------HLLCWDIHKFPLDEGGLGIGDIRKRNNSLLAKWIWCF
        R             G  T            FL   ++P+                        HL+ W++   P + GGLG G I  RN +LL KW+W F
Subjt:  REFH---------HGNTT-----------SFLKEKQLPS------------------------HLLCWDIHKFPLDEGGLGIGDIRKRNNSLLAKWIWCF

Query:  KHERWALGRRFIKAKYGSSHYGQLPSTIRHTSLRSPWCNILK---------------------------DSWIWQLEKSGVFSTKSLMYHLTTTSFSDQS
          ER  L  + I + YG+   G   + +   S R PW  I +                           DS  W L  SG+F+ KS    L+  S     
Subjt:  KHERWALGRRFIKAKYGSSHYGQLPSTIRHTSLRSPWCNILK---------------------------DSWIWQLEKSGVFSTKSLMYHLTTTSFSDQS

Query:  GLFKKIWKLPCPKRVKFLLWEVGHSCLNTTDRLQVRCPWISLSSSWCCLCHESNESIHHLLLHCKFTRVVWNEIFSAFGWTTVPPQHVFDWLSMTLIDHP
           K +W    P +VK L W V H  +NT D+LQ+R P+ SL   WC LC  + ESI HL LHC  T  +WN++F   G   VPP+   D L +      
Subjt:  GLFKKIWKLPCPKRVKFLLWEVGHSCLNTTDRLQVRCPWISLSSSWCCLCHESNESIHHLLLHCKFTRVVWNEIFSAFGWTTVPPQHVFDWLSMTLIDHP

Query:  FNATKGVVWSSIICTVISKVWEERNARIFKDTSKSTNKVLELSIFNAIFWCKNLLPLKDYSLSFLVANWNNLLYS
         +     +W     T++  VW+ERN RIF+D  +S   + +L +F +  W       +   L+ +  NW+ +  S
Subjt:  FNATKGVVWSSIICTVISKVWEERNARIFKDTSKSTNKVLELSIFNAIFWCKNLLPLKDYSLSFLVANWNNLLYS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G06845.1 Beta-galactosidase related protein1.7e-0427.88Show/hide
Query:  CCLCHESNESIHHLLLHCKFTRVVWNEIFSAFGWTTVPPQHVFDWLSMTLIDHPFNATKGVVWSSIICTVISKVWEERNARIFKDTSKSTNKVLELSIFN
        CC C E  E+I H+L HC+F ++VW+    A  W +V    V + L +T          G+    +   +   +W+ RN ++F     +  + L  +I N
Subjt:  CCLCHESNESIHHLLLHCKFTRVVWNEIFSAFGWTTVPPQHVFDWLSMTLIDHPFNATKGVVWSSIICTVISKVWEERNARIFKDTSKSTNKVLELSIFN

Query:  AIFW
        A  W
Subjt:  AIFW

AT3G25720.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein4.5e-0521.62Show/hide
Query:  PLDEGGLGIGDIRKRNNSLLAKWIWCFKHERWALGRRFIKAKYGSSHYGQLPSTIRHTSLRSPWCN--ILKDSWIWQL-----EKSGVFSTKSLMYHLTT
        P  EGGLG+    + N +L  K +W     R   G   +   +   H+ Q    +   S+   W +  ++ DSW W+        +  F   ++   LT 
Subjt:  PLDEGGLGIGDIRKRNNSLLAKWIWCFKHERWALGRRFIKAKYGSSHYGQLPSTIRHTSLRSPWCN--ILKDSWIWQL-----EKSGVFSTKSLMYHLTT

Query:  TSFSDQSGLFKKIWKLPCPKRVKFLLWEVGHSCLNTTDRLQVRCPWISLSSSWCCLCHESNESIHHLLLHCKFTRVVWNEIFSAFGWTTVPPQHVFDWLS
          ++D    F  +       R   L   +  S  + T  +     W    S  CCLC  + E+  HLLL C F++ +W+ + S     ++      +W  
Subjt:  TSFSDQSGLFKKIWKLPCPKRVKFLLWEVGHSCLNTTDRLQVRCPWISLSSSWCCLCHESNESIHHLLLHCKFTRVVWNEIFSAFGWTTVPPQHVFDWLS

Query:  MTL-IDHPFNATKGVVWSSIICTVISKVWEERNARIFKD---TSKSTNKVLELSIFNAI
        + L I     +    +   +  +V+   W++RN  +         S  K+++  I N+I
Subjt:  MTL-IDHPFNATKGVVWSSIICTVISKVWEERNARIFKD---TSKSTNKVLELSIFNAI

AT4G10613.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein9.9e-0525.71Show/hide
Query:  LNTTDRLQVRCPWISLS---SSWCCLCHESNESIHHLLLHCKFTRVVWNEIFSAFGWTTVP---PQHVFDWLSMTLIDHPFNATKGVVWSSIICTVISKV
        ++  DRL  R   +S     S  CCLC +S E+  HL+L C F+  +WN + +      V     + +  W+ ++    P +  + +V  + +C     +
Subjt:  LNTTDRLQVRCPWISLS---SSWCCLCHESNESIHHLLLHCKFTRVVWNEIFSAFGWTTVP---PQHVFDWLSMTLIDHPFNATKGVVWSSIICTVISKV

Query:  WEERN
        W++RN
Subjt:  WEERN

AT5G18880.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.6e-0727.01Show/hide
Query:  KKIWKLPCPKRVKFLLWEVGHSCLNTTDRLQVRCPW-ISLSSSWCCLCHESNESIHHLLLHCKFTRVVWNEIFSAFGWTTVPPQHVFDWLSMTLIDHPFN
        K +W      R   + W      L T DRL+    W +++ SSW  LC   +E+  HL   C F+  +W    S F      P       S  ++  P  
Subjt:  KKIWKLPCPKRVKFLLWEVGHSCLNTTDRLQVRCPW-ISLSSSWCCLCHESNESIHHLLLHCKFTRVVWNEIFSAFGWTTVPPQHVFDWLSMTLIDHPFN

Query:  ATKGVVWSSIICTVISKVWEERNARIFKDTSKSTNKV
        +    +   ++ + +  VW+ERNARIF   S S + +
Subjt:  ATKGVVWSSIICTVISKVWEERNARIFKDTSKSTNKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGATCAAACATTCAAATTTTTTACCTTTTTTGGATGAATGGTGGAACAGCCATCAACACTCTAGAAGGCCGGGTCATGGGCTCATTCAAAAACTTAAGAAATTGAA
GGTTGCCTTAAAAGAATGGAAGATCAACACCTTTGGGTTTATTGAATCACAGAAAGATGCATTATTAAAGGAATTGGCTCTTATTGACAAAATGGTTGAATCAAACTCCA
CCACGGAGTCCCTTAACAGTCGTCGTTTATCTATCAAAGATTATGATTGTAAAATTGGCTGCTGGCCATCTGCATATTTGGGCTTTCTCTACATGGCAAACCTTCCTCAC
CAACCTTTTGGCAAACCATCATGGACAAGATTGAGAAGAGAATTTCATCATGGCAACACAACTTCCTTTCTAAAGGAGAAACAGCTCCCCTCCCACCTTCTCTGTTGGGA
CATTCATAAATTCCCTCTAGATGAGGGTGGTCTTGGCATTGGAGATATCAGAAAACGAAACAATTCATTATTGGCAAAGTGGATATGGTGTTTCAAACACGAAAGATGGG
CTCTAGGGAGGAGATTCATCAAGGCTAAATATGGGTCAAGTCATTACGGTCAACTCCCTTCCACCATTCGGCATACATCTTTAAGAAGTCCATGGTGCAACATTTTGAAG
GATAGTTGGATATGGCAGCTTGAAAAGAGTGGCGTTTTCTCTACCAAATCACTGATGTACCACTTAACCACGACATCGTTCTCTGACCAATCTGGATTATTCAAAAAGAT
ATGGAAGCTTCCATGTCCTAAAAGAGTTAAATTCCTATTGTGGGAAGTGGGTCATTCTTGCCTCAATACTACGGACAGACTACAAGTCAGATGCCCTTGGATTAGCTTAT
CCTCATCATGGTGCTGCCTTTGTCATGAATCAAATGAATCTATCCATCATTTACTTCTCCATTGCAAATTTACCAGAGTTGTATGGAATGAAATCTTTAGTGCCTTTGGA
TGGACCACCGTGCCTCCTCAACATGTTTTTGACTGGCTCAGCATGACACTTATCGACCACCCTTTCAATGCCACTAAAGGAGTTGTTTGGTCTAGTATCATTTGTACGGT
GATATCAAAGGTTTGGGAAGAGAGGAACGCGAGGATTTTCAAAGATACATCCAAGTCCACAAATAAAGTGCTTGAATTATCCATTTTCAACGCAATCTTTTGGTGTAAAA
ATTTACTTCCCCTCAAAGATTACAGTTTATCTTTTCTTGTTGCTAATTGGAACAACCTTTTGTATTCCCTATAA
mRNA sequenceShow/hide mRNA sequence
ATGTGGATCAAACATTCAAATTTTTTACCTTTTTTGGATGAATGGTGGAACAGCCATCAACACTCTAGAAGGCCGGGTCATGGGCTCATTCAAAAACTTAAGAAATTGAA
GGTTGCCTTAAAAGAATGGAAGATCAACACCTTTGGGTTTATTGAATCACAGAAAGATGCATTATTAAAGGAATTGGCTCTTATTGACAAAATGGTTGAATCAAACTCCA
CCACGGAGTCCCTTAACAGTCGTCGTTTATCTATCAAAGATTATGATTGTAAAATTGGCTGCTGGCCATCTGCATATTTGGGCTTTCTCTACATGGCAAACCTTCCTCAC
CAACCTTTTGGCAAACCATCATGGACAAGATTGAGAAGAGAATTTCATCATGGCAACACAACTTCCTTTCTAAAGGAGAAACAGCTCCCCTCCCACCTTCTCTGTTGGGA
CATTCATAAATTCCCTCTAGATGAGGGTGGTCTTGGCATTGGAGATATCAGAAAACGAAACAATTCATTATTGGCAAAGTGGATATGGTGTTTCAAACACGAAAGATGGG
CTCTAGGGAGGAGATTCATCAAGGCTAAATATGGGTCAAGTCATTACGGTCAACTCCCTTCCACCATTCGGCATACATCTTTAAGAAGTCCATGGTGCAACATTTTGAAG
GATAGTTGGATATGGCAGCTTGAAAAGAGTGGCGTTTTCTCTACCAAATCACTGATGTACCACTTAACCACGACATCGTTCTCTGACCAATCTGGATTATTCAAAAAGAT
ATGGAAGCTTCCATGTCCTAAAAGAGTTAAATTCCTATTGTGGGAAGTGGGTCATTCTTGCCTCAATACTACGGACAGACTACAAGTCAGATGCCCTTGGATTAGCTTAT
CCTCATCATGGTGCTGCCTTTGTCATGAATCAAATGAATCTATCCATCATTTACTTCTCCATTGCAAATTTACCAGAGTTGTATGGAATGAAATCTTTAGTGCCTTTGGA
TGGACCACCGTGCCTCCTCAACATGTTTTTGACTGGCTCAGCATGACACTTATCGACCACCCTTTCAATGCCACTAAAGGAGTTGTTTGGTCTAGTATCATTTGTACGGT
GATATCAAAGGTTTGGGAAGAGAGGAACGCGAGGATTTTCAAAGATACATCCAAGTCCACAAATAAAGTGCTTGAATTATCCATTTTCAACGCAATCTTTTGGTGTAAAA
ATTTACTTCCCCTCAAAGATTACAGTTTATCTTTTCTTGTTGCTAATTGGAACAACCTTTTGTATTCCCTATAA
Protein sequenceShow/hide protein sequence
MWIKHSNFLPFLDEWWNSHQHSRRPGHGLIQKLKKLKVALKEWKINTFGFIESQKDALLKELALIDKMVESNSTTESLNSRRLSIKDYDCKIGCWPSAYLGFLYMANLPH
QPFGKPSWTRLRREFHHGNTTSFLKEKQLPSHLLCWDIHKFPLDEGGLGIGDIRKRNNSLLAKWIWCFKHERWALGRRFIKAKYGSSHYGQLPSTIRHTSLRSPWCNILK
DSWIWQLEKSGVFSTKSLMYHLTTTSFSDQSGLFKKIWKLPCPKRVKFLLWEVGHSCLNTTDRLQVRCPWISLSSSWCCLCHESNESIHHLLLHCKFTRVVWNEIFSAFG
WTTVPPQHVFDWLSMTLIDHPFNATKGVVWSSIICTVISKVWEERNARIFKDTSKSTNKVLELSIFNAIFWCKNLLPLKDYSLSFLVANWNNLLYSL