CuGenDBv2

Gene ID	HG10009927
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	zinc finger protein JAGGED
Genome location	Chr06:14495029..14501336
RNA-Seq Expression	HG10009927
Synteny	HG10009927
Gene Ontology terms	GO:0007275 - multicellular organism development (biological process) GO:0009451 - RNA modification (biological process)
InterPro domains	IPR031113 - Zinc finger protein JAGGED-like

Homology

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GenBank top hits

e value

%identity

Alignment

KGN51212.2 hypothetical protein Csa_008797 [Cucumis sativus]

1.2e-79

74.11

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Query:  RSEGSPLDLTNLPEDYIRDGKQIIEDSSS--------------------------------------------ERETETLNRARQLVFSNDNLAAQPPPP
        RSEGSPLDL NLPEDYIRDGKQIIEDSSS                                            ERETETLNRARQLVFSNDNLAAQ PPP
Subjt:  RSEGSPLDLTNLPEDYIRDGKQIIEDSSS--------------------------------------------ERETETLNRARQLVFSNDNLAAQPPPP

Query:  PHLGCCHSMAPANYHTPGGGGGGGVGTDSTLPLRFPTRMFSGSSPSTLLPQPPPPTLPPSHQPYLYSSPSRPSSFPSYYPPPQASINDYYVGHVLGNPSQ
        PHLGCCHSMAPANYH+   GG G VG+DSTLPLRFPTRMFSGSSP TLLPQPPPP LP SHQPYLY+SP+RPSSFPSYYPPPQASINDYYVGHVLGNPSQ
Subjt:  PHLGCCHSMAPANYHTPGGGGGGGVGTDSTLPLRFPTRMFSGSSPSTLLPQPPPPTLPPSHQPYLYSSPSRPSSFPSYYPPPQASINDYYVGHVLGNPSQ

Query:  CSHQTVNYGSSSVESSSYTCIGAP
        CSHQTVNYGSSSVESSSYTCIGAP
Subjt:  CSHQTVNYGSSSVESSSYTCIGAP

TYK04130.1 zinc finger protein JAGGED [Cucumis melo var. makuwa]

1.5e-80

77.21

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Query:  RSEGSPLDLTNLPEDYIRDGKQIIEDSSS-----------------------------------ERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSM
        RSEGSPLDL NLPEDYIRDGKQIIEDSSS                                   ERETETLNRARQLVFSNDNLAAQ PPPPHLGCCHSM
Subjt:  RSEGSPLDLTNLPEDYIRDGKQIIEDSSS-----------------------------------ERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSM

Query:  APANYHTPGGGGGGGVGTDSTLPLRFPTRMFSGSSPSTLLPQPPPPTLPPSHQPYLYSSPSRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYG
        APANYHT   GG G VG+DSTLPLRFPTRMFSGSSP TLLPQPPPP LP SHQPYLY+SP+RPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYG
Subjt:  APANYHTPGGGGGGGVGTDSTLPLRFPTRMFSGSSPSTLLPQPPPPTLPPSHQPYLYSSPSRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYG

Query:  SSSVESSSYTCIGAP
        SS VESSSYTCIGAP
Subjt:  SSSVESSSYTCIGAP

XP_008465782.1 PREDICTED: zinc finger protein JAGGED [Cucumis melo]

1.0e-81

74.55

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Query:  RSEGSPLDLTNLPEDYIRDGKQIIEDSSS--------------------------------------------ERETETLNRARQLVFSNDNLAAQPPPP
        RSEGSPLDL NLPEDYIRDGKQIIEDSSS                                            ERETETLNRARQLVFSNDNLAAQPPPP
Subjt:  RSEGSPLDLTNLPEDYIRDGKQIIEDSSS--------------------------------------------ERETETLNRARQLVFSNDNLAAQPPPP

Query:  PHLGCCHSMAPANYHTPGGGGGGGVGTDSTLPLRFPTRMFSGSSPSTLLPQPPPPTLPPSHQPYLYSSPSRPSSFPSYYPPPQASINDYYVGHVLGNPSQ
        PHLGCCHSMAPANYHT   GG G VG+DSTLPLRFPTRMFSGSSP TLLPQPPPP LP SHQPYLY+SP+RPSSFPSYYPPPQASINDYYVGHVLGNPSQ
Subjt:  PHLGCCHSMAPANYHTPGGGGGGGVGTDSTLPLRFPTRMFSGSSPSTLLPQPPPPTLPPSHQPYLYSSPSRPSSFPSYYPPPQASINDYYVGHVLGNPSQ

Query:  CSHQTVNYGSSSVESSSYTCIGAP
        CSHQTVNYGSS VESSSYTCIGAP
Subjt:  CSHQTVNYGSSSVESSSYTCIGAP

XP_011655169.1 zinc finger protein JAGGED [Cucumis sativus]

1.2e-79

74.11

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Query:  RSEGSPLDLTNLPEDYIRDGKQIIEDSSS--------------------------------------------ERETETLNRARQLVFSNDNLAAQPPPP
        RSEGSPLDL NLPEDYIRDGKQIIEDSSS                                            ERETETLNRARQLVFSNDNLAAQ PPP
Subjt:  RSEGSPLDLTNLPEDYIRDGKQIIEDSSS--------------------------------------------ERETETLNRARQLVFSNDNLAAQPPPP

Query:  PHLGCCHSMAPANYHTPGGGGGGGVGTDSTLPLRFPTRMFSGSSPSTLLPQPPPPTLPPSHQPYLYSSPSRPSSFPSYYPPPQASINDYYVGHVLGNPSQ
        PHLGCCHSMAPANYH+   GG G VG+DSTLPLRFPTRMFSGSSP TLLPQPPPP LP SHQPYLY+SP+RPSSFPSYYPPPQASINDYYVGHVLGNPSQ
Subjt:  PHLGCCHSMAPANYHTPGGGGGGGVGTDSTLPLRFPTRMFSGSSPSTLLPQPPPPTLPPSHQPYLYSSPSRPSSFPSYYPPPQASINDYYVGHVLGNPSQ

Query:  CSHQTVNYGSSSVESSSYTCIGAP
        CSHQTVNYGSSSVESSSYTCIGAP
Subjt:  CSHQTVNYGSSSVESSSYTCIGAP

XP_038876123.1 zinc finger protein JAGGED-like [Benincasa hispida]

2.4e-83

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Query:  RSEGSPLDLTNLPEDYIRDGKQIIEDSSS--------------------------------------------ERETETLNRARQLVFSNDNLAAQPPPP
        RSEGSPLDL NLPEDYIRDGKQIIEDSS+                                            ERETETLNRARQLVFSNDNLAAQPPPP
Subjt:  RSEGSPLDLTNLPEDYIRDGKQIIEDSSS--------------------------------------------ERETETLNRARQLVFSNDNLAAQPPPP

Query:  PHLGCCHSMAPANYHTPGGGGGGGVGTDSTLPLRFPTRMFSGSSPSTLLPQPPPPTLPPSHQPYLYSSPSRPSSFPSYYPPPQASINDYYVGHVLGNPSQ
        PHLGCCHSMAPANYHT  GGGG GVG+DSTLPLRFPTRMFSGSSPS+LLPQPPPP LPPSHQPYLYSSPSRPSSFPSYYPPPQASINDYYVGHVLGNPSQ
Subjt:  PHLGCCHSMAPANYHTPGGGGGGGVGTDSTLPLRFPTRMFSGSSPSTLLPQPPPPTLPPSHQPYLYSSPSRPSSFPSYYPPPQASINDYYVGHVLGNPSQ

Query:  CSHQTVNYGSSSVESSSYTCIGAP
        CSHQTVNYGSSSVE +SY C+GAP
Subjt:  CSHQTVNYGSSSVESSSYTCIGAP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KTC2 C2H2-type domain-containing protein

6.0e-80

74.11

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Query:  RSEGSPLDLTNLPEDYIRDGKQIIEDSSS--------------------------------------------ERETETLNRARQLVFSNDNLAAQPPPP
        RSEGSPLDL NLPEDYIRDGKQIIEDSSS                                            ERETETLNRARQLVFSNDNLAAQ PPP
Subjt:  RSEGSPLDLTNLPEDYIRDGKQIIEDSSS--------------------------------------------ERETETLNRARQLVFSNDNLAAQPPPP

Query:  PHLGCCHSMAPANYHTPGGGGGGGVGTDSTLPLRFPTRMFSGSSPSTLLPQPPPPTLPPSHQPYLYSSPSRPSSFPSYYPPPQASINDYYVGHVLGNPSQ
        PHLGCCHSMAPANYH+   GG G VG+DSTLPLRFPTRMFSGSSP TLLPQPPPP LP SHQPYLY+SP+RPSSFPSYYPPPQASINDYYVGHVLGNPSQ
Subjt:  PHLGCCHSMAPANYHTPGGGGGGGVGTDSTLPLRFPTRMFSGSSPSTLLPQPPPPTLPPSHQPYLYSSPSRPSSFPSYYPPPQASINDYYVGHVLGNPSQ

Query:  CSHQTVNYGSSSVESSSYTCIGAP
        CSHQTVNYGSSSVESSSYTCIGAP
Subjt:  CSHQTVNYGSSSVESSSYTCIGAP

A0A1S3CQ11 zinc finger protein JAGGED

4.9e-82

74.55

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Query:  RSEGSPLDLTNLPEDYIRDGKQIIEDSSS--------------------------------------------ERETETLNRARQLVFSNDNLAAQPPPP
        RSEGSPLDL NLPEDYIRDGKQIIEDSSS                                            ERETETLNRARQLVFSNDNLAAQPPPP
Subjt:  RSEGSPLDLTNLPEDYIRDGKQIIEDSSS--------------------------------------------ERETETLNRARQLVFSNDNLAAQPPPP

Query:  PHLGCCHSMAPANYHTPGGGGGGGVGTDSTLPLRFPTRMFSGSSPSTLLPQPPPPTLPPSHQPYLYSSPSRPSSFPSYYPPPQASINDYYVGHVLGNPSQ
        PHLGCCHSMAPANYHT   GG G VG+DSTLPLRFPTRMFSGSSP TLLPQPPPP LP SHQPYLY+SP+RPSSFPSYYPPPQASINDYYVGHVLGNPSQ
Subjt:  PHLGCCHSMAPANYHTPGGGGGGGVGTDSTLPLRFPTRMFSGSSPSTLLPQPPPPTLPPSHQPYLYSSPSRPSSFPSYYPPPQASINDYYVGHVLGNPSQ

Query:  CSHQTVNYGSSSVESSSYTCIGAP
        CSHQTVNYGSS VESSSYTCIGAP
Subjt:  CSHQTVNYGSSSVESSSYTCIGAP

A0A5A7U1F5 Zinc finger protein JAGGED

7.8e-80

74.11

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Query:  RSEGSPLDLTNLPEDYIRDGKQIIEDSSS--------------------------------------------ERETETLNRARQLVFSNDNLAAQPPPP
        RSEGSPLDL NLPEDYIRDGKQIIEDSSS                                            ERETETLNRARQLVFSNDNLAAQ PPP
Subjt:  RSEGSPLDLTNLPEDYIRDGKQIIEDSSS--------------------------------------------ERETETLNRARQLVFSNDNLAAQPPPP

Query:  PHLGCCHSMAPANYHTPGGGGGGGVGTDSTLPLRFPTRMFSGSSPSTLLPQPPPPTLPPSHQPYLYSSPSRPSSFPSYYPPPQASINDYYVGHVLGNPSQ
        PHLGCCHSMAPANYHT   GG G VG+DSTLPLRFPTRMFSGSSP TLLPQPPPP LP SHQPYLY+SP+RPSSFPSYYPPPQASINDYYVGHVLGNPSQ
Subjt:  PHLGCCHSMAPANYHTPGGGGGGGVGTDSTLPLRFPTRMFSGSSPSTLLPQPPPPTLPPSHQPYLYSSPSRPSSFPSYYPPPQASINDYYVGHVLGNPSQ

Query:  CSHQTVNYGSSSVESSSYTCIGAP
        CSHQTVNYGSS VESSSYTCIGAP
Subjt:  CSHQTVNYGSSSVESSSYTCIGAP

A0A5D3BYD4 Zinc finger protein JAGGED

7.0e-81

77.21

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Query:  RSEGSPLDLTNLPEDYIRDGKQIIEDSSS-----------------------------------ERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSM
        RSEGSPLDL NLPEDYIRDGKQIIEDSSS                                   ERETETLNRARQLVFSNDNLAAQ PPPPHLGCCHSM
Subjt:  RSEGSPLDLTNLPEDYIRDGKQIIEDSSS-----------------------------------ERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSM

Query:  APANYHTPGGGGGGGVGTDSTLPLRFPTRMFSGSSPSTLLPQPPPPTLPPSHQPYLYSSPSRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYG
        APANYHT   GG G VG+DSTLPLRFPTRMFSGSSP TLLPQPPPP LP SHQPYLY+SP+RPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYG
Subjt:  APANYHTPGGGGGGGVGTDSTLPLRFPTRMFSGSSPSTLLPQPPPPTLPPSHQPYLYSSPSRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYG

Query:  SSSVESSSYTCIGAP
        SS VESSSYTCIGAP
Subjt:  SSSVESSSYTCIGAP

A0A6J1I6U1 zinc finger protein JAGGED-like

1.1e-68

66.96

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Query:  RSEGSPLDLTNLPEDYIRDGKQIIEDSSS--------------------------------------------ERETETLNRARQLVFSNDNLAAQPPPP
        RS+GSPLDL NLPEDYIRD KQIIED+S+                                            ERETETLNRARQLVFSNDNLA Q  PP
Subjt:  RSEGSPLDLTNLPEDYIRDGKQIIEDSSS--------------------------------------------ERETETLNRARQLVFSNDNLAAQPPPP

Query:  PHLGCCHSMAPANYHTPGGGGGGGVGTDSTLPLRFPTRMFSGSSPSTLL-PQPPPPTLPPSHQPYLYSSPSRPSSFPSYYPPPQASINDYYVGHVLGNPS
        PHLGCCHSMAP +YHT    G GGVG+D TL LRFPTRMF GSSP+TLL P P PP  PP HQPYLYSSPSRPSSFPSYYPPPQASINDYYVGHVLGNP+
Subjt:  PHLGCCHSMAPANYHTPGGGGGGGVGTDSTLPLRFPTRMFSGSSPSTLL-PQPPPPTLPPSHQPYLYSSPSRPSSFPSYYPPPQASINDYYVGHVLGNPS

Query:  QCSHQTVNYG--SSSVESSSYTCIGAP
        QCSHQT+NYG  SSS+ESSSYTCIGAP
Subjt:  QCSHQTVNYG--SSSVESSSYTCIGAP

SwissProt top hits

e value

%identity

Alignment

Q6S591 Zinc finger protein JAGGED

2.2e-10

31.03

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Query:  RSEGSPLDLTNLPEDYIRDG-KQIIEDSSS--------------------------------------------ERETETLNRARQLVFSNDNLAAQPPP
        R E + LDL NLP+D+ +DG KQ +E+ SS                                            ERETETLN+ARQLV+ ND +   PP 
Subjt:  RSEGSPLDLTNLPEDYIRDG-KQIIEDSSS--------------------------------------------ERETETLNRARQLVFSNDNLAAQPPP

Query:  PPHLGCCHSMAPANYHTPGGGGGGGVGTDSTLPLRFPTRMFSGSSPSTLLPQPPPPTLPPSHQPYLYSSPSRPSSFPSYYPPPQASINDYYVG-------
            G  H+  P  Y +             + P+ +P     GSS + L+PQPP P  PP   PY YSS        + Y  P    NDYY+        
Subjt:  PPHLGCCHSMAPANYHTPGGGGGGGVGTDSTLPLRFPTRMFSGSSPSTLLPQPPPPTLPPSHQPYLYSSPSRPSSFPSYYPPPQASINDYYVG-------

Query:  HVLGNPSQCSHQTVNYGSSSVESSSYTCIGAP
         +  +P+  +  TV+Y + S     YTC+GAP
Subjt:  HVLGNPSQCSHQTVNYGSSSVESSSYTCIGAP

Q9LG97 Zinc finger protein STAMENLESS 1

1.8e-12

31.58

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Query:  RSEGSPLDLTNLPEDYIRDGKQIIEDSSS---------------------------------------------------ERETETLNRARQLVFSNDNL
        R EGSPLDL NLP+++   GKQ +E S++                                                   ERETETLNRARQLVF ND+L
Subjt:  RSEGSPLDLTNLPEDYIRDGKQIIEDSSS---------------------------------------------------ERETETLNRARQLVFSNDNL

Query:  AAQPPP----PPHLGCCHSMAPANYHTPGGGG--GGGVGTDSTLPLRFPTRMFSGSSPSTLLPQPPPPTLPPSHQPYLYSSPSRPS-----SFPSYYPPP
        AA          ++G   + AP      GGGG  GGGVG D  +PLR             + P+  PP  PP H  YLY++ + PS     S+P+ YP P
Subjt:  AAQPPP----PPHLGCCHSMAPANYHTPGGGG--GGGVGTDSTLPLRFPTRMFSGSSPSTLLPQPPPPTLPPSHQPYLYSSPSRPS-----SFPSYYPPP

Query:  -----QASINDYYVGHVLGNPSQCSHQTVNYGSSSVESSSYTCIGAP
              A++ DY +GH +      +   +         +S++C GAP
Subjt:  -----QASINDYYVGHVLGNPSQCSHQTVNYGSSSVESSSYTCIGAP

Arabidopsis top hits

e value

%identity

Alignment

AT1G68480.1 C2H2 and C2HC zinc fingers superfamily protein

1.5e-11

31.03

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Query:  RSEGSPLDLTNLPEDYIRDG-KQIIEDSSS--------------------------------------------ERETETLNRARQLVFSNDNLAAQPPP
        R E + LDL NLP+D+ +DG KQ +E+ SS                                            ERETETLN+ARQLV+ ND +   PP 
Subjt:  RSEGSPLDLTNLPEDYIRDG-KQIIEDSSS--------------------------------------------ERETETLNRARQLVFSNDNLAAQPPP

Query:  PPHLGCCHSMAPANYHTPGGGGGGGVGTDSTLPLRFPTRMFSGSSPSTLLPQPPPPTLPPSHQPYLYSSPSRPSSFPSYYPPPQASINDYYVG-------
            G  H+  P  Y +             + P+ +P     GSS + L+PQPP P  PP   PY YSS        + Y  P    NDYY+        
Subjt:  PPHLGCCHSMAPANYHTPGGGGGGGVGTDSTLPLRFPTRMFSGSSPSTLLPQPPPPTLPPSHQPYLYSSPSRPSSFPSYYPPPQASINDYYVG-------

Query:  HVLGNPSQCSHQTVNYGSSSVESSSYTCIGAP
         +  +P+  +  TV+Y + S     YTC+GAP
Subjt:  HVLGNPSQCSHQTVNYGSSSVESSSYTCIGAP

Sequences

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CDS sequence

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ATGGGTAACTCAAATCTAACATCGAAATATAATGGGCGATCCGAGGGGAGCCCATTAGACCTCACCAACTTACCTGAAGATTATATCAGAGATGGGAAACAGATTATTGA
AGATAGCTCTAGTGAGAGAGAGACAGAGACACTGAATCGAGCTCGTCAGCTTGTTTTCAGTAACGATAACCTCGCCGCCCAACCACCTCCTCCTCCTCATTTAGGGTGCT
GCCATTCAATGGCACCGGCAAACTACCACACTCCCGGTGGCGGAGGCGGGGGCGGCGTAGGAACTGATTCAACCCTGCCTCTTAGATTCCCAACGAGAATGTTCTCCGGG
TCCTCCCCAAGCACACTTTTGCCGCAGCCGCCGCCACCAACGCTACCTCCGTCGCACCAGCCATATCTATACAGCTCGCCGTCGCGGCCTTCGAGTTTCCCTTCCTATTA
TCCTCCTCCACAAGCCTCCATCAACGACTACTACGTGGGGCATGTGTTGGGGAACCCTTCACAATGCAGTCATCAGACAGTGAACTACGGTTCCAGCTCGGTGGAGTCAA
GTAGCTACACTTGCATCGGAGCTCCGGAGCAAACTGTGAAACAAGAGATTGATGGGACAAGAAGTTAG

mRNA sequence

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Protein sequence

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MGNSNLTSKYNGRSEGSPLDLTNLPEDYIRDGKQIIEDSSSERETETLNRARQLVFSNDNLAAQPPPPPHLGCCHSMAPANYHTPGGGGGGGVGTDSTLPLRFPTRMFSG
SSPSTLLPQPPPPTLPPSHQPYLYSSPSRPSSFPSYYPPPQASINDYYVGHVLGNPSQCSHQTVNYGSSSVESSSYTCIGAPEQTVKQEIDGTRS

HG10009927 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome