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HG10009949 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10009949
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionDBD_Tnp_Mut domain-containing protein
Genome locationChr06:15244794..15246908
RNA-Seq ExpressionHG10009949
SyntenyHG10009949
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059897.1 protein FAR1-RELATED SEQUENCE 4-like [Cucumis melo var. makuwa]1.5e-1559.26Show/hide
Query:  MVKLPIVVFHSGQWNDRQCYVDYKTIGVLVDEAMRFDPFVNFIQKETQLH---SSIELSVLLDLCSTGVQHVVKILEDKDV
        M+KLPIVVFHSGQW+D   Y++YKT GVLVDE M F+ FV+ I +E       SSI+LS+LLD   T +Q VV+I EDKDV
Subjt:  MVKLPIVVFHSGQWNDRQCYVDYKTIGVLVDEAMRFDPFVNFIQKETQLH---SSIELSVLLDLCSTGVQHVVKILEDKDV

KAA0062637.1 uncharacterized protein E6C27_scaffold79G001490 [Cucumis melo var. makuwa]7.3e-1864.56Show/hide
Query:  MVKLPIVVFHSGQWNDRQCYVDYKTIGVLVDEAM-RFDPFVNFIQKETQLHSSIELSVLLDLCSTGVQHVVKILEDKDV
        MVKL ++VFHSGQW+++Q YVDYKT  VLVDE +  FD FVN I+ E Q+ S IELSVLL + S GVQHV+KI+E+KDV
Subjt:  MVKLPIVVFHSGQWNDRQCYVDYKTIGVLVDEAM-RFDPFVNFIQKETQLHSSIELSVLLDLCSTGVQHVVKILEDKDV

KAA0066702.1 uncharacterized protein E6C27_scaffold271G00350 [Cucumis melo var. makuwa]8.9e-1659.26Show/hide
Query:  MVKLPIVVFHSGQWNDRQCYVDYKTIGVLVDEAMRFDPFVNFIQKETQLH---SSIELSVLLDLCSTGVQHVVKILEDKDV
        M+KLPIVVFHSGQW+D   Y++YKT GVLVDE M F+ FV+ I +E +     SSI+LS+LLD   T +Q+VV+I EDKDV
Subjt:  MVKLPIVVFHSGQWNDRQCYVDYKTIGVLVDEAMRFDPFVNFIQKETQLH---SSIELSVLLDLCSTGVQHVVKILEDKDV

TYJ96591.1 uncharacterized protein E5676_scaffold1278G00090 [Cucumis melo var. makuwa]3.6e-1763.29Show/hide
Query:  MVKLPIVVFHSGQWNDRQCYVDYKTIGVLVDEAM-RFDPFVNFIQKETQLHSSIELSVLLDLCSTGVQHVVKILEDKDV
        MVKL ++VFHSGQW+++Q YVDYKT  VLVDE +  FD FVN I+ E Q+ S IELSVLL + S  VQHV+KI+E+KDV
Subjt:  MVKLPIVVFHSGQWNDRQCYVDYKTIGVLVDEAM-RFDPFVNFIQKETQLHSSIELSVLLDLCSTGVQHVVKILEDKDV

TYK27852.1 Mutator-like transposase [Cucumis melo var. makuwa]1.1e-1660.49Show/hide
Query:  MVKLPIVVFHSGQWNDRQCYVDYKTIGVLVDEAMRFDPFVNFIQKETQLH---SSIELSVLLDLCSTGVQHVVKILEDKDV
        M+KLPIVVFHSGQW+D   Y++YKTIGVLVDE M F+ FV+ I +E +     SSI+LS+LLD   T +Q+VV+I EDKDV
Subjt:  MVKLPIVVFHSGQWNDRQCYVDYKTIGVLVDEAMRFDPFVNFIQKETQLH---SSIELSVLLDLCSTGVQHVVKILEDKDV

TrEMBL top hitse value%identityAlignment
A0A5A7T3G5 Protein FAR1-RELATED SEQUENCE 4-like7.4e-1659.26Show/hide
Query:  MVKLPIVVFHSGQWNDRQCYVDYKTIGVLVDEAMRFDPFVNFIQKETQLH---SSIELSVLLDLCSTGVQHVVKILEDKDV
        M+KLPIVVFHSGQW+D   Y++YKT GVLVDE M F+ FV+ I +E       SSI+LS+LLD   T +Q VV+I EDKDV
Subjt:  MVKLPIVVFHSGQWNDRQCYVDYKTIGVLVDEAMRFDPFVNFIQKETQLH---SSIELSVLLDLCSTGVQHVVKILEDKDV

A0A5A7V6N4 SWIM-type domain-containing protein3.5e-1864.56Show/hide
Query:  MVKLPIVVFHSGQWNDRQCYVDYKTIGVLVDEAM-RFDPFVNFIQKETQLHSSIELSVLLDLCSTGVQHVVKILEDKDV
        MVKL ++VFHSGQW+++Q YVDYKT  VLVDE +  FD FVN I+ E Q+ S IELSVLL + S GVQHV+KI+E+KDV
Subjt:  MVKLPIVVFHSGQWNDRQCYVDYKTIGVLVDEAM-RFDPFVNFIQKETQLHSSIELSVLLDLCSTGVQHVVKILEDKDV

A0A5A7VEB2 DBD_Tnp_Mut domain-containing protein4.3e-1659.26Show/hide
Query:  MVKLPIVVFHSGQWNDRQCYVDYKTIGVLVDEAMRFDPFVNFIQKETQLH---SSIELSVLLDLCSTGVQHVVKILEDKDV
        M+KLPIVVFHSGQW+D   Y++YKT GVLVDE M F+ FV+ I +E +     SSI+LS+LLD   T +Q+VV+I EDKDV
Subjt:  MVKLPIVVFHSGQWNDRQCYVDYKTIGVLVDEAMRFDPFVNFIQKETQLH---SSIELSVLLDLCSTGVQHVVKILEDKDV

A0A5D3BD68 SWIM-type domain-containing protein1.8e-1763.29Show/hide
Query:  MVKLPIVVFHSGQWNDRQCYVDYKTIGVLVDEAM-RFDPFVNFIQKETQLHSSIELSVLLDLCSTGVQHVVKILEDKDV
        MVKL ++VFHSGQW+++Q YVDYKT  VLVDE +  FD FVN I+ E Q+ S IELSVLL + S  VQHV+KI+E+KDV
Subjt:  MVKLPIVVFHSGQWNDRQCYVDYKTIGVLVDEAM-RFDPFVNFIQKETQLHSSIELSVLLDLCSTGVQHVVKILEDKDV

A0A5D3DWG1 Mutator-like transposase5.1e-1760.49Show/hide
Query:  MVKLPIVVFHSGQWNDRQCYVDYKTIGVLVDEAMRFDPFVNFIQKETQLH---SSIELSVLLDLCSTGVQHVVKILEDKDV
        M+KLPIVVFHSGQW+D   Y++YKTIGVLVDE M F+ FV+ I +E +     SSI+LS+LLD   T +Q+VV+I EDKDV
Subjt:  MVKLPIVVFHSGQWNDRQCYVDYKTIGVLVDEAMRFDPFVNFIQKETQLH---SSIELSVLLDLCSTGVQHVVKILEDKDV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGTCAGGGTTGGCGGAGTGGTAGCTGTCGCAGTGCCGCAGGTGGTAGTTGTCGAAGTTAGTTGTTGCATGTGGTCGTCAAAGTTGGCCATCGAAGGTGGTTGTCA
AAGTTGGTTGCTAGAATTGAGCAATGAGGCATCGGTGGTGATGAGGGTTGAGTGCACTCATTTTGCAGTTATGGTTAAACTTCCAATAGTTGTTTTCCATAGTGGTCAAT
GGAATGATCGACAGTGCTATGTAGATTACAAAACTATTGGTGTTTTGGTTGACGAGGCGATGCGTTTTGATCCTTTTGTTAACTTCATACAAAAGGAAACTCAACTTCAT
TCATCTATTGAACTTTCAGTTTTATTGGATTTATGTAGTACTGGGGTTCAACATGTTGTCAAGATTCTTGAAGATAAAGATGTATGTGATATTTATTTGATTGTCATGTG
A
mRNA sequenceShow/hide mRNA sequence
ATGGTCGTCAGGGTTGGCGGAGTGGTAGCTGTCGCAGTGCCGCAGGTGGTAGTTGTCGAAGTTAGTTGTTGCATGTGGTCGTCAAAGTTGGCCATCGAAGGTGGTTGTCA
AAGTTGGTTGCTAGAATTGAGCAATGAGGCATCGGTGGTGATGAGGGTTGAGTGCACTCATTTTGCAGTTATGGTTAAACTTCCAATAGTTGTTTTCCATAGTGGTCAAT
GGAATGATCGACAGTGCTATGTAGATTACAAAACTATTGGTGTTTTGGTTGACGAGGCGATGCGTTTTGATCCTTTTGTTAACTTCATACAAAAGGAAACTCAACTTCAT
TCATCTATTGAACTTTCAGTTTTATTGGATTTATGTAGTACTGGGGTTCAACATGTTGTCAAGATTCTTGAAGATAAAGATGTATGTGATATTTATTTGATTGTCATGTG
A
Protein sequenceShow/hide protein sequence
MVVRVGGVVAVAVPQVVVVEVSCCMWSSKLAIEGGCQSWLLELSNEASVVMRVECTHFAVMVKLPIVVFHSGQWNDRQCYVDYKTIGVLVDEAMRFDPFVNFIQKETQLH
SSIELSVLLDLCSTGVQHVVKILEDKDVCDIYLIVM