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HG10009955 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10009955
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionGag/pol polyprotein-maize retrotransposon Hopscotch
Genome locationChr06:15383391..15383876
RNA-Seq ExpressionHG10009955
SyntenyHG10009955
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0044237 - cellular metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0071704 - organic substance metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652677.1 hypothetical protein Csa_014062 [Cucumis sativus]1.9e-1951Show/hide
Query:  INTEIVDFTTSKEVWQALDCLFSVTSCARVNQLRAVLQTTRKGTVGMAEYLSLMKQISESMKLAGSPVSLDDLISYAIVGLDAEYLPITCTIEGKATLKW
        + +E+V+   S+E+W AL+ L+  TS +    +  +LQ TRKGT+ M EYLS+MKQ  E+M+LAGSP+S +DL SY +VGLD EY+PI C IEGK +  W
Subjt:  INTEIVDFTTSKEVWQALDCLFSVTSCARVNQLRAVLQTTRKGTVGMAEYLSLMKQISESMKLAGSPVSLDDLISYAIVGLDAEYLPITCTIEGKATLKW

XP_022142770.1 uncharacterized protein LOC111012809 [Momordica charantia]6.6e-2043.85Show/hide
Query:  MTLAINTEIVDFTTSKEVWQALDCLFSVTSCARVNQLRAVLQTTRKGTVGMAEYLSLMKQISESMKLAGSPVSLDDLISYAIVGLDAEYLPITCTIEGKA
        M+  I  +++   TS++VW+AL+ L+   + AR+NQL+  LQTTRK  + M++YLS MKQ+++ + LAG P+S   L+S  + GL+AEYL I C I  K 
Subjt:  MTLAINTEIVDFTTSKEVWQALDCLFSVTSCARVNQLRAVLQTTRKGTVGMAEYLSLMKQISESMKLAGSPVSLDDLISYAIVGLDAEYLPITCTIEGKA

Query:  TLKWLYFFSALTTFENNLIRLNVVRTNIVS
         + W    + L TFEN LI LN V    VS
Subjt:  TLKWLYFFSALTTFENNLIRLNVVRTNIVS

XP_022143579.1 ankyrin repeat-containing protein NPR4-like [Momordica charantia]2.5e-1956Show/hide
Query:  MTLAINTEIVDFTTSKEVWQALDCLFSVTSCARVNQLRAVLQTTRKGTVGMAEYLSLMKQISESMKLAGSPVSLDDLISYAIVGLDAEYLPITCTIEGKA
        MT +I  ++V+  TS EVW AL+ LF  TS AR+NQLR  LQ T+KG + M  YL+ MKQ SE +KLAG PV+L  L S  + G +AEYLPI CTIE KA
Subjt:  MTLAINTEIVDFTTSKEVWQALDCLFSVTSCARVNQLRAVLQTTRKGTVGMAEYLSLMKQISESMKLAGSPVSLDDLISYAIVGLDAEYLPITCTIEGKA

XP_022157748.1 uncharacterized protein LOC111024384 isoform X1 [Momordica charantia]2.0e-2956.35Show/hide
Query:  MTLAINTEIVDFTTSKEVWQALDCLFSVTSCARVNQLRAVLQTTRKGTVGMAEYLSLMKQISESMKLAGSPVSLDDLISYAIVGLDAEYLPITCTIEGKA
        MT +I  ++VDF +S+EVW+AL+ L+  TS AR+NQLR VLQ T+K ++ M+EYL LMKQ SES+KLAG PV+ + L+S  + GL+AEYLPI C IEGK 
Subjt:  MTLAINTEIVDFTTSKEVWQALDCLFSVTSCARVNQLRAVLQTTRKGTVGMAEYLSLMKQISESMKLAGSPVSLDDLISYAIVGLDAEYLPITCTIEGKA

Query:  TLKWLYFFSALTTFENNLIRLNVVRT
        +  W   F+ L TFEN L+RLN+V T
Subjt:  TLKWLYFFSALTTFENNLIRLNVVRT

XP_022157750.1 uncharacterized protein LOC111024384 isoform X2 [Momordica charantia]2.0e-2956.35Show/hide
Query:  MTLAINTEIVDFTTSKEVWQALDCLFSVTSCARVNQLRAVLQTTRKGTVGMAEYLSLMKQISESMKLAGSPVSLDDLISYAIVGLDAEYLPITCTIEGKA
        MT +I  ++VDF +S+EVW+AL+ L+  TS AR+NQLR VLQ T+K ++ M+EYL LMKQ SES+KLAG PV+ + L+S  + GL+AEYLPI C IEGK 
Subjt:  MTLAINTEIVDFTTSKEVWQALDCLFSVTSCARVNQLRAVLQTTRKGTVGMAEYLSLMKQISESMKLAGSPVSLDDLISYAIVGLDAEYLPITCTIEGKA

Query:  TLKWLYFFSALTTFENNLIRLNVVRT
        +  W   F+ L TFEN L+RLN+V T
Subjt:  TLKWLYFFSALTTFENNLIRLNVVRT

TrEMBL top hitse value%identityAlignment
A0A0A0LUB0 Uncharacterized protein9.3e-2051Show/hide
Query:  INTEIVDFTTSKEVWQALDCLFSVTSCARVNQLRAVLQTTRKGTVGMAEYLSLMKQISESMKLAGSPVSLDDLISYAIVGLDAEYLPITCTIEGKATLKW
        + +E+V+   S+E+W AL+ L+  TS +    +  +LQ TRKGT+ M EYLS+MKQ  E+M+LAGSP+S +DL SY +VGLD EY+PI C IEGK +  W
Subjt:  INTEIVDFTTSKEVWQALDCLFSVTSCARVNQLRAVLQTTRKGTVGMAEYLSLMKQISESMKLAGSPVSLDDLISYAIVGLDAEYLPITCTIEGKATLKW

A0A6J1CLV9 uncharacterized protein LOC1110128093.2e-2043.85Show/hide
Query:  MTLAINTEIVDFTTSKEVWQALDCLFSVTSCARVNQLRAVLQTTRKGTVGMAEYLSLMKQISESMKLAGSPVSLDDLISYAIVGLDAEYLPITCTIEGKA
        M+  I  +++   TS++VW+AL+ L+   + AR+NQL+  LQTTRK  + M++YLS MKQ+++ + LAG P+S   L+S  + GL+AEYL I C I  K 
Subjt:  MTLAINTEIVDFTTSKEVWQALDCLFSVTSCARVNQLRAVLQTTRKGTVGMAEYLSLMKQISESMKLAGSPVSLDDLISYAIVGLDAEYLPITCTIEGKA

Query:  TLKWLYFFSALTTFENNLIRLNVVRTNIVS
         + W    + L TFEN LI LN V    VS
Subjt:  TLKWLYFFSALTTFENNLIRLNVVRTNIVS

A0A6J1CPQ7 ankyrin repeat-containing protein NPR4-like1.2e-1956Show/hide
Query:  MTLAINTEIVDFTTSKEVWQALDCLFSVTSCARVNQLRAVLQTTRKGTVGMAEYLSLMKQISESMKLAGSPVSLDDLISYAIVGLDAEYLPITCTIEGKA
        MT +I  ++V+  TS EVW AL+ LF  TS AR+NQLR  LQ T+KG + M  YL+ MKQ SE +KLAG PV+L  L S  + G +AEYLPI CTIE KA
Subjt:  MTLAINTEIVDFTTSKEVWQALDCLFSVTSCARVNQLRAVLQTTRKGTVGMAEYLSLMKQISESMKLAGSPVSLDDLISYAIVGLDAEYLPITCTIEGKA

A0A6J1DTZ7 uncharacterized protein LOC111024384 isoform X29.9e-3056.35Show/hide
Query:  MTLAINTEIVDFTTSKEVWQALDCLFSVTSCARVNQLRAVLQTTRKGTVGMAEYLSLMKQISESMKLAGSPVSLDDLISYAIVGLDAEYLPITCTIEGKA
        MT +I  ++VDF +S+EVW+AL+ L+  TS AR+NQLR VLQ T+K ++ M+EYL LMKQ SES+KLAG PV+ + L+S  + GL+AEYLPI C IEGK 
Subjt:  MTLAINTEIVDFTTSKEVWQALDCLFSVTSCARVNQLRAVLQTTRKGTVGMAEYLSLMKQISESMKLAGSPVSLDDLISYAIVGLDAEYLPITCTIEGKA

Query:  TLKWLYFFSALTTFENNLIRLNVVRT
        +  W   F+ L TFEN L+RLN+V T
Subjt:  TLKWLYFFSALTTFENNLIRLNVVRT

A0A6J1DU77 uncharacterized protein LOC111024384 isoform X19.9e-3056.35Show/hide
Query:  MTLAINTEIVDFTTSKEVWQALDCLFSVTSCARVNQLRAVLQTTRKGTVGMAEYLSLMKQISESMKLAGSPVSLDDLISYAIVGLDAEYLPITCTIEGKA
        MT +I  ++VDF +S+EVW+AL+ L+  TS AR+NQLR VLQ T+K ++ M+EYL LMKQ SES+KLAG PV+ + L+S  + GL+AEYLPI C IEGK 
Subjt:  MTLAINTEIVDFTTSKEVWQALDCLFSVTSCARVNQLRAVLQTTRKGTVGMAEYLSLMKQISESMKLAGSPVSLDDLISYAIVGLDAEYLPITCTIEGKA

Query:  TLKWLYFFSALTTFENNLIRLNVVRT
        +  W   F+ L TFEN L+RLN+V T
Subjt:  TLKWLYFFSALTTFENNLIRLNVVRT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGTTAGCCATTAACACAGAAATTGTTGATTTCACAACATCGAAAGAAGTTTGGCAAGCTCTAGATTGTCTATTTAGTGTAACAAGTTGCGCACGCGTCAACCAACT
AAGAGCAGTTCTTCAAACCACAAGAAAGGGAACTGTAGGTATGGCAGAATACTTGTCTCTGATGAAACAGATAAGTGAGAGCATGAAATTGGCTGGCTCACCAGTATCTC
TCGATGATCTAATTTCTTATGCCATAGTCGGTCTTGATGCTGAGTACCTTCCTATTACTTGTACTATTGAAGGTAAAGCCACTCTAAAATGGCTATATTTCTTTTCAGCT
TTAACCACTTTTGAGAATAATCTTATTCGTCTCAATGTTGTGAGAACTAATATTGTTTCTAGAGTGGTAGTGTTAATTTTGTCTATTATAATCATGGGAATGCTCCTCAA
GGTGGTCAAAATCGATCATCAACCAACAATAGTTCTGGAAACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGTTAGCCATTAACACAGAAATTGTTGATTTCACAACATCGAAAGAAGTTTGGCAAGCTCTAGATTGTCTATTTAGTGTAACAAGTTGCGCACGCGTCAACCAACT
AAGAGCAGTTCTTCAAACCACAAGAAAGGGAACTGTAGGTATGGCAGAATACTTGTCTCTGATGAAACAGATAAGTGAGAGCATGAAATTGGCTGGCTCACCAGTATCTC
TCGATGATCTAATTTCTTATGCCATAGTCGGTCTTGATGCTGAGTACCTTCCTATTACTTGTACTATTGAAGGTAAAGCCACTCTAAAATGGCTATATTTCTTTTCAGCT
TTAACCACTTTTGAGAATAATCTTATTCGTCTCAATGTTGTGAGAACTAATATTGTTTCTAGAGTGGTAGTGTTAATTTTGTCTATTATAATCATGGGAATGCTCCTCAA
GGTGGTCAAAATCGATCATCAACCAACAATAGTTCTGGAAACTTAA
Protein sequenceShow/hide protein sequence
MTLAINTEIVDFTTSKEVWQALDCLFSVTSCARVNQLRAVLQTTRKGTVGMAEYLSLMKQISESMKLAGSPVSLDDLISYAIVGLDAEYLPITCTIEGKATLKWLYFFSA
LTTFENNLIRLNVVRTNIVSRVVVLILSIIIMGMLLKVVKIDHQPTIVLET