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HG10009964 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10009964
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr06:15638662..15639720
RNA-Seq ExpressionHG10009964
SyntenyHG10009964
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038875107.1 nucleophosmin-like [Benincasa hispida]1.8e-0461.11Show/hide
Query:  QNKVVEKTLKKSPKKYRPKVAARDELVVEKIPKRRTKPTKKILENAKNPKKEKK
        + KV+EKTLK SP KYRPKV   + +   K PKR+ KPT KILENAK  KK+KK
Subjt:  QNKVVEKTLKKSPKKYRPKVAARDELVVEKIPKRRTKPTKKILENAKNPKKEKK

XP_038880505.1 glutamic acid-rich protein-like [Benincasa hispida]2.8e-0564.81Show/hide
Query:  QNKVVEKTLKKSPKKYRPKVAARDELVVEKIPKRRTKPTKKILENAKNPKKEKK
        +  V+EKTLKKSPKKYRPKV     +   K PKR+ KPTKKILENAK  KK+KK
Subjt:  QNKVVEKTLKKSPKKYRPKVAARDELVVEKIPKRRTKPTKKILENAKNPKKEKK

XP_038885971.1 chromatin modification-related protein EAF7-like [Benincasa hispida]4.4e-0670.59Show/hide
Query:  VVEKTLKKSPKKYRPKVAARDELVVEKIPKRRTKPTKKILENAKNPKKEKK
        V+EKTLKKSPKKYRPKV   + +   K PKR+TKPTKKILENAK  KK+KK
Subjt:  VVEKTLKKSPKKYRPKVAARDELVVEKIPKRRTKPTKKILENAKNPKKEKK

XP_038891747.1 pescadillo homolog [Benincasa hispida]1.8e-0462.96Show/hide
Query:  QNKVVEKTLKKSPKKYRPKVAARDELVVEKIPKRRTKPTKKILENAKNPKKEKK
        +  V+EKTLKKS KKYRPKV   + +   K PKR+ KPTKKILENAK  KK+KK
Subjt:  QNKVVEKTLKKSPKKYRPKVAARDELVVEKIPKRRTKPTKKILENAKNPKKEKK

XP_038896339.1 myb-like protein X [Benincasa hispida]8.8e-0762.71Show/hide
Query:  QNKVVEKTLKKSPKKYRPKVAAR--DELVVEKIPKRRTKPTKKILENAKNPKKEKKCIL
        + KV E TL+KSPKKYRPKVA +  DE VVE  PKR+T+ TKKILEN +N K++KK +L
Subjt:  QNKVVEKTLKKSPKKYRPKVAAR--DELVVEKIPKRRTKPTKKILENAKNPKKEKKCIL

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAACATAGTTAGGAACTTCTTCTTCAAGACCAACACAAAAATTGTAAGGAGAGAGATTCAATTTGCCTTTAATGTTTTAGGCTCTGATGCCGCTATACCCATTGA
TCTAAGAGTCAAACTCACCAACTTGTATTTCTTAAAGAGCTTCCTAATTCCTACACAAGGACAAAATAAAGTTGTTGAAAAGACTCTTAAAAAGAGTCCAAAAAAGTATA
GACCAAAGGTTGCAGCTAGGGACGAGCTTGTTGTTGAGAAGATACCGAAGAGACGAACAAAACCAACCAAGAAAATTTTGGAGAATGCAAAAAATCCAAAAAAGGAAAAA
AAATGCATTCTCCAAGGTTTTTCCAAGCAAAAATACAAGGCATTCTCCAAGGTAGAAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGACAACATAGTTAGGAACTTCTTCTTCAAGACCAACACAAAAATTGTAAGGAGAGAGATTCAATTTGCCTTTAATGTTTTAGGCTCTGATGCCGCTATACCCATTGA
TCTAAGAGTCAAACTCACCAACTTGTATTTCTTAAAGAGCTTCCTAATTCCTACACAAGGACAAAATAAAGTTGTTGAAAAGACTCTTAAAAAGAGTCCAAAAAAGTATA
GACCAAAGGTTGCAGCTAGGGACGAGCTTGTTGTTGAGAAGATACCGAAGAGACGAACAAAACCAACCAAGAAAATTTTGGAGAATGCAAAAAATCCAAAAAAGGAAAAA
AAATGCATTCTCCAAGGTTTTTCCAAGCAAAAATACAAGGCATTCTCCAAGGTAGAAGGATGA
Protein sequenceShow/hide protein sequence
MDNIVRNFFFKTNTKIVRREIQFAFNVLGSDAAIPIDLRVKLTNLYFLKSFLIPTQGQNKVVEKTLKKSPKKYRPKVAARDELVVEKIPKRRTKPTKKILENAKNPKKEK
KCILQGFSKQKYKAFSKVEG