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HG10010022 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10010022
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr06:17127062..17127328
RNA-Seq ExpressionHG10010022
SyntenyHG10010022
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON37662.1 LOW QUALITY PROTEIN: hypothetical protein TorRG33x02_346970 [Trema orientale]8.3e-0946.34Show/hide
Query:  NEQGEIETANYVDRGQF--RGQHFS----THYHPNLRNHEKFSYPNNKNVLQAPQGFNGTKNVNTSSLEDLMIDFVKELRSR
        N+ G++E  NY++   F  RG + S    THYHP LRNHE FSY NN+NVLQ P GFN        SL+D++  F+ E + R
Subjt:  NEQGEIETANYVDRGQF--RGQHFS----THYHPNLRNHEKFSYPNNKNVLQAPQGFNGTKNVNTSSLEDLMIDFVKELRSR

WP_217833148.1 hypothetical protein, partial [Synechococcus sp. PCC 7002]7.5e-1060.66Show/hide
Query:  QHFSTHYHPNLRNHEKFSYPNNKNVLQAPQGFNGTKNVNT---SSLEDLMIDFVKELRSRT
        Q   THYHPNLRNHE FSY NN+NVLQ P G +     +T   S+LEDLMI+F+KE R RT
Subjt:  QHFSTHYHPNLRNHEKFSYPNNKNVLQAPQGFNGTKNVNT---SSLEDLMIDFVKELRSRT

WP_217833153.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]2.9e-2274.03Show/hide
Query:  GEIETANYVDRGQFRG---QHFSTHYHPNLRNHEKFSYPNNKNVLQAPQGFNGTKNVNTSSLEDLMIDFVKELRSRT
        G+ ETANYVDRG +R    Q   THYHPNLRNHE FSY NNKNVLQAPQGFNG  N  TSSLED+M+DFVKE RSRT
Subjt:  GEIETANYVDRGQFRG---QHFSTHYHPNLRNHEKFSYPNNKNVLQAPQGFNGTKNVNTSSLEDLMIDFVKELRSRT

XP_022868848.1 uncharacterized protein LOC111388394 [Olea europaea var. sylvestris]6.4e-0946.99Show/hide
Query:  ASQNEQGEI--ETANYVDRGQF--RGQHFSTHYHPNLRNHEKFSYPNNKNVLQAPQGFNGTKNVNTSSLEDLMIDFVKELRSR
        +S N++ EI  E A Y+D   F  RG + + HYHP LRNHE  SY NN+N LQ P GFN   +     LED++  F+ E RSR
Subjt:  ASQNEQGEI--ETANYVDRGQF--RGQHFSTHYHPNLRNHEKFSYPNNKNVLQAPQGFNGTKNVNTSSLEDLMIDFVKELRSR

XP_030969898.1 uncharacterized protein LOC115990189 [Quercus lobata]1.4e-0848.1Show/hide
Query:  ASQNEQGEIETANYVDRGQFRGQHFSTHYHPNLRNHEKFSYPNNKNVLQAPQGFNGTKNVNTSSLEDLMIDFVKELRSR
        ASQ +   I   NY     +RG     +YHP LRNHE FSY N KNVLQ P GF+   +    SLED MI FV+E ++R
Subjt:  ASQNEQGEIETANYVDRGQFRGQHFSTHYHPNLRNHEKFSYPNNKNVLQAPQGFNGTKNVNTSSLEDLMIDFVKELRSR

TrEMBL top hitse value%identityAlignment
A0A2I4FCJ6 uncharacterized protein LOC1089975161.4e-0643.37Show/hide
Query:  ASQNEQGEIETANYVDRGQFRGQHFSTHYHPNLRNHEKFSYPNNKNVLQAPQGFNGTKNVNTSSLEDLMIDFVKELRSRTWRT
        ASQ +   I   NY     +RG     +YH  L+NHE  SY N KNVLQ P GF+  ++    SLED MI FV+E  +R  +T
Subjt:  ASQNEQGEIETANYVDRGQFRGQHFSTHYHPNLRNHEKFSYPNNKNVLQAPQGFNGTKNVNTSSLEDLMIDFVKELRSRTWRT

A0A2P5AMA4 Uncharacterized protein4.0e-0946.34Show/hide
Query:  NEQGEIETANYVDRGQF--RGQHFS----THYHPNLRNHEKFSYPNNKNVLQAPQGFNGTKNVNTSSLEDLMIDFVKELRSR
        N+ G++E  NY++   F  RG + S    THYHP LRNHE FSY NN+NVLQ P GFN        SL+D++  F+ E + R
Subjt:  NEQGEIETANYVDRGQF--RGQHFS----THYHPNLRNHEKFSYPNNKNVLQAPQGFNGTKNVNTSSLEDLMIDFVKELRSR

A0A2P5B1T0 Uncharacterized protein9.9e-0843.9Show/hide
Query:  NEQGEIETANYVDRGQF--RG----QHFSTHYHPNLRNHEKFSYPNNKNVLQAPQGFNGTKNVNTSSLEDLMIDFVKELRSR
        N+ G++   NY++   F  RG     +  THYHP L NHE FSY NN+NVLQ P G N +      SLED++  F+ E R R
Subjt:  NEQGEIETANYVDRGQF--RG----QHFSTHYHPNLRNHEKFSYPNNKNVLQAPQGFNGTKNVNTSSLEDLMIDFVKELRSR

A0A2P5B7D3 Uncharacterized protein (Fragment)9.9e-0843.9Show/hide
Query:  NEQGEIETANYVDRGQFRGQ------HFSTHYHPNLRNHEKFSYPNNKNVLQAPQGFNGTKNVNTSSLEDLMIDFVKELRSR
        N   ++E  NY++   F  Q      +  THYHP+LRNHE FSY NN+NVLQ P G N        SLED++  F+ E R R
Subjt:  NEQGEIETANYVDRGQFRGQ------HFSTHYHPNLRNHEKFSYPNNKNVLQAPQGFNGTKNVNTSSLEDLMIDFVKELRSR

A0A2P5BPI6 Uncharacterized protein8.4e-0756.6Show/hide
Query:  THYHPNLRNHEKFSYPNNKNVLQAPQGFNGTKNVNTSSLEDLMIDFVKELRSR
        THY+P LRNHE FSY N +NVLQ P GFN   +   SSLEDL+  F+ E R +
Subjt:  THYHPNLRNHEKFSYPNNKNVLQAPQGFNGTKNVNTSSLEDLMIDFVKELRSR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGTCAAAACGAGCAAGGTGAGATAGAGACGGCCAACTATGTAGATAGAGGACAATTTAGAGGCCAACATTTTTCCACTCATTACCATCCCAACTTGAGGAATCA
TGAAAAGTTCTCTTATCCTAACAACAAGAATGTGTTGCAAGCACCTCAAGGTTTCAATGGTACGAAAAATGTGAATACATCATCTTTAGAGGATTTAATGATTGATTTTG
TCAAAGAATTAAGGTCAAGGACTTGGAGAACTCGGTACAAACCATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGTCAAAACGAGCAAGGTGAGATAGAGACGGCCAACTATGTAGATAGAGGACAATTTAGAGGCCAACATTTTTCCACTCATTACCATCCCAACTTGAGGAATCA
TGAAAAGTTCTCTTATCCTAACAACAAGAATGTGTTGCAAGCACCTCAAGGTTTCAATGGTACGAAAAATGTGAATACATCATCTTTAGAGGATTTAATGATTGATTTTG
TCAAAGAATTAAGGTCAAGGACTTGGAGAACTCGGTACAAACCATAG
Protein sequenceShow/hide protein sequence
MASQNEQGEIETANYVDRGQFRGQHFSTHYHPNLRNHEKFSYPNNKNVLQAPQGFNGTKNVNTSSLEDLMIDFVKELRSRTWRTRYKP