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HG10010040 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10010040
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
Genome locationChr06:17432719..17433933
RNA-Seq ExpressionHG10010040
SyntenyHG10010040
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATGGAGAAGCATTTTGTGGGGTCATAAGCTATTCGCCCAGGGGTATCGATGACAGGTGGATAATGGTTTGTCCAACCAGATTGAGGTGGATCGTTGGCTCCCTAGG
CGAGGAAATGGTTTGGACTCTTCAAAATTATGTGATGTTTCATGGTGTGGATATTTCTATCTCTATGCTAGTGGATTTCATTCAAGGTTTAGCACCTCAGTTCTTGGGAC
CAATGAGATTGATGGTGGACGCAAATGGGGTTAGACAACAGGTAGTTGTCGCAGCGGATGTGACCCTCCCTCGATGGATACCTCCCGTCCTTAGGTCTTCTCTTTGTCTT
GTGATGCGAGATGGAGACAGGCACATTCGTGGCGCGTACGATACACTGTTGATGGTGTTTTGGGTTACAGCTTATGGGTTGAAAGCTATTGCCTGTAAGGGTCGACACTC
GATCATTATAGAGTCTGATAGTCTAACTGCGACGCGATTACTAAAGGAGGAGGAGGTCAATCTAACTACGGCAAGATCTTTTGTGGAGGAGATTTTGGAGGTTAGCAAGG
GTGAGAGTGGATGTCAATTTAAGCATATAAGTCGTTCCCAAAATCATGTGGCGGACTATTTGATTAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCATGGAGAAGCATTTTGTGGGGTCATAAGCTATTCGCCCAGGGGTATCGATGACAGGTGGATAATGGTTTGTCCAACCAGATTGAGGTGGATCGTTGGCTCCCTAGG
CGAGGAAATGGTTTGGACTCTTCAAAATTATGTGATGTTTCATGGTGTGGATATTTCTATCTCTATGCTAGTGGATTTCATTCAAGGTTTAGCACCTCAGTTCTTGGGAC
CAATGAGATTGATGGTGGACGCAAATGGGGTTAGACAACAGGTAGTTGTCGCAGCGGATGTGACCCTCCCTCGATGGATACCTCCCGTCCTTAGGTCTTCTCTTTGTCTT
GTGATGCGAGATGGAGACAGGCACATTCGTGGCGCGTACGATACACTGTTGATGGTGTTTTGGGTTACAGCTTATGGGTTGAAAGCTATTGCCTGTAAGGGTCGACACTC
GATCATTATAGAGTCTGATAGTCTAACTGCGACGCGATTACTAAAGGAGGAGGAGGTCAATCTAACTACGGCAAGATCTTTTGTGGAGGAGATTTTGGAGGTTAGCAAGG
GTGAGAGTGGATGTCAATTTAAGCATATAAGTCGTTCCCAAAATCATGTGGCGGACTATTTGATTAATTAG
Protein sequenceShow/hide protein sequence
MHGEAFCGVISYSPRGIDDRWIMVCPTRLRWIVGSLGEEMVWTLQNYVMFHGVDISISMLVDFIQGLAPQFLGPMRLMVDANGVRQQVVVAADVTLPRWIPPVLRSSLCL
VMRDGDRHIRGAYDTLLMVFWVTAYGLKAIACKGRHSIIIESDSLTATRLLKEEEVNLTTARSFVEEILEVSKGESGCQFKHISRSQNHVADYLIN