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HG10010052 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10010052
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionATP synthase subunit beta
Genome locationChr06:17580991..17581197
RNA-Seq ExpressionHG10010052
SyntenyHG10010052
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050839.1 putative chloroplast RF68 [Cucumis melo var. makuwa]6.4e-0988.89Show/hide
Query:  MIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQA
        MIYF GEVS SSPGWPSYAKEKNKRI++ASDSFMQA
Subjt:  MIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQA

KAG0447283.1 hypothetical protein HPP92_028386 [Vanilla planifolia]2.9e-0980.49Show/hide
Query:  MIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQAPLGSG
        MIYFTGEVSGSSPGWPS A+++ KRIEEA DSFM A LGSG
Subjt:  MIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQAPLGSG

KAG6773797.1 hypothetical protein POTOM_021122 [Populus tomentosa]3.7e-0468.29Show/hide
Query:  MIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQAPLGSG
        MIYFTGEV GSS GWPS AKE  K+I  A D F+ +PLGSG
Subjt:  MIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQAPLGSG

KAG6790056.1 hypothetical protein POTOM_006202 [Populus tomentosa]4.8e-0455.36Show/hide
Query:  MIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQAPL---GSGFLTRKNYFYQGR
        MI+FT +V  SS GWPS AKEKN RI+EASDSF+ APL   G   + R ++   GR
Subjt:  MIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQAPL---GSGFLTRKNYFYQGR

TYK08512.1 putative chloroplast RF68 [Cucumis melo var. makuwa]1.5e-1087.5Show/hide
Query:  MIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQAPLGS
        MIYF GEVS SSPGWPSYAKEKNKRI++ASDSFMQA LGS
Subjt:  MIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQAPLGS

TrEMBL top hitse value%identityAlignment
A0A445B9B0 Uncharacterized protein3.0e-0488.46Show/hide
Query:  MIYFTGEVSGSSPGWPSYAKEKNKRI
        MIYFTGEVSGSSPGWPS AKEKN+R+
Subjt:  MIYFTGEVSGSSPGWPSYAKEKNKRI

A0A5A7UBD6 Uncharacterized protein ycf683.1e-0988.89Show/hide
Query:  MIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQA
        MIYF GEVS SSPGWPSYAKEKNKRI++ASDSFMQA
Subjt:  MIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQA

A0A5D3CB41 Uncharacterized protein ycf687.4e-1187.5Show/hide
Query:  MIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQAPLGS
        MIYF GEVS SSPGWPSYAKEKNKRI++ASDSFMQA LGS
Subjt:  MIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQAPLGS

A0A5K1HF00 Uncharacterized protein3.0e-0470.73Show/hide
Query:  MIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQAPLGSG
        MIYFTGEVSGS    P+      KRIEEASDSFM APLGSG
Subjt:  MIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQAPLGSG

A0A6M8PB41 ATP synthase subunit beta6.7e-0477.78Show/hide
Query:  SGFLTRKNYFYQGRVHNFYSSCLCTCG
        +GF TRKNYFYQ  +HNFYSS LCTCG
Subjt:  SGFLTRKNYFYQGRVHNFYSSCLCTCG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTACTTCACGGGCGAGGTCTCTGGTTCAAGTCCAGGATGGCCCAGCTACGCCAAGGAAAAGAATAAAAGAATAGAAGAAGCATCTGACTCCTTCATGCAGGCCCC
ACTTGGCTCGGGGTTCCTTACAAGAAAGAATTACTTCTACCAAGGAAGGGTCCATAACTTCTATTCAAGCTGTTTATGTACCTGCGGTCTTGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGATTTACTTCACGGGCGAGGTCTCTGGTTCAAGTCCAGGATGGCCCAGCTACGCCAAGGAAAAGAATAAAAGAATAGAAGAAGCATCTGACTCCTTCATGCAGGCCCC
ACTTGGCTCGGGGTTCCTTACAAGAAAGAATTACTTCTACCAAGGAAGGGTCCATAACTTCTATTCAAGCTGTTTATGTACCTGCGGTCTTGGATAA
Protein sequenceShow/hide protein sequence
MIYFTGEVSGSSPGWPSYAKEKNKRIEEASDSFMQAPLGSGFLTRKNYFYQGRVHNFYSSCLCTCGLG