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HG10010054 (gene) of Bottle gourd (Hangzhou Gourd) v1 genome

Gene IDHG10010054
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPLASMODESMATA CALLOSE-BINDING PROTEIN 3
Genome locationChr06:17597167..17599990
RNA-Seq ExpressionHG10010054
SyntenyHG10010054
Gene Ontology termsGO:0009506 - plasmodesma (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR012946 - X8 domain
IPR044788 - Carbohydrate-binding X8 domain-containing protein, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651770.1 hypothetical protein Csa_006265 [Cucumis sativus]4.8e-5188.89Show/hide
Query:  MATLVLSH---SFLLFFFLIGTSAVDGAYWCVARSDATYESLQAALDYACATGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSAT
        MAT +LSH    F  FFFL GTS VDGAYWCVARSDATYESLQAALDYACATGA+CTPI+LNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSAT
Subjt:  MATLVLSH---SFLLFFFLIGTSAVDGAYWCVARSDATYESLQAALDYACATGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSAT

Query:  IAQSDPSYGSCVYPSSI
        IAQSDPSYGSCVYPSS+
Subjt:  IAQSDPSYGSCVYPSSI

KAG6574856.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 3, partial [Cucurbita argyrosperma subsp. sororia]1.8e-5088.89Show/hide
Query:  MATLVLSHSF--LLFFFLIGTSAVDGAYWCVARSDATYESLQAALDYACATGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATI
        MATLVLSHSF  LL  FL+ TSAVDGAYWCVARS+A+YE+LQ ALDYACATGADCTP+L NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATI
Subjt:  MATLVLSHSF--LLFFFLIGTSAVDGAYWCVARSDATYESLQAALDYACATGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATI

Query:  AQSDPSYGSCVYPSSIR
        AQ+DPSYGSCVYPSSIR
Subjt:  AQSDPSYGSCVYPSSIR

XP_004138961.2 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis sativus]4.8e-5188.89Show/hide
Query:  MATLVLSH---SFLLFFFLIGTSAVDGAYWCVARSDATYESLQAALDYACATGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSAT
        MAT +LSH    F  FFFL GTS VDGAYWCVARSDATYESLQAALDYACATGA+CTPI+LNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSAT
Subjt:  MATLVLSH---SFLLFFFLIGTSAVDGAYWCVARSDATYESLQAALDYACATGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSAT

Query:  IAQSDPSYGSCVYPSSI
        IAQSDPSYGSCVYPSS+
Subjt:  IAQSDPSYGSCVYPSSI

XP_008457240.1 PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Cucumis melo]8.2e-5189.92Show/hide
Query:  MATLVLSH--SFLLF---FFLIGTSAVDGAYWCVARSDATYESLQAALDYACATGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGS
        MAT + SH  SF LF   FFLIGTSAVDGAYWCVARSDATYESLQAA+DYACATGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDF GS
Subjt:  MATLVLSH--SFLLF---FFLIGTSAVDGAYWCVARSDATYESLQAALDYACATGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGS

Query:  ATIAQSDPSYGSCVYPSSI
        ATIAQSDPSYGSCVYPSS+
Subjt:  ATIAQSDPSYGSCVYPSSI

XP_038875835.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Benincasa hispida]1.2e-5496.46Show/hide
Query:  MATLVLSHSFLLFFFLIGTSAVDGAYWCVARSDATYESLQAALDYACATGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQ
        MATLV SHSFLLFFFLIGTSAVDGAYWCVARSDA+YE+LQAALDYACATGADC PILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQ
Subjt:  MATLVLSHSFLLFFFLIGTSAVDGAYWCVARSDATYESLQAALDYACATGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQ

Query:  SDPSYGSCVYPSS
        SDPSYGSCVYPSS
Subjt:  SDPSYGSCVYPSS

TrEMBL top hitse value%identityAlignment
A0A0A0LND4 X8 domain-containing protein2.3e-5188.89Show/hide
Query:  MATLVLSH---SFLLFFFLIGTSAVDGAYWCVARSDATYESLQAALDYACATGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSAT
        MAT +LSH    F  FFFL GTS VDGAYWCVARSDATYESLQAALDYACATGA+CTPI+LNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSAT
Subjt:  MATLVLSH---SFLLFFFLIGTSAVDGAYWCVARSDATYESLQAALDYACATGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSAT

Query:  IAQSDPSYGSCVYPSSI
        IAQSDPSYGSCVYPSS+
Subjt:  IAQSDPSYGSCVYPSSI

A0A1S3C4M3 PLASMODESMATA CALLOSE-BINDING PROTEIN 34.0e-5189.92Show/hide
Query:  MATLVLSH--SFLLF---FFLIGTSAVDGAYWCVARSDATYESLQAALDYACATGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGS
        MAT + SH  SF LF   FFLIGTSAVDGAYWCVARSDATYESLQAA+DYACATGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDF GS
Subjt:  MATLVLSH--SFLLF---FFLIGTSAVDGAYWCVARSDATYESLQAALDYACATGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGS

Query:  ATIAQSDPSYGSCVYPSSI
        ATIAQSDPSYGSCVYPSS+
Subjt:  ATIAQSDPSYGSCVYPSSI

A0A5A7SQ29 PLASMODESMATA CALLOSE-BINDING PROTEIN 32.5e-4584.03Show/hide
Query:  MATLVLSH--SFLLF---FFLIGTSAVDGAYWCVARSDATYESLQAALDYACATGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGS
        MAT + SH  SF LF   FFLIGTSAVDGAYWCVARSDATYESLQAA+DYACATGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDF GS
Subjt:  MATLVLSH--SFLLF---FFLIGTSAVDGAYWCVARSDATYESLQAALDYACATGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGS

Query:  ATIAQSDPSYGSCVYPSSI
        ATIAQSDPS     Y  S+
Subjt:  ATIAQSDPSYGSCVYPSSI

A0A6J1H812 PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like3.4e-5088.79Show/hide
Query:  MATLVLSHSF--LLFFFLIGTSAVDGAYWCVARSDATYESLQAALDYACATGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATI
        MATLVLSHSF  LL  FL+ TSAVDGAYWCVARS+A+YE+LQ ALDYACATGADCTP+L NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATI
Subjt:  MATLVLSHSF--LLFFFLIGTSAVDGAYWCVARSDATYESLQAALDYACATGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATI

Query:  AQSDPSYGSCVYPSSI
        AQ+DPSYGSCVYPSSI
Subjt:  AQSDPSYGSCVYPSSI

A0A6J1KVB1 PLASMODESMATA CALLOSE-BINDING PROTEIN 34.4e-5087.93Show/hide
Query:  MATLVLSHSF--LLFFFLIGTSAVDGAYWCVARSDATYESLQAALDYACATGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATI
        MATLVLSHSF  LL  FL+ TSAVDGAYWCVARS+A+YE+LQ ALDYACATGADCTP+L NGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSAT+
Subjt:  MATLVLSHSF--LLFFFLIGTSAVDGAYWCVARSDATYESLQAALDYACATGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATI

Query:  AQSDPSYGSCVYPSSI
        AQ+DPSYGSCVYPSSI
Subjt:  AQSDPSYGSCVYPSSI

SwissProt top hitse value%identityAlignment
Q84V39 Major pollen allergen Ole e 101.7e-1951.72Show/hide
Query:  WCVARSDATYESLQAALDYACA-TGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQSDPSYGSCVYPS
        WCV +++AT   LQ+ +DY C+ +G DC PI  NG CF PNT++AHASYA NS++Q K      CDF+G+  I  SDPS GSC + S
Subjt:  WCVARSDATYESLQAALDYACA-TGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQSDPSYGSCVYPS

Q9FNQ2 PLASMODESMATA CALLOSE-BINDING PROTEIN 16.4e-2249.56Show/hide
Query:  MATLVLSHSFLLFFFLIGTSAVDGAYWCVARSDATYESLQAALDYACATGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQ
        MA LVLS   LL   L G S+   A WCV ++  +   LQA LDYAC  GADC P      CF P+ +++H +YA NSFFQ+K  +PGSC+F G+AT   
Subjt:  MATLVLSHSFLLFFFLIGTSAVDGAYWCVARSDATYESLQAALDYACATGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQ

Query:  SDPSYGSCVYPSS
        SDPSY  C +P+S
Subjt:  SDPSYGSCVYPSS

Q9FZ86 PLASMODESMATA CALLOSE-BINDING PROTEIN 31.2e-2349.04Show/hide
Query:  FLLFFFLIGTSAVDGAYWCVARSDATYESLQAALDYACATGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQSDPSYGSCV
        F+L   L+  +      WCV +   +   LQ  LDYAC  GADC PI   G CF PNT+++H SYA NSFFQ+K  + G+CDFAG+AT + SDPSY +C 
Subjt:  FLLFFFLIGTSAVDGAYWCVARSDATYESLQAALDYACATGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQSDPSYGSCV

Query:  YPSS
        +P+S
Subjt:  YPSS

Q9M069 Glucan endo-1,3-beta-glucosidase 76.0e-2047.78Show/hide
Query:  VDGAYWCVARSDATYESLQAALDYACATGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQSDPSYGSCVYP
        V  + WCV +  AT E LQA+LD+AC  G DC  I   G CF PN + +HA+YA N +FQ+    P  CDF+ +AT+   +PSY +CVYP
Subjt:  VDGAYWCVARSDATYESLQAALDYACATGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQSDPSYGSCVYP

Q9SD84 PLASMODESMATA CALLOSE-BINDING PROTEIN 29.2e-2146.9Show/hide
Query:  MATLVLSHSFLLFFFLIGTSAVDGAYWCVARSDATYESLQAALDYACATGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQ
        MA LVL   +LL   + G ++   A WCV ++  +   LQ  LDYAC  GADC P    G CF P+ ++AH +YA NSFFQ+K  A  SC+F G+AT+  
Subjt:  MATLVLSHSFLLFFFLIGTSAVDGAYWCVARSDATYESLQAALDYACATGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQ

Query:  SDPSYGSCVYPSS
        +DPSY  C +PSS
Subjt:  SDPSYGSCVYPSS

Arabidopsis top hitse value%identityAlignment
AT1G18650.1 plasmodesmata callose-binding protein 38.2e-2549.04Show/hide
Query:  FLLFFFLIGTSAVDGAYWCVARSDATYESLQAALDYACATGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQSDPSYGSCV
        F+L   L+  +      WCV +   +   LQ  LDYAC  GADC PI   G CF PNT+++H SYA NSFFQ+K  + G+CDFAG+AT + SDPSY +C 
Subjt:  FLLFFFLIGTSAVDGAYWCVARSDATYESLQAALDYACATGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQSDPSYGSCV

Query:  YPSS
        +P+S
Subjt:  YPSS

AT2G05790.1 O-Glycosyl hydrolases family 17 protein8.5e-2248.42Show/hide
Query:  TSAVDGAYWCVARSDATYESLQAALDYACAT-GADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQSDPSYGSCVYPS
        + +++G  WCVA  DA  E LQ  LDYAC   GADC PI     C+ P+T++AHAS+AFNS++Q+K  A GSC F G+A +    P YG C +P+
Subjt:  TSAVDGAYWCVARSDATYESLQAALDYACAT-GADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQSDPSYGSCVYPS

AT4G13600.1 Carbohydrate-binding X8 domain superfamily protein7.7e-3966.38Show/hide
Query:  MATLVLSHSFLLFFFLIGTSAVDGAYWCVARSDATYESLQAALDYACATGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQ
        MA  + + SFLL      ++A+    WCVAR D T ++LQAALDYACA GADC PI  NGLCFLPNT+QAHASYAFNS+FQR AMAPGSC+FAG++TIA+
Subjt:  MATLVLSHSFLLFFFLIGTSAVDGAYWCVARSDATYESLQAALDYACATGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQ

Query:  SDPSYGSCVYPSSIRH
        +DPSYGSCVYP+S+R+
Subjt:  SDPSYGSCVYPSSIRH

AT5G08000.1 glucan endo-1,3-beta-glucosidase-like protein 36.5e-2246.9Show/hide
Query:  MATLVLSHSFLLFFFLIGTSAVDGAYWCVARSDATYESLQAALDYACATGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQ
        MA LVL   +LL   + G ++   A WCV ++  +   LQ  LDYAC  GADC P    G CF P+ ++AH +YA NSFFQ+K  A  SC+F G+AT+  
Subjt:  MATLVLSHSFLLFFFLIGTSAVDGAYWCVARSDATYESLQAALDYACATGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQ

Query:  SDPSYGSCVYPSS
        +DPSY  C +PSS
Subjt:  SDPSYGSCVYPSS

AT5G61130.1 plasmodesmata callose-binding protein 14.5e-2349.56Show/hide
Query:  MATLVLSHSFLLFFFLIGTSAVDGAYWCVARSDATYESLQAALDYACATGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQ
        MA LVLS   LL   L G S+   A WCV ++  +   LQA LDYAC  GADC P      CF P+ +++H +YA NSFFQ+K  +PGSC+F G+AT   
Subjt:  MATLVLSHSFLLFFFLIGTSAVDGAYWCVARSDATYESLQAALDYACATGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQ

Query:  SDPSYGSCVYPSS
        SDPSY  C +P+S
Subjt:  SDPSYGSCVYPSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCACACTTGTTCTCTCCCACTCCTTCCTCCTCTTCTTTTTCCTCATCGGAACCTCCGCCGTCGACGGCGCGTACTGGTGCGTGGCTCGCAGCGACGCCACCTACGA
ATCCCTCCAAGCCGCCCTTGACTACGCCTGCGCCACCGGGGCCGACTGTACTCCGATTCTGTTGAATGGACTCTGTTTCCTCCCCAATACCATCCAAGCCCACGCCTCCT
ACGCCTTCAACAGCTTCTTCCAGCGCAAGGCTATGGCTCCCGGCTCCTGTGACTTCGCCGGCTCCGCCACCATCGCCCAGAGTGACCCAAGTTATGGATCTTGTGTTTAT
CCATCTTCTATCAGACACCGTTGGATCAATGTGGCCGAGGCCCAGGTAGTGGTGAGATCCAACGGTGAGGATGGCATAGATTTACTTTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCACACTTGTTCTCTCCCACTCCTTCCTCCTCTTCTTTTTCCTCATCGGAACCTCCGCCGTCGACGGCGCGTACTGGTGCGTGGCTCGCAGCGACGCCACCTACGA
ATCCCTCCAAGCCGCCCTTGACTACGCCTGCGCCACCGGGGCCGACTGTACTCCGATTCTGTTGAATGGACTCTGTTTCCTCCCCAATACCATCCAAGCCCACGCCTCCT
ACGCCTTCAACAGCTTCTTCCAGCGCAAGGCTATGGCTCCCGGCTCCTGTGACTTCGCCGGCTCCGCCACCATCGCCCAGAGTGACCCAAGTTATGGATCTTGTGTTTAT
CCATCTTCTATCAGACACCGTTGGATCAATGTGGCCGAGGCCCAGGTAGTGGTGAGATCCAACGGTGAGGATGGCATAGATTTACTTTTATAA
Protein sequenceShow/hide protein sequence
MATLVLSHSFLLFFFLIGTSAVDGAYWCVARSDATYESLQAALDYACATGADCTPILLNGLCFLPNTIQAHASYAFNSFFQRKAMAPGSCDFAGSATIAQSDPSYGSCVY
PSSIRHRWINVAEAQVVVRSNGEDGIDLLL